Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01759

Experiment: Motility test in 1X LB; 1 day; inner cut; 0.3% agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01757 and MPMX20_01758 are separated by 57 nucleotidesMPMX20_01758 and MPMX20_01759 are separated by 12 nucleotidesMPMX20_01759 and MPMX20_01760 overlap by 1 nucleotides MPMX20_01757: MPMX20_01757 - Flagellar basal-body rod protein FlgG, at 1,847,958 to 1,848,740 _01757 MPMX20_01758: MPMX20_01758 - Flagellar L-ring protein, at 1,848,798 to 1,849,496 _01758 MPMX20_01759: MPMX20_01759 - Flagellar P-ring protein, at 1,849,509 to 1,850,606 _01759 MPMX20_01760: MPMX20_01760 - Peptidoglycan hydrolase FlgJ, at 1,850,606 to 1,851,559 _01760 Position (kb) 1849 1850 1851Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1848.522 kb on - strand, within MPMX20_01757at 1848.527 kb on + strand, within MPMX20_01757at 1848.527 kb on - strand, within MPMX20_01757at 1848.571 kb on + strand, within MPMX20_01757at 1848.586 kb on + strand, within MPMX20_01757at 1848.605 kb on + strand, within MPMX20_01757at 1848.632 kb on - strand, within MPMX20_01757at 1848.704 kb on - strandat 1848.734 kb on + strandat 1848.734 kb on + strandat 1848.734 kb on + strandat 1848.734 kb on + strandat 1848.742 kb on - strandat 1848.742 kb on - strandat 1848.742 kb on - strandat 1848.742 kb on - strandat 1848.742 kb on - strandat 1848.742 kb on - strandat 1848.742 kb on - strandat 1848.756 kb on + strandat 1848.764 kb on - strandat 1848.858 kb on + strandat 1848.867 kb on - strandat 1848.890 kb on - strand, within MPMX20_01758at 1848.893 kb on + strand, within MPMX20_01758at 1848.933 kb on + strand, within MPMX20_01758at 1848.941 kb on - strand, within MPMX20_01758at 1849.026 kb on + strand, within MPMX20_01758at 1849.122 kb on + strand, within MPMX20_01758at 1849.164 kb on + strand, within MPMX20_01758at 1849.175 kb on - strand, within MPMX20_01758at 1849.205 kb on - strand, within MPMX20_01758at 1849.243 kb on + strand, within MPMX20_01758at 1849.245 kb on - strand, within MPMX20_01758at 1849.249 kb on + strand, within MPMX20_01758at 1849.331 kb on - strand, within MPMX20_01758at 1849.345 kb on + strand, within MPMX20_01758at 1849.346 kb on + strand, within MPMX20_01758at 1849.364 kb on - strand, within MPMX20_01758at 1849.375 kb on + strand, within MPMX20_01758at 1849.436 kb on - strandat 1849.511 kb on + strandat 1849.570 kb on - strandat 1849.646 kb on - strand, within MPMX20_01759at 1849.725 kb on - strand, within MPMX20_01759at 1849.861 kb on + strand, within MPMX20_01759at 1849.871 kb on + strand, within MPMX20_01759at 1849.871 kb on + strand, within MPMX20_01759at 1849.879 kb on - strand, within MPMX20_01759at 1849.879 kb on - strand, within MPMX20_01759at 1849.879 kb on - strand, within MPMX20_01759at 1849.961 kb on + strand, within MPMX20_01759at 1849.967 kb on - strand, within MPMX20_01759at 1849.967 kb on - strand, within MPMX20_01759at 1849.997 kb on + strand, within MPMX20_01759at 1850.059 kb on + strand, within MPMX20_01759at 1850.059 kb on + strand, within MPMX20_01759at 1850.067 kb on - strand, within MPMX20_01759at 1850.067 kb on - strand, within MPMX20_01759at 1850.067 kb on - strand, within MPMX20_01759at 1850.095 kb on - strand, within MPMX20_01759at 1850.174 kb on + strand, within MPMX20_01759at 1850.182 kb on - strand, within MPMX20_01759at 1850.226 kb on - strand, within MPMX20_01759at 1850.295 kb on + strand, within MPMX20_01759at 1850.326 kb on + strand, within MPMX20_01759at 1850.347 kb on - strand, within MPMX20_01759at 1850.384 kb on + strand, within MPMX20_01759at 1850.470 kb on + strand, within MPMX20_01759at 1850.478 kb on - strand, within MPMX20_01759at 1850.489 kb on + strand, within MPMX20_01759at 1850.497 kb on - strandat 1850.626 kb on + strandat 1850.681 kb on + strandat 1850.681 kb on + strandat 1850.689 kb on - strandat 1850.796 kb on - strand, within MPMX20_01760at 1850.796 kb on - strand, within MPMX20_01760at 1850.843 kb on + strand, within MPMX20_01760at 1850.865 kb on + strand, within MPMX20_01760at 