Strain Fitness in Rahnella sp. WP5 around EX31_RS13540

Experiment: NL-CCM; vial

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; vial
139,423	+		EX31_RS13530	0.78	-0.6
139,423	+		EX31_RS13530	0.78	-0.6
139,424	-		EX31_RS13530	0.78	+0.6
139,424	-		EX31_RS13530	0.78	-0.3
139,468	-		EX31_RS13530	0.82	+0.5
139,506	+		EX31_RS13530	0.85	+0.2
139,506	+		EX31_RS13530	0.85	-1.3
139,507	-		EX31_RS13530	0.85	-0.5
139,543	+		EX31_RS13530	0.88	+0.5
139,543	+		EX31_RS13530	0.88	-0.4
139,543	+		EX31_RS13530	0.88	-0.1
139,543	+		EX31_RS13530	0.88	+0.5
139,543	+		EX31_RS13530	0.88	+0.3
139,543	+		EX31_RS13530	0.88	+0.5
139,543	+		EX31_RS13530	0.88	-0.3
139,543	+		EX31_RS13530	0.88	+0.4
139,543	+		EX31_RS13530	0.88	-0.1
139,543	+		EX31_RS13530	0.88	-0.6
139,544	-		EX31_RS13530	0.88	+0.4
139,544	-		EX31_RS13530	0.88	+0.2
139,544	-		EX31_RS13530	0.88	-0.3
139,544	-		EX31_RS13530	0.88	+0.0
139,544	-		EX31_RS13530	0.88	+0.1
139,545	+		EX31_RS13530	0.88	-0.5
139,545	+		EX31_RS13530	0.88	-0.1
139,546	-		EX31_RS13530	0.88	-0.3
139,558	+		EX31_RS13530	0.89	-1.0
139,605	+				-0.5
139,660	+				+0.1
139,661	-				+0.0
139,672	+				+0.6
139,672	+				+0.6
139,672	+				-0.6
139,672	+				+0.2
139,673	-				-0.9
139,673	-				-0.2
139,673	-				+0.2
139,673	-				+0.7
139,673	-				-1.4
139,673	-				-1.5
139,673	-				-0.2
139,673	-				+0.6
139,676	+				+0.0
139,677	-				+0.6
139,677	-				+0.9
139,720	+				+0.4
139,727	+				-0.3
139,727	+				+0.0
139,727	+				+0.3
139,727	+				+0.2
139,727	+				+0.0
139,728	-				+0.9
139,728	-				+1.3
139,728	-				-1.1
139,728	-				-0.3
139,729	+				+0.1
139,729	+				-0.9
139,729	+				+1.3
139,730	-				-1.5
139,730	-				-0.0
139,730	-				+0.1
139,849	+				+0.6
139,849	+				-0.2
139,849	+				-0.3
139,849	+				+0.1
139,849	+				-0.9
139,849	+				+1.2
139,850	-				-0.1
139,850	-				-2.1
139,850	-				+0.1
139,860	+				-0.9
139,861	-				+0.2
139,861	-				-1.3
139,861	-				-0.2
139,915	-				-0.4
139,921	+				+0.3
139,922	-				-0.4
139,922	-				-1.0
139,922	-				-0.0
139,922	-				-1.0
139,922	-				+0.6
139,922	-				-0.0
139,927	+				+0.7
139,927	+				+0.3
139,930	+				+0.4
139,930	+				+0.6
139,930	+				+0.1
139,930	+				-0.3
139,930	+				-0.0
139,930	+				-0.2
139,931	-				+0.4
139,931	-				-0.3
139,931	-				+0.4
139,931	-				+0.3
139,962	+				-0.2
139,963	-				+0.5
139,974	+				-0.3
139,974	+				-0.2
139,975	-				-0.1
139,975	-				+1.2
139,975	-				+0.9
139,975	-				-1.5
139,979	+				+0.2
139,980	-				-0.6
140,003	+		EX31_RS13535	0.15	+0.1
140,099	+		EX31_RS13535	0.46	-1.4
140,099	+		EX31_RS13535	0.46	-0.5
140,099	+		EX31_RS13535	0.46	-0.4
140,099	+		EX31_RS13535	0.46	-0.7
