Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1912c

Experiment: 7H9 with Clarithromycin 0.967 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clarithromycin 0.967 ug/mL
2,157,135	+		Rv1910c	0.72	-0.3
2,157,162	-		Rv1910c	0.77	-0.3
2,157,162	-		Rv1910c	0.77	-0.1
2,157,555	-		Rv1911c	0.29	-0.0
2,157,663	-		Rv1911c	0.46	-0.9
2,157,663	-		Rv1911c	0.46	-0.0
2,157,878	+		Rv1911c	0.82	-0.2
2,157,878	+		Rv1911c	0.82	+0.2
2,157,959	-				-0.6
2,158,010	+				-0.2
2,158,010	+				-0.5
2,158,011	-				+0.9
2,158,013	+				-0.7
2,158,436	+		Rv1912c	0.35	+0.5
2,158,436	+		Rv1912c	0.35	+0.0
2,158,437	-		Rv1912c	0.35	+0.3
2,158,688	+		Rv1912c	0.60	+0.7
2,159,091	+				-0.2
2,159,145	+				+0.2
2,159,179	-				+0.1
2,159,288	+		Rv1913	0.13	+0.1
2,159,289	-		Rv1913	0.13	-0.3
2,159,472	-		Rv1913	0.37	-0.1
2,159,578	+		Rv1913	0.51	-1.0
2,159,793	-		Rv1913	0.80	+0.2
2,159,922	+				+0.1
2,159,923	-				+0.6
2,159,923	-				+0.2