Experiment: NL-CCM; vial
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS18755 and EX31_RS18760 are separated by 74 nucleotides EX31_RS18760 and EX31_RS18765 are separated by 245 nucleotides
EX31_RS18755: EX31_RS18755 - autotransporter outer membrane beta-barrel domain-containing protein, at 334,138 to 337,089
_RS18755
EX31_RS18760: EX31_RS18760 - DeoR/GlpR transcriptional regulator, at 337,164 to 337,397
_RS18760
EX31_RS18765: EX31_RS18765 - molybdopterin molybdotransferase MoeA, at 337,643 to 338,884
_RS18765
Position (kb) 337
338 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 336.169 kb on + strand, within EX31_RS18755 at 336.170 kb on - strand, within EX31_RS18755 at 336.170 kb on - strand, within EX31_RS18755 at 336.170 kb on - strand, within EX31_RS18755 at 336.170 kb on - strand, within EX31_RS18755 at 336.170 kb on - strand, within EX31_RS18755 at 336.172 kb on - strand, within EX31_RS18755 at 336.184 kb on + strand, within EX31_RS18755 at 336.196 kb on + strand, within EX31_RS18755 at 336.196 kb on + strand, within EX31_RS18755 at 336.196 kb on + strand, within EX31_RS18755 at 336.196 kb on + strand, within EX31_RS18755 at 336.196 kb on + strand, within EX31_RS18755 at 336.196 kb on + strand, within EX31_RS18755 at 336.197 kb on - strand, within EX31_RS18755 at 336.197 kb on - strand, within EX31_RS18755 at 336.199 kb on + strand, within EX31_RS18755 at 336.199 kb on + strand, within EX31_RS18755 at 336.200 kb on - strand, within EX31_RS18755 at 336.210 kb on + strand, within EX31_RS18755 at 336.210 kb on + strand, within EX31_RS18755 at 336.210 kb on + strand, within EX31_RS18755 at 336.210 kb on + strand, within EX31_RS18755 at 336.235 kb on - strand, within EX31_RS18755 at 336.253 kb on + strand, within EX31_RS18755 at 336.254 kb on - strand, within EX31_RS18755 at 336.265 kb on + strand, within EX31_RS18755 at 336.371 kb on + strand, within EX31_RS18755 at 336.371 kb on + strand, within EX31_RS18755 at 336.371 kb on + strand, within EX31_RS18755 at 336.371 kb on + strand, within EX31_RS18755 at 336.371 kb on + strand, within EX31_RS18755 at 336.371 kb on + strand, within EX31_RS18755 at 336.371 kb on + strand, within EX31_RS18755 at 336.371 kb on + strand, within EX31_RS18755 at 336.371 kb on + strand, within EX31_RS18755 at 336.372 kb on - strand, within EX31_RS18755 at 336.372 kb on - strand, within EX31_RS18755 at 336.372 kb on - strand, within EX31_RS18755 at 336.372 kb on - strand, within EX31_RS18755 at 336.372 kb on - strand, within EX31_RS18755 at 336.373 kb on + strand, within EX31_RS18755 at 336.442 kb on - strand, within EX31_RS18755 at 336.514 kb on + strand, within EX31_RS18755 at 336.514 kb on + strand, within EX31_RS18755 at 336.514 kb on + strand, within EX31_RS18755 at 336.515 kb on - strand, within EX31_RS18755 at 336.515 kb on - strand, within EX31_RS18755 at 336.515 kb on - strand, within EX31_RS18755 at 336.530 kb on - strand, within EX31_RS18755 at 336.533 kb on - strand, within