140,099	+		EX31_RS13535	0.46	+0.5
140,099	+		EX31_RS13535	0.46	-0.1
140,100	-		EX31_RS13535	0.47	-0.3
140,100	-		EX31_RS13535	0.47	-0.0
140,100	-		EX31_RS13535	0.47	-2.3
140,179	+		EX31_RS13535	0.73	-0.8
140,179	+		EX31_RS13535	0.73	+0.3
140,179	+		EX31_RS13535	0.73	+0.5
140,180	-		EX31_RS13535	0.73	-0.2
140,180	-		EX31_RS13535	0.73	+0.2
140,180	-		EX31_RS13535	0.73	+0.7
140,180	-		EX31_RS13535	0.73	-0.0
140,190	+		EX31_RS13535	0.76	-0.1
140,191	-		EX31_RS13535	0.76	-0.2
140,200	+		EX31_RS13535	0.79	-1.6
140,200	+		EX31_RS13535	0.79	+0.1
140,265	+				+0.1
140,265	+				-0.0
140,265	+				-1.0
140,265	+				+0.2
140,265	+				-0.1
140,265	+				-1.9
140,266	-				+0.4
140,266	-				-0.1
140,266	-				-0.6
140,266	-				+0.1
140,304	+				-0.7
140,312	-				-0.3
140,454	-				-0.5
140,454	-				-1.5
140,454	-				-0.6
140,454	-				-0.2
140,477	+				-0.0
140,478	-				-1.3
140,478	-				-0.3
140,583	-				-0.7
140,584	+				+0.1
140,584	+				-0.0
140,584	+				+0.4
140,585	-				-1.1
140,691	-		EX31_RS13540	0.11	+0.2
140,704	-		EX31_RS13540	0.11	-0.5
140,720	-		EX31_RS13540	0.12	-0.6
140,734	+		EX31_RS13540	0.12	-0.4
140,734	+		EX31_RS13540	0.12	-0.4
140,734	+		EX31_RS13540	0.12	+0.3
140,734	+		EX31_RS13540	0.12	-0.3
140,734	+		EX31_RS13540	0.12	-0.3
140,734	+		EX31_RS13540	0.12	+0.1
140,735	-		EX31_RS13540	0.12	+1.7
140,735	-		EX31_RS13540	0.12	+0.6
140,735	-		EX31_RS13540	0.12	+0.5
140,735	-		EX31_RS13540	0.12	+2.3
140,735	-		EX31_RS13540	0.12	+0.4
140,735	-		EX31_RS13540	0.12	+1.0
140,738	+		EX31_RS13540	0.12	-0.3
140,739	-		EX31_RS13540	0.12	-0.5
140,739	-		EX31_RS13540	0.12	-0.7
140,739	-		EX31_RS13540	0.12	+0.0
140,739	-		EX31_RS13540	0.12	+2.0
140,739	-		EX31_RS13540	0.12	-0.1
140,739	-		EX31_RS13540	0.12	+1.2
140,755	+		EX31_RS13540	0.13	+0.8
140,755	+		EX31_RS13540	0.13	-1.8
140,756	-		EX31_RS13540	0.13	+0.3
140,867	+		EX31_RS13540	0.17	-0.1
140,868	-		EX31_RS13540	0.17	-0.2
140,986	-		EX31_RS13540	0.22	+0.0
141,028	-		EX31_RS13540	0.23	-0.4
141,128	+		EX31_RS13540	0.27	+0.3
141,128	+		EX31_RS13540	0.27	-1.7
141,128	+		EX31_RS13540	0.27	+0.1
141,128	+		EX31_RS13540	0.27	-2.3
141,128	+		EX31_RS13540	0.27	-0.1
141,128	+		EX31_RS13540	0.27	+0.7
141,128	+		EX31_RS13540	0.27	+1.6
141,128	+		EX31_RS13540	0.27	-0.4
141,129	-		EX31_RS13540	0.27	+0.1
141,129	-		EX31_RS13540	0.27	-0.3
141,129	-		EX31_RS13540	0.27	-0.1
141,129	-		EX31_RS13540	0.27	+1.4
141,129	-		EX31_RS13540	0.27	+0.2
141,382	+		EX31_RS13540	0.37	-0.0
141,382	+		EX31_RS13540	0.37	-0.3
141,382	+		EX31_RS13540	0.37	+1.5
141,382	+		EX31_RS13540	0.37	-0.4
141,382	+		EX31_RS13540	0.37	-0.7
141,383	-		EX31_RS13540	0.37	-0.1
141,383	-		EX31_RS13540	0.37	+0.9
