Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2091c

Experiment: 7H9 with Clarithromycin 0.967 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clarithromycin 0.967 ug/mL
2,347,920	+		Rv2090	0.46	-0.3
2,348,087	+		Rv2090	0.60	+0.4
2,348,266	-		Rv2090	0.76	-1.0
2,348,286	+		Rv2090	0.77	-0.7
2,348,287	-		Rv2090	0.77	-0.6
2,348,340	+		Rv2090	0.82	+1.7
2,348,340	+		Rv2090	0.82	+0.1
2,348,340	+		Rv2090	0.82	+0.3
2,348,341	-		Rv2090	0.82	-0.3
2,348,345	-		Rv2090	0.82	+0.2
2,348,345	-		Rv2090	0.82	+0.3
2,348,345	-		Rv2090	0.82	+0.9
2,348,345	-		Rv2090	0.82	+0.5
2,348,370	-		Rv2090	0.84	-1.1
2,348,560	-				-0.3
2,348,560	-				+0.6
2,348,580	+				+0.6
2,348,580	+				-1.4
2,348,581	-				-0.5
2,348,773	+		Rv2091c	0.29	-0.7
2,348,829	-		Rv2091c	0.37	-0.8
2,348,919	+		Rv2091c	0.49	-0.1
2,348,976	+		Rv2091c	0.57	-0.8
2,348,976	+		Rv2091c	0.57	+0.9
2,348,994	+		Rv2091c	0.59	-0.6
2,349,012	+		Rv2091c	0.62	+0.4
2,349,021	+		Rv2091c	0.63	-0.7
2,349,021	+		Rv2091c	0.63	-0.6
2,349,022	-		Rv2091c	0.63	-1.3
2,349,135	+		Rv2091c	0.79	-0.3
2,349,320	-				-1.1
2,349,378	+				-0.4
2,349,734	+		Rv2092c	0.15	+1.5
2,349,734	+		Rv2092c	0.15	-0.6
2,349,735	-		Rv2092c	0.15	-1.1
2,349,795	+		Rv2092c	0.17	-1.7
2,349,795	+		Rv2092c	0.17	-1.0
2,349,799	+		Rv2092c	0.17	-0.9
2,349,799	+		Rv2092c	0.17	-0.4
2,349,976	+		Rv2092c	0.24	-0.3
2,350,003	+		Rv2092c	0.25	-0.7
2,350,003	+		Rv2092c	0.25	-0.7
2,350,004	-		Rv2092c	0.25	-1.1
2,350,004	-		Rv2092c	0.25	-0.9
2,350,007	+		Rv2092c	0.25	-0.1
2,350,008	-		Rv2092c	0.25	+0.0
2,350,050	+		Rv2092c	0.26	-0.9
2,350,050	+		Rv2092c	0.26	-0.8
2,350,050	+		Rv2092c	0.26	-0.7
2,350,051	-		Rv2092c	0.26	-0.1
2,350,051	-		Rv2092c	0.26	+3.5
2,350,143	+		Rv2092c	0.30	-0.7
2,350,143	+		Rv2092c	0.30	-0.7
2,350,143	+		Rv2092c	0.30	-0.8
2,350,144	-		Rv2092c	0.30	+1.9