EX31_RS18755 at 336.533 kb on - strand, within EX31_RS18755 at 336.559 kb on + strand, within EX31_RS18755 at 336.559 kb on + strand, within EX31_RS18755 at 336.601 kb on + strand, within EX31_RS18755 at 336.601 kb on + strand, within EX31_RS18755 at 336.602 kb on - strand, within EX31_RS18755 at 336.619 kb on - strand, within EX31_RS18755 at 336.635 kb on - strand, within EX31_RS18755 at 336.635 kb on - strand, within EX31_RS18755 at 336.671 kb on - strand, within EX31_RS18755 at 336.671 kb on - strand, within EX31_RS18755 at 336.671 kb on - strand, within EX31_RS18755 at 336.718 kb on + strand, within EX31_RS18755 at 336.718 kb on + strand, within EX31_RS18755 at 336.719 kb on - strand, within EX31_RS18755 at 336.719 kb on - strand, within EX31_RS18755 at 336.719 kb on - strand, within EX31_RS18755 at 336.724 kb on + strand, within EX31_RS18755 at 336.725 kb on - strand, within EX31_RS18755 at 336.815 kb on + strand at 336.860 kb on - strand at 336.875 kb on + strand at 336.875 kb on + strand at 336.903 kb on + strand at 336.930 kb on + strand at 336.930 kb on + strand at 336.931 kb on - strand at 336.931 kb on - strand at 336.953 kb on - strand at 336.997 kb on - strand at 336.997 kb on - strand at 337.006 kb on + strand at 337.006 kb on + strand at 337.006 kb on + strand at 337.006 kb on + strand at 337.006 kb on + strand at 337.006 kb on + strand at 337.006 kb on + strand at 337.006 kb on + strand at 337.006 kb on + strand at 337.006 kb on + strand at 337.006 kb on + strand at 337.007 kb on - strand at 337.007 kb on - strand at 337.007 kb on - strand at 337.007 kb on - strand at 337.007 kb on - strand at 337.007 kb on - strand at 337.021 kb on + strand at 337.022 kb on - strand at 337.022 kb on - strand at 337.054 kb on + strand at 337.054 kb on + strand at 337.148 kb on + strand at 337.149 kb on - strand at 337.305 kb on + strand, within EX31_RS18760 at 337.305 kb on + strand, within EX31_RS18760 at 337.305 kb on + strand, within EX31_RS18760 at 337.305 kb on + strand, within EX31_RS18760 at 337.306 kb on - strand, within EX31_RS18760 at 337.306 kb on - strand, within EX31_RS18760 at 337.306 kb on - strand, within EX31_RS18760 at 337.306 kb on - strand, within EX31_RS18760 at 337.306 kb on - strand, within EX31_RS18760 at 337.306 kb on - strand, within EX31_RS18760 at 337.306 kb on - strand, within EX31_RS18760 at 337.306 kb on - strand, within EX31_RS18760 at 337.306 kb on - strand, within EX31_RS18760 at 337.332 kb on + strand, within EX31_RS18760 at 337.333 kb on - strand, within EX31_RS18760 at 337.333 kb on - strand, within EX31_RS18760 at 337.338 kb on + strand, within EX31_RS18760 at 337.339 kb on - strand, within EX31_RS18760 at 337.392 kb on - strand at 337.412 kb on + strand at 337.412 kb on + strand at 337.412 kb on + strand at 337.412 kb on + strand at 337.412 kb on + strand at 337.412 kb on + strand at 337.412 kb on + strand at 337.413 kb on - strand at 337.413 kb on - strand at 337.413 kb on - strand at 