141,442	+		EX31_RS13540	0.39	-0.1
141,442	+		EX31_RS13540	0.39	-0.6
141,443	-		EX31_RS13540	0.39	-0.9
141,448	+		EX31_RS13540	0.39	-1.3
141,448	+		EX31_RS13540	0.39	-0.8
141,448	+		EX31_RS13540	0.39	-0.8
141,449	-		EX31_RS13540	0.39	+0.1
141,449	-		EX31_RS13540	0.39	-0.6
141,497	-		EX31_RS13540	0.41	-1.2
141,515	+		EX31_RS13540	0.42	+0.1
141,515	+		EX31_RS13540	0.42	-1.2
141,516	-		EX31_RS13540	0.42	-0.7
141,562	+		EX31_RS13540	0.44	+0.8
141,562	+		EX31_RS13540	0.44	+0.4
141,563	-		EX31_RS13540	0.44	+0.3
141,563	-		EX31_RS13540	0.44	+0.5
141,643	+		EX31_RS13540	0.47	-0.1
141,643	+		EX31_RS13540	0.47	-0.6
141,682	+		EX31_RS13540	0.48	+0.6
141,683	-		EX31_RS13540	0.48	+0.5
141,690	-		EX31_RS13540	0.49	+0.2
141,700	+		EX31_RS13540	0.49	+0.3
141,700	+		EX31_RS13540	0.49	-0.3
141,701	-		EX31_RS13540	0.49	-0.2
141,701	-		EX31_RS13540	0.49	+2.0
141,709	+		EX31_RS13540	0.49	-0.4
141,709	+		EX31_RS13540	0.49	-0.4
141,769	+		EX31_RS13540	0.52	+0.1
141,769	+		EX31_RS13540	0.52	-0.0
141,770	-		EX31_RS13540	0.52	-0.1
141,770	-		EX31_RS13540	0.52	+1.0
141,770	-		EX31_RS13540	0.52	+0.0
141,774	+		EX31_RS13540	0.52	-1.5
141,774	+		EX31_RS13540	0.52	-0.1
141,775	-		EX31_RS13540	0.52	+0.5
141,775	-		EX31_RS13540	0.52	-0.5
141,834	-		EX31_RS13540	0.54	-0.0
142,098	+		EX31_RS13540	0.64	+0.3
142,216	+		EX31_RS13540	0.69	+0.2
142,216	+		EX31_RS13540	0.69	+0.2
142,216	+		EX31_RS13540	0.69	-0.1
142,216	+		EX31_RS13540	0.69	-1.0
142,216	+		EX31_RS13540	0.69	+0.3
142,216	+		EX31_RS13540	0.69	-1.5
142,216	+		EX31_RS13540	0.69	-0.7
142,216	+		EX31_RS13540	0.69	+0.1
142,216	+		EX31_RS13540	0.69	-2.6
142,216	+		EX31_RS13540	0.69	+0.5
142,216	+		EX31_RS13540	0.69	+0.3
142,216	+		EX31_RS13540	0.69	-0.4
142,217	-		EX31_RS13540	0.69	-0.6
142,217	-		EX31_RS13540	0.69	-0.6
142,217	-		EX31_RS13540	0.69	+0.5
142,217	-		EX31_RS13540	0.69	+0.3
142,217	-		EX31_RS13540	0.69	+0.4
142,217	-		EX31_RS13540	0.69	-0.5
142,217	-		EX31_RS13540	0.69	-0.4
142,217	-		EX31_RS13540	0.69	-0.3
142,217	-		EX31_RS13540	0.69	+0.3
142,275	-		EX31_RS13540	0.71	-0.4
142,368	+		EX31_RS13540	0.74	-0.4
142,368	+		EX31_RS13540	0.74	+0.2
142,369	-		EX31_RS13540	0.74	-0.7
142,441	+		EX31_RS13540	0.77	+1.7
142,441	+		EX31_RS13540	0.77	-0.0
142,441	+		EX31_RS13540	0.77	-0.8
142,442	-		EX31_RS13540	0.77	-0.7
142,442	-		EX31_RS13540	0.77	-0.3
142,442	-		EX31_RS13540	0.77	-0.6
142,442	-		EX31_RS13540	0.77	+0.6
142,442	-		EX31_RS13540	0.77	-0.0
142,442	-		EX31_RS13540	0.77	+0.5
142,446	-		EX31_RS13540	0.77	+0.5
142,446	-		EX31_RS13540	0.77	+0.5
142,482	+		EX31_RS13540	0.79	-0.6
142,483	-		EX31_RS13540	0.79	-0.5
142,483	-		EX31_RS13540	0.79	+0.9
