Experiment: 7H9 with Clarithromycin 0.967 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv3764c and Rv3765c are separated by 70 nucleotides Rv3765c and Rv3766 are separated by 508 nucleotides
Rv3764c: Rv3764c - Possible two component sensor kinase TcrY, at 4,209,582 to 4,211,009
Rv3764c
Rv3765c: Rv3765c - Probable two component transcriptional regulatory protein TcrX, at 4,211,080 to 4,211,784
Rv3765c
Rv3766: Rv3766 - Hypothetical protein, at 4,212,293 to 4,212,982
Rv3766
Position (kb) 4211
4212 Strain fitness (log2 ratio) -1
0
1
2 at 4211.102 kb on + strand at 4211.102 kb on + strand at 4211.165 kb on + strand, within Rv3765c at 4211.174 kb on + strand, within Rv3765c at 4211.174 kb on + strand, within Rv3765c at 4211.174 kb on + strand, within Rv3765c at 4211.175 kb on - strand, within Rv3765c at 4211.175 kb on - strand, within Rv3765c at 4211.175 kb on - strand, within Rv3765c at 4211.175 kb on - strand, within Rv3765c at 4211.210 kb on + strand, within Rv3765c at 4211.417 kb on - strand, within Rv3765c at 4211.452 kb on - strand, within Rv3765c at 4211.468 kb on + strand, within Rv3765c at 4211.468 kb on + strand, within Rv3765c at 4211.468 kb on + strand, within Rv3765c at 4211.468 kb on + strand, within Rv3765c at 4211.498 kb on - strand, within Rv3765c at 4211.499 kb on + strand, within Rv3765c at 4211.499 kb on + strand, within Rv3765c at 4211.533 kb on + strand, within Rv3765c at 4211.533 kb on + strand, within Rv3765c at 4211.830 kb on + strand at 4211.866 kb on + strand at 4211.867 kb on - strand at 4211.867 kb on - strand at 4211.934 kb on - strand at 4211.963 kb on - strand at 4212.116 kb on - strand at 4212.258 kb on - strand at 4212.339 kb on - strand at 4212.542 kb on + strand, within Rv3766 at 4212.615 kb on - strand, within Rv3766 at 4212.677 kb on - strand, within Rv3766 at 4212.741 kb on + strand, within Rv3766
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Clarithromycin 0.967 ug/mL remove 4,211,102 + +0.6 4,211,102 + -0.6 4,211,165 + Rv3765c 0.12 +0.0 4,211,174 + Rv3765c 0.13 +0.4 4,211,174 + Rv3765c 0.13 -0.2 4,211,174 + Rv3765c 0.13 +0.6 4,211,175 - Rv3765c 0.13 +0.0 4,211,175 - Rv3765c 0.13 +0.1 4,211,175 - Rv3765c 0.13 -0.5 4,211,175 - Rv3765c 0.13 +0.9 4,211,210 + Rv3765c 0.18 -0.2 4,211,417 - Rv3765c 0.48 -0.3 4,211,452 - Rv3765c 0.53 +0.7 4,211,468 + Rv3765c 0.55 -0.2 4,211,468 + Rv3765c 0.55 -0.5 4,211,468 + Rv3765c 0.55 -0.4 4,211,468 + Rv3765c 0.55 +0.0 4,211,498 - Rv3765c 0.59 -0.3 4,211,499 + Rv3765c 0.59 -1.1 4,211,499 + Rv3765c 0.59 +0.2 4,211,533 + Rv3765c 0.64 +1.4 4,211,533 + Rv3765c 0.64 -0.0 4,211,830 + +0.6 4,211,866 + -0.3 4,211,867 - +0.4 4,211,867 - +0.2 4,211,934 - -0.1 4,211,963 - -0.2 4,212,116 - +0.2 4,212,258 - -0.2 4,212,339 - +0.5 4,212,542 + Rv3766 0.36 +0.0 4,212,615 - Rv3766 0.47 -0.1 4,212,677 - Rv3766 0.56 +1.9 4,212,741 + Rv3766 0.65 -0.1
Or see this region's nucleotide sequence