337.413 kb on - strand at 337.413 kb on - strand at 337.413 kb on - strand at 337.413 kb on - strand at 337.413 kb on - strand at 337.423 kb on + strand at 337.423 kb on + strand at 337.423 kb on + strand at 337.423 kb on + strand at 337.423 kb on + strand at 337.424 kb on - strand at 337.424 kb on - strand at 337.424 kb on - strand at 337.424 kb on - strand at 337.449 kb on + strand at 337.450 kb on - strand at 337.453 kb on + strand at 337.453 kb on + strand at 337.453 kb on + strand at 337.453 kb on + strand at 337.453 kb on + strand at 337.453 kb on + strand at 337.453 kb on + strand at 337.453 kb on + strand at 337.453 kb on + strand at 337.453 kb on + strand at 337.453 kb on + strand at 337.454 kb on - strand at 337.454 kb on - strand at 337.454 kb on - strand at 337.454 kb on - strand at 337.454 kb on - strand at 337.454 kb on - strand at 337.454 kb on - strand at 337.454 kb on - strand at 337.454 kb on - strand at 337.455 kb on + strand at 337.455 kb on + strand at 337.456 kb on - strand at 337.456 kb on - strand at 337.458 kb on + strand at 337.458 kb on + strand at 337.458 kb on + strand at 337.459 kb on - strand at 337.459 kb on - strand at 337.467 kb on + strand at 337.468 kb on - strand at 337.563 kb on + strand at 337.563 kb on + strand at 337.563 kb on + strand at 337.564 kb on - strand at 337.564 kb on - strand at 337.564 kb on - strand at 337.564 kb on - strand at 337.564 kb on - strand at 337.564 kb on - strand at 337.564 kb on - strand at 337.564 kb on - strand at 337.566 kb on + strand at 337.566 kb on + strand at 337.567 kb on - strand at 337.567 kb on - strand at 337.567 kb on - strand at 337.607 kb on - strand at 337.690 kb on + strand at 337.691 kb on - strand at 337.714 kb on + strand at 337.814 kb on - strand, within EX31_RS18765 at 337.832 kb on + strand, within EX31_RS18765 at 337.832 kb on + strand, within EX31_RS18765 at 337.839 kb on + strand, within EX31_RS18765 at 337.840 kb on - strand, within EX31_RS18765 at 337.840 kb on - strand, within EX31_RS18765 at 337.983 kb on + strand, within EX31_RS18765 at 337.983 kb on + strand, within EX31_RS18765 at 337.983 kb on + strand, within EX31_RS18765 at 337.983 kb on + strand, within EX31_RS18765 at 337.984 kb on - strand, within EX31_RS18765 at 337.984 kb on - strand, within EX31_RS18765 at 337.984 kb on - strand, within EX31_RS18765 at 338.022 kb on + strand, within EX31_RS18765 at 338.023 kb on - strand, within EX31_RS18765 at 338.023 kb on - strand, within EX31_RS18765 at 338.080 kb on + strand, within EX31_RS18765 at 338.112 kb on + strand, within EX31_RS18765 at 338.112 kb on + strand, within EX31_RS18765 at 338.112 kb on + strand, within EX31_RS18765 at 338.113 kb on - strand, within EX31_RS18765 at 338.113 kb on - strand, within EX31_RS18765 at 338.113 kb on - strand, within EX31_RS18765 at 338.196 kb on + strand, within EX31_RS18765 at 338.255 kb on + strand, within EX31_RS18765 at 338.255 kb on + strand, within EX31_RS18765 at 338.256 kb on - strand, within EX31_RS18765 at 338.256 kb on - strand, within EX31_RS18765 at 338.305 kb on + strand, within EX31_RS18765 at 338.306 kb on - strand, within EX31_RS18765 at 338.320 kb on - strand, within EX31_RS18765