142,486	+		EX31_RS13540	0.79	+0.6
142,486	+		EX31_RS13540	0.79	-0.2
142,487	-		EX31_RS13540	0.79	+0.6
142,487	-		EX31_RS13540	0.79	+0.2
142,487	-		EX31_RS13540	0.79	+1.1
142,545	-		EX31_RS13540	0.81	-1.1
142,637	+		EX31_RS13540	0.85	+0.1
142,637	+		EX31_RS13540	0.85	-0.6
142,644	+		EX31_RS13540	0.85	+0.5
142,645	-		EX31_RS13540	0.85	-1.1
142,679	-		EX31_RS13540	0.86	-0.0
142,679	-		EX31_RS13540	0.86	+0.1
142,726	+		EX31_RS13540	0.88	-0.4
142,726	+		EX31_RS13540	0.88	+0.5
142,726	+		EX31_RS13540	0.88	-0.0
142,727	-		EX31_RS13540	0.88	-0.0
142,727	-		EX31_RS13540	0.88	+1.1
142,727	-		EX31_RS13540	0.88	-0.4
142,781	+				-1.6
142,781	+				+0.1
142,782	-				-0.5
142,782	-				+0.1
142,783	+				+0.1
142,783	+				-0.5
142,783	+				+2.1
142,784	-				-0.8
142,861	+				+0.1
142,862	-				+0.3
142,862	-				+0.0
142,862	-				-0.1
142,897	+				-0.3
142,897	+				+0.1
142,897	+				+0.1
142,897	+				+0.0
142,897	+				+0.1
142,898	-				-1.1
142,898	-				-0.6
142,898	-				-0.1
142,898	-				-0.4
142,987	+				-0.3
142,987	+				+0.3
142,988	-				+0.5
142,988	-				+0.3
142,988	-				-0.1
143,009	+				-0.1
143,042	+				+0.1
143,043	-				-0.6
143,043	-				-0.5
143,084	-				-0.3
143,111	+				+0.2
143,112	-				-0.1
143,112	-				+0.1
143,132	+				+0.5
143,133	-				+1.3
143,133	-				-0.5
143,167	+				+0.1
143,167	+				-0.4
143,229	-				-0.0
143,229	-				-0.0
143,449	+		EX31_RS13545	0.18	-0.8
143,450	-		EX31_RS13545	0.19	+0.3
143,488	+		EX31_RS13545	0.20	+0.3
143,489	-		EX31_RS13545	0.21	-2.6
143,526	+		EX31_RS13545	0.22	-0.8
143,571	+		EX31_RS13545	0.25	-0.9
143,572	-		EX31_RS13545	0.25	+0.1
143,614	+		EX31_RS13545	0.27	+0.4
143,614	+		EX31_RS13545	0.27	-0.0
143,614	+		EX31_RS13545	0.27	+0.0
143,614	+		EX31_RS13545	0.27	+1.2
143,614	+		EX31_RS13545	0.27	-0.4
143,615	-		EX31_RS13545	0.27	+1.0
143,615	-		EX31_RS13545	0.27	+0.5
143,615	-		EX31_RS13545	0.27	+0.0
143,615	-		EX31_RS13545	0.27	-0.3
143,615	-		EX31_RS13545	0.27	-0.6
143,615	-		EX31_RS13545	0.27	-0.1
143,615	-		EX31_RS13545	0.27	+0.7
143,686	+		EX31_RS13545	0.31	+0.3
143,766	+		EX31_RS13545	0.35	+0.4
143,766	+		EX31_RS13545	0.35	-0.0
143,766	+		EX31_RS13545	0.35	-0.3
143,767	-		EX31_RS13545	0.35	-0.2
143,767	-		EX31_RS13545	0.35	-2.5
143,767	-		EX31_RS13545	0.35	-0.5
143,833	-		EX31_RS13545	0.38	-0.1
143,953	-		EX31_RS13545	0.45	+0.7
143,953	-		EX31_RS13545	0.45	+0.0
143,980	+		EX31_RS13545	0.46	-0.2
144,009	+		EX31_RS13545	0.47	+0.4
144,009	+		EX31_RS13545	0.47	-0.4
144,009	+		EX31_RS13545	0.47	+0.1
144,009	+		EX31_RS13545	0.47	-0.3
144,010	-		EX31_RS13545	0.48	+0.3
144,010	-		EX31_RS13545	0.48	+0.3
144,010	-		EX31_RS13545	0.48	+0.5