Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3236c

Experiment: 7H9 with Clarithromycin 0.967 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clarithromycin 0.967 ug/mL
3,611,122	+				+1.3
3,611,123	-				-0.7
3,611,123	-				+0.3
3,611,123	-				+0.9
3,611,123	-				-0.9
3,611,123	-				+0.1
3,611,123	-				-0.0
3,611,123	-				-0.1
3,611,152	+				-0.4
3,611,404	+		Rv3235	0.16	-0.7
3,611,529	+		Rv3235	0.36	-0.5
3,611,840	+		Rv3235	0.84	-1.9
3,611,840	+		Rv3235	0.84	+0.4
3,611,840	+		Rv3235	0.84	-0.3
3,611,841	-		Rv3235	0.84	-0.1
3,611,841	-		Rv3235	0.84	-0.5
3,611,841	-		Rv3235	0.84	+0.8
3,611,961	-				+0.1
3,611,971	+				+0.4
3,611,972	-				+0.1
3,612,044	+				+0.5
3,612,044	+				+0.5
3,612,045	-				+0.2
3,612,623	+		Rv3236c	0.57	-0.2
3,612,741	-		Rv3236c	0.68	+1.5
3,613,288	+		Rv3237c	0.35	-0.2
3,613,289	-		Rv3237c	0.35	-0.7
3,613,319	-		Rv3237c	0.41	-0.5
3,613,319	-		Rv3237c	0.41	-1.3
3,613,486	-		Rv3237c	0.76	-0.5
3,613,546	-		Rv3237c	0.88	-2.1
3,613,561	-				+0.1
3,613,603	+				-0.6
3,613,603	+				+0.8
3,613,603	+				+0.1
3,613,603	+				-0.3
3,613,636	+				+0.1
3,613,636	+				-0.2
3,613,669	+				+0.1
3,613,669	+				-0.0
3,613,670	-				-0.0
3,613,745	+		Rv3238c	0.11	-0.4
3,613,745	+		Rv3238c	0.11	-0.1
3,613,783	-		Rv3238c	0.16	-0.4
3,613,921	-		Rv3238c	0.35	+0.3
3,613,944	+		Rv3238c	0.38	+0.3
3,613,944	+		Rv3238c	0.38	-0.3
3,613,945	-		Rv3238c	0.38	-0.2
3,613,945	-		Rv3238c	0.38	+2.9
3,613,955	+		Rv3238c	0.40	-0.8
3,613,956	-		Rv3238c	0.40	-0.1
3,614,101	-		Rv3238c	0.59	-0.5
3,614,101	-		Rv3238c	0.59	-0.0