Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3041c

Experiment: 7H9 with Delamanid 0.236 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Delamanid 0.236 ug/mL
3,400,344	+		Rv3040c	0.18	+0.2
3,400,345	-		Rv3040c	0.18	+0.3
3,400,493	-		Rv3040c	0.35	+2.5
3,400,512	-		Rv3040c	0.37	-0.3
3,400,512	-		Rv3040c	0.37	-0.6
3,401,105	-				-0.3
3,401,341	-		Rv3041c	0.33	+0.2
3,401,447	-		Rv3041c	0.45	-0.1
3,401,507	-		Rv3041c	0.52	+0.4
3,401,934	+				-0.7
3,401,935	-				-0.4