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; vial remove 336,169 + EX31_RS18755 0.69 +0.7 336,170 - EX31_RS18755 0.69 +0.1 336,170 - EX31_RS18755 0.69 +1.1 336,170 - EX31_RS18755 0.69 +0.9 336,170 - EX31_RS18755 0.69 +0.3 336,170 - EX31_RS18755 0.69 -0.7 336,172 - EX31_RS18755 0.69 -1.5 336,184 + EX31_RS18755 0.69 -0.5 336,196 + EX31_RS18755 0.70 +0.2 336,196 + EX31_RS18755 0.70 +1.0 336,196 + EX31_RS18755 0.70 +0.9 336,196 + EX31_RS18755 0.70 -0.3 336,196 + EX31_RS18755 0.70 -0.2 336,196 + EX31_RS18755 0.70 -0.2 336,197 - EX31_RS18755 0.70 +0.4 336,197 - EX31_RS18755 0.70 -0.3 336,199 + EX31_RS18755 0.70 -1.2 336,199 + EX31_RS18755 0.70 -2.9 336,200 - EX31_RS18755 0.70 -2.6 336,210 + EX31_RS18755 0.70 +0.2 336,210 + EX31_RS18755 0.70 +1.4 336,210 + EX31_RS18755 0.70 -0.7 336,210 + EX31_RS18755 0.70 +0.4 336,235 - EX31_RS18755 0.71 +0.4 336,253 + EX31_RS18755 0.72 -0.2 336,254 - EX31_RS18755 0.72 -0.3 336,265 + EX31_RS18755 0.72 +0.3 336,371 + EX31_RS18755 0.76 +0.1 336,371 + EX31_RS18755 0.76 -0.8 336,371 + EX31_RS18755 0.76 -0.1 336,371 + EX31_RS18755 0.76 -1.0 336,371 + EX31_RS18755 0.76 +0.2 336,371 + EX31_RS18755 0.76 +0.9 336,371 + EX31_RS18755 0.76 +1.0 336,371 + EX31_RS18755 0.76 +0.6 336,371 + EX31_RS18755 0.76 -0.0 336,372 - EX31_RS18755 0.76 -1.2 336,372 - EX31_RS18755 0.76 -1.9 336,372 - EX31_RS18755 0.76 -0.5 336,372 - EX31_RS18755 0.76 -0.8 336,372 - EX31_RS18755 0.76 -0.5 336,373 + EX31_RS18755 0.76 -0.2 336,442 - EX31_RS18755 0.78 +0.2 336,514 + EX31_RS18755 0.80 -1.1 336,514 + EX31_RS18755 0.80 -1.2 336,514 + EX31_RS18755 0.80 -0.7 336,515 - EX31_RS18755 0.81 +0.0 336,515 - EX31_RS18755 0.81 +1.2 336,515 - EX31_RS18755 0.81 +0.4 336,530 - EX31_RS18755 0.81 -1.7 336,533 - EX31_RS18755 0.81 -0.9 336,533 - EX31_RS18755 0.81 +1.8 336,559 + EX31_RS18755 0.82 +0.1 336,559 + EX31_RS18755 0.82 +1.0 336,601 + EX31_RS18755 0.83 +0.7 336,601 + EX31_RS18755 0.83 -1.2 336,602 - EX31_RS18755 0.83 -1.2 336,619 - EX31_RS18755 0.84 -1.7 336,635 - EX31_RS18755 0.85 +0.4 336,635 - EX31_RS18755 0.85 +0.1 336,671 - EX31_RS18755 0.86 +0.3 336,671 - EX31_RS18755 0.86 -0.3 336,671 - EX31_RS18755 0.86 +1.0 336,718 + EX31_RS18755 0.87 -0.8 336,718 + EX31_RS18755 0.87 -1.1 336,719 - EX31_RS18755 0.87 +1.4 336,719 - EX31_RS18755 0.87 +1.0 336,719 - EX31_RS18755 0.87 -0.6 336,724 + EX31_RS18755 0.88 -0.7 336,725 - EX31_RS18755 0.88 +0.5 336,815 + -0.1 336,860 - -0.1 336,875 + +0.7 336,875 + -0.4 336,903 + -0.7 336,930 + +0.3 336,930 + +0.8 336,931 - -0.9 336,931 - -1.0 336,953 - +0.1 336,997 - -1.1 336,997 - -0.2 337,006 + +0.3 337,006 + +0.7 337,006 + +1.5 337,006 + -0.6 337,006 + -0.7 337,006 + +0.0 337,006 + -2.0 337,006 + -0.1 337,006 + -0.9 337,006 + +0.1 337,006 + +0.2 337,007 - -1.9 337,007 - +1.2 337,007 - -0.1 