1850.904 kb on - strand, within MPMX20_01760at 1850.913 kb on + strand, within MPMX20_01760at 1850.991 kb on - strand, within MPMX20_01760at 1851.014 kb on + strand, within MPMX20_01760at 1851.118 kb on - strand, within MPMX20_01760at 1851.152 kb on + strand, within MPMX20_01760at 1851.163 kb on + strand, within MPMX20_01760at 1851.251 kb on - strand, within MPMX20_01760at 1851.255 kb on + strand, within MPMX20_01760at 1851.301 kb on + strand, within MPMX20_01760at 1851.301 kb on + strand, within MPMX20_01760at 1851.354 kb on + strand, within MPMX20_01760at 1851.359 kb on + strand, within MPMX20_01760at 1851.362 kb on - strand, within MPMX20_01760at 1851.362 kb on - strand, within MPMX20_01760at 1851.400 kb on + strand, within MPMX20_01760at 1851.408 kb on + strand, within MPMX20_01760at 1851.431 kb on - strand, within MPMX20_01760at 1851.517 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; inner cut; 0.3% agar
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1,848,522 - MPMX20_01757 0.72 -0.1
1,848,527 + MPMX20_01757 0.73 -0.8
1,848,527 - MPMX20_01757 0.73 -1.2
1,848,571 + MPMX20_01757 0.78 -1.3
1,848,586 + MPMX20_01757 0.80 -0.5
1,848,605 + MPMX20_01757 0.83 -0.9
1,848,632 - MPMX20_01757 0.86 -1.7
1,848,704 - +1.5
1,848,734 + +0.8
1,848,734 + -0.8
1,848,734 + -1.0
1,848,734 + +1.4
1,848,742 - -0.2
1,848,742 - -0.3
1,848,742 - -3.4
1,848,742 - -0.9
1,848,742 - -1.4
1,848,742 - -2.6
1,848,742 - -1.9
1,848,756 + +2.1
1,848,764 - -1.7
1,848,858 + +0.1
1,848,867 - +0.4
1,848,890 - MPMX20_01758 0.13 -1.6
1,848,893 + MPMX20_01758 0.14 -0.2
1,848,933 + MPMX20_01758 0.19 -0.7
1,848,941 - MPMX20_01758 0.20 -1.2
1,849,026 + MPMX20_01758 0.33 -0.7
1,849,122 + MPMX20_01758 0.46 -0.7
1,849,164 + MPMX20_01758 0.52 -1.0
1,849,175 - MPMX20_01758 0.54 -3.4
1,849,205 - MPMX20_01758 0.58 -0.9
1,849,243 + MPMX20_01758 0.64 -0.7
1,849,245 - MPMX20_01758 0.64 -0.5
1,849,249 + MPMX20_01758 0.65 -1.3
1,849,331 - MPMX20_01758 0.76 -0.7
1,849,345 + MPMX20_01758 0.78 -1.5
1,849,346 + MPMX20_01758 0.78 -0.5
1,849,364 - MPMX20_01758 0.81 -2.0
1,849,375 + MPMX20_01758 0.83 -1.1
1,849,436 - -0.2
1,849,511 + -0.5
1,849,570 - -1.0
1,849,646 - MPMX20_01759 0.12 -2.7
1,849,725 - MPMX20_01759 0.20 -1.8
1,849,861 + MPMX20_01759 0.32 -1.4
1,849,871 + MPMX20_01759 0.33 -2.3
1,849,871 + MPMX20_01759 0.33 -1.9
1,849,879 - MPMX20_01759 0.34 -1.2
1,849,879 - MPMX20_01759 0.34 -1.1
1,849,879 - MPMX20_01759 0.34 -2.5
1,849,961 + MPMX20_01759 0.41 -3.0
1,849,967 - MPMX20_01759 0.42 -0.1
1,849,967 - MPMX20_01759 0.42 -1.2
1,849,997 + MPMX20_01759 0.44 -0.9
1,850,059 + MPMX20_01759 0.50 -1.6
1,850,059 + MPMX20_01759 0.50 +1.1
1,850,067 - MPMX20_01759 0.51 -0.8
1,850,067 - MPMX20_01759 0.51 -1.7
1,850,067 - MPMX20_01759 0.51 -1.9
1,850,095 - MPMX20_01759 0.53 -3.6
1,850,174 + MPMX20_01759 0.61 -0.9
1,850,182 - MPMX20_01759 0.61 -0.1
1,850,226 - MPMX20_01759 0.65 +0.4
1,850,295 + MPMX20_01759 0.72 -2.1
1,850,326 + MPMX20_01759 0.74 -1.9
1,850,347 - MPMX20_01759 0.76 -2.1
1,850,384 + MPMX20_01759 0.80 -1.9
1,850,470 + MPMX20_01759 0.88 -0.6
1,850,478 - MPMX20_01759 0.88 -0.5
1,850,489 + MPMX20_01759 0.89 +2.1
1,850,497 - -0.0
1,850,626 + +0.4
1,850,681 + -0.5
1,850,681 + -1.0
1,850,689 - -1.2
1,850,796 - MPMX20_01760 0.20 -1.1
1,850,796 - MPMX20_01760 0.20 +0.3
1,850,843 + MPMX20_01760 0.25 -0.8
1,850,865 + MPMX20_01760 0.27 +0.2
1,850,904 - MPMX20_01760 0.31 -2.1
1,850,913 + MPMX20_01760 0.32 -2.1
1,850,991 - MPMX20_01760 0.40 +0.1
1,851,014 + MPMX20_01760 0.43 -1.9
1,851,118 - MPMX20_01760 0.54 -1.1
1,851,152 + MPMX20_01760 0.57 -0.3
1,851,163 + MPMX20_01760 0.58 -1.2
1,851,251 - MPMX20_01760 0.68 -0.3
1,851,255 + MPMX20_01760 0.68 -1.5
1,851,301 + MPMX20_01760 0.73 -2.7
1,851,301 + MPMX20_01760 0.73 +0.4
1,851,354 + MPMX20_01760 0.78 -1.3
1,851,359 + MPMX20_01760 0.79 -0.9
1,851,362 - MPMX20_01760 0.79 -1.2
1,851,362 - MPMX20_01760 0.79 -2.7
1,851,400 + MPMX20_01760 0.83 +1.0
1,851,408 + MPMX20_01760 0.84 +1.1
1,851,431 - MPMX20_01760 0.86 -2.1
1,851,517 + -0.5

Or see this region's nucleotide sequence