Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00777

Experiment: Motility test in 1X LB; 1 day; inner cut; 0.3% agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00775 and MPMX20_00776 overlap by 4 nucleotidesMPMX20_00776 and MPMX20_00777 are separated by 15 nucleotidesMPMX20_00777 and MPMX20_00778 overlap by 14 nucleotides MPMX20_00775: MPMX20_00775 - Ribosomal RNA small subunit methyltransferase H, at 809,168 to 810,109 _00775 MPMX20_00776: MPMX20_00776 - Cell division protein FtsL, at 810,106 to 810,471 _00776 MPMX20_00777: MPMX20_00777 - Peptidoglycan D,D-transpeptidase FtsI, at 810,487 to 812,253 _00777 MPMX20_00778: MPMX20_00778 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase, at 812,240 to 813,727 _00778 Position (kb) 810 811 812 813Strain fitness (log2 ratio) -2 -1 0 1at 809.569 kb on + strand, within MPMX20_00775at 809.620 kb on + strand, within MPMX20_00775at 809.711 kb on + strand, within MPMX20_00775at 809.789 kb on + strand, within MPMX20_00775at 810.072 kb on + strandat 810.486 kb on + strandat 812.232 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; inner cut; 0.3% agar
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809,569 + MPMX20_00775 0.43 -0.5
809,620 + MPMX20_00775 0.48 -0.5
809,711 + MPMX20_00775 0.58 -0.7
809,789 + MPMX20_00775 0.66 -2.1
810,072 + -1.2
810,486 + +0.4
812,232 + -0.6

Or see this region's nucleotide sequence