Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1257c

Experiment: 7H9 with Delamanid 0.236 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Delamanid 0.236 ug/mL
1,403,905	+		Rv1256c	0.43	-0.9
1,404,141	-		Rv1256c	0.62	-0.2
1,404,176	-		Rv1256c	0.65	-0.5
1,404,464	+		Rv1256c	0.89	-2.1
1,404,464	+		Rv1256c	0.89	+0.5
1,404,467	+		Rv1256c	0.89	+0.5
1,404,468	-		Rv1256c	0.89	+0.1
1,404,474	-		Rv1256c	0.89	-0.0
1,404,805	+				-0.1
1,404,944	-		Rv1257c	0.17	-0.3
1,405,596	+		Rv1257c	0.64	-0.2
1,405,596	+		Rv1257c	0.64	-0.4
1,405,597	-		Rv1257c	0.64	+0.4
1,405,597	-		Rv1257c	0.64	-0.2
1,405,601	-		Rv1257c	0.65	-0.0
1,405,619	-		Rv1257c	0.66	+0.1
1,405,747	+		Rv1257c	0.75	-0.4
1,405,748	-		Rv1257c	0.75	+0.2
1,406,017	+				+1.6
1,406,298	-		Rv1258c	0.17	+1.8
1,406,334	-		Rv1258c	0.20	+1.7
1,406,334	-		Rv1258c	0.20	+0.2
1,406,340	+		Rv1258c	0.21	-0.4
1,406,340	+		Rv1258c	0.21	-0.6
1,406,341	-		Rv1258c	0.21	-0.4
1,406,341	-		Rv1258c	0.21	-0.1
1,406,341	-		Rv1258c	0.21	-0.2
1,406,344	+		Rv1258c	0.21	-0.0
1,406,344	+		Rv1258c	0.21	+1.9
1,406,345	-		Rv1258c	0.21	+0.9
1,406,345	-		Rv1258c	0.21	-0.2
1,406,345	-		Rv1258c	0.21	-0.1
1,406,347	-		Rv1258c	0.21	+0.3
1,406,347	-		Rv1258c	0.21	-0.2
1,406,367	+		Rv1258c	0.23	-1.0
1,406,368	-		Rv1258c	0.23	-0.4
1,406,508	+		Rv1258c	0.34	+0.2
1,406,626	-		Rv1258c	0.43	-0.3
1,406,626	-		Rv1258c	0.43	-1.0
1,406,812	+		Rv1258c	0.58	-0.1
1,406,813	-		Rv1258c	0.58	-1.2
1,406,878	+		Rv1258c	0.63	-0.2
1,406,878	+		Rv1258c	0.63	+3.2