Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3328c

Experiment: 7H9 with Clarithromycin 0.967 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clarithromycin 0.967 ug/mL
3,712,807	+		Rv3327	0.62	+0.2
3,712,814	+		Rv3327	0.62	+0.8
3,712,848	+		Rv3327	0.64	-0.1
3,712,856	-		Rv3327	0.65	-0.3
3,712,856	-		Rv3327	0.65	+0.6
3,712,884	+		Rv3327	0.66	-0.7
3,713,180	+		Rv3327	0.84	+1.2
3,713,181	-		Rv3327	0.84	-0.4
3,713,327	+				-0.3
3,713,328	-				-0.0
3,713,659	-		Rv3328c	0.28	-0.3
3,714,112	+		Rv3328c	0.76	+0.1
3,714,112	+		Rv3328c	0.76	+0.1
3,714,112	+		Rv3328c	0.76	+0.5
3,714,113	-		Rv3328c	0.77	-2.0
3,714,281	-				+0.0
3,714,352	+				-0.6
3,714,353	-				-0.4
3,714,482	+				-0.2
3,714,482	+				-0.0
3,714,482	+				-0.1
3,714,483	-				-0.7
3,714,596	+		Rv3329	0.15	+2.1
3,714,658	-		Rv3329	0.20	+0.0
3,714,658	-		Rv3329	0.20	-0.1
3,714,658	-		Rv3329	0.20	-0.7
3,714,725	+		Rv3329	0.25	+0.5
3,714,725	+		Rv3329	0.25	-0.8
3,714,726	-		Rv3329	0.25	-0.3
3,715,079	+		Rv3329	0.52	+0.8
3,715,160	+		Rv3329	0.58	+0.1