Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0088

Experiment: 7H9 with Clarithromycin 0.967 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clarithromycin 0.967 ug/mL
96,513	+		Rv0087	0.74	+0.3
96,974	+				+1.4
96,981	-				-0.2
96,981	-				-0.1
97,399	+		Rv0088	0.70	+0.4
97,581	+				+0.3
97,668	+				+0.3
97,707	+				-0.3
97,707	+				+0.9
97,888	+		Rv0089	0.22	-1.1
97,893	+		Rv0089	0.23	-0.3
98,261	-		Rv0089	0.85	+0.8
98,397	-				+0.2
98,437	+				-0.1
98,468	+				-0.1
98,468	+				-0.3
98,469	-				+1.5
98,469	-				+0.1