Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0974c
Experiment: 7H9 with Delamanid 0.236 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Delamanid 0.236 ug/mL |
---|---|---|---|---|---|
remove | |||||
1,084,912 | + | Rv0973c | 0.58 | +2.0 | |
1,086,102 | + | Rv0974c | 0.22 | -0.3 | |
1,086,214 | - | Rv0974c | 0.29 | +0.6 | |
1,087,466 | + | Rv0975c | 0.10 | +1.0 | |
1,087,467 | - | Rv0975c | 0.10 | +0.3 | |
1,087,604 | + | Rv0975c | 0.22 | -0.1 | |
1,088,027 | + | Rv0975c | 0.59 | -0.6 | |
1,088,027 | + | Rv0975c | 0.59 | +1.0 | |
1,088,028 | - | Rv0975c | 0.59 | +0.3 | |
1,088,083 | + | Rv0975c | 0.64 | +0.8 | |
1,088,084 | - | Rv0975c | 0.64 | -0.4 | |
1,088,240 | + | Rv0975c | 0.78 | +0.8 | |
1,088,241 | - | Rv0975c | 0.78 | -0.8 | |
1,088,241 | - | Rv0975c | 0.78 | -1.6 |
Or see this region's nucleotide sequence