337,007 - -1.1 337,007 - +1.2 337,007 - +0.6 337,021 + +0.0 337,022 - -0.1 337,022 - +0.5 337,054 + -1.9 337,054 + +0.3 337,148 + +0.4 337,149 - +1.0 337,305 + EX31_RS18760 0.60 -0.1 337,305 + EX31_RS18760 0.60 -1.6 337,305 + EX31_RS18760 0.60 -1.0 337,305 + EX31_RS18760 0.60 +0.6 337,306 - EX31_RS18760 0.61 -0.9 337,306 - EX31_RS18760 0.61 -0.5 337,306 - EX31_RS18760 0.61 +0.0 337,306 - EX31_RS18760 0.61 -0.9 337,306 - EX31_RS18760 0.61 -0.5 337,306 - EX31_RS18760 0.61 +0.7 337,306 - EX31_RS18760 0.61 -0.2 337,306 - EX31_RS18760 0.61 -0.9 337,306 - EX31_RS18760 0.61 -0.2 337,332 + EX31_RS18760 0.72 -2.0 337,333 - EX31_RS18760 0.72 -0.4 337,333 - EX31_RS18760 0.72 -0.2 337,338 + EX31_RS18760 0.74 -0.4 337,339 - EX31_RS18760 0.75 -0.8 337,392 - -0.1 337,412 + +0.0 337,412 + -0.0 337,412 + -0.2 337,412 + +0.6 337,412 + +0.5 337,412 + -0.2 337,412 + -1.2 337,413 - -0.1 337,413 - -0.8 337,413 - -0.0 337,413 - -1.1 337,413 - -1.0 337,413 - -0.4 337,413 - -0.7 337,413 - -0.2 337,423 + -0.7 337,423 + +0.2 337,423 + +1.2 337,423 + +0.0 337,423 + -0.8 337,424 - -0.2 337,424 - +0.3 337,424 - +0.1 337,424 - -1.2 337,449 + -2.3 337,450 - -0.4 337,453 + -0.2 337,453 + -0.7 337,453 + -0.1 337,453 + +1.0 337,453 + +0.7 337,453 + +0.4 337,453 + -0.2 337,453 + -0.3 337,453 + +0.2 337,453 + +1.1 337,453 + +0.0 337,454 - +0.1 337,454 - -0.2 337,454 - +0.3 337,454 - +0.1 337,454 - -1.9 337,454 - -0.5 337,454 - +0.2 337,454 - -2.7 337,454 - -1.5 337,455 + +1.2 337,455 + -0.2 337,456 - -1.0 337,456 - +0.2 337,458 + +2.1 337,458 + -2.0 337,458 + -0.2 337,459 - -1.5 337,459 - -0.7 337,467 + -0.5 337,468 - +0.3 337,563 + -1.3 337,563 + -0.2 337,563 + -0.7 337,564 - -0.2 337,564 - +0.8 337,564 - -0.2 337,564 - -0.2 337,564 - -0.4 337,564 - -0.3 337,564 - -0.7 337,564 - -0.5 337,566 + -0.6 337,566 + -1.5 337,567 - -0.0 337,567 - -0.3 337,567 - -0.5 337,607 - -1.0 337,690 + +0.7 337,691 - +0.5 337,714 + +1.5 337,814 - EX31_RS18765 0.14 -0.4 337,832 + EX31_RS18765 0.15 -0.5 337,832 + EX31_RS18765 0.15 +1.3 337,839 + EX31_RS18765 0.16 +0.3 337,840 - EX31_RS18765 0.16 -0.1 337,840 - EX31_RS18765 0.16 +1.0 337,983 + EX31_RS18765 0.27 -0.7 337,983 + EX31_RS18765 0.27 +0.9 337,983 + EX31_RS18765 0.27 -0.3 337,983 + EX31_RS18765 0.27 -0.3 337,984 - EX31_RS18765 0.27 +0.7 337,984 - EX31_RS18765 0.27 +0.4 337,984 - EX31_RS18765 0.27 +0.5 338,022 + EX31_RS18765 0.31 +0.2 338,023 - EX31_RS18765 0.31 +0.0 338,023 - EX31_RS18765 0.31 +1.1 338,080 + EX31_RS18765 0.35 -0.7 338,112 + EX31_RS18765 0.38 +1.0 338,112 + EX31_RS18765 0.38 -0.3 338,112 + EX31_RS18765 0.38 -0.1 338,113 - EX31_RS18765 0.38 +0.2 338,113 - EX31_RS18765 0.38 +1.6 338,113 - EX31_RS18765 0.38 +1.0 338,196 + EX31_RS18765 0.45 +0.9 338,255 + EX31_RS18765 0.49 +1.4 338,255 + EX31_RS18765 0.49 +0.0 338,256 - EX31_RS18765 0.49 +0.5 338,256 - EX31_RS18765 0.49 +0.1 338,305 + EX31_RS18765 0.53 +1.0 338,306 - EX31_RS18765 0.53 +0.1 338,320 - EX31_RS18765 0.55 +0.2
Or see this region's nucleotide sequence