Strain Fitness in Rahnella sp. WP5 around EX31_RS13170

Experiment: NL-CCM; vial

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; vial
59,545	+		EX31_RS13165	0.76	+0.9
59,545	+		EX31_RS13165	0.76	+1.0
59,545	+		EX31_RS13165	0.76	+0.7
59,545	+		EX31_RS13165	0.76	+0.1
59,545	+		EX31_RS13165	0.76	+0.9
59,546	-		EX31_RS13165	0.76	-1.0
59,546	-		EX31_RS13165	0.76	-0.5
59,546	-		EX31_RS13165	0.76	+0.5
59,549	-		EX31_RS13165	0.77	-0.6
59,558	-		EX31_RS13165	0.77	+0.3
59,585	+		EX31_RS13165	0.78	-0.6
59,585	+		EX31_RS13165	0.78	+0.3
59,586	-		EX31_RS13165	0.78	-0.2
59,586	-		EX31_RS13165	0.78	-0.1
59,586	-		EX31_RS13165	0.78	+0.4
59,597	+		EX31_RS13165	0.78	+0.5
59,610	-		EX31_RS13165	0.79	-0.1
59,655	+		EX31_RS13165	0.80	-0.6
59,655	+		EX31_RS13165	0.80	-0.2
59,656	-		EX31_RS13165	0.80	+0.5
59,656	-		EX31_RS13165	0.80	-0.3
59,656	-		EX31_RS13165	0.80	-0.3
59,656	-		EX31_RS13165	0.80	+0.7
59,732	+		EX31_RS13165	0.83	-0.3
59,760	+		EX31_RS13165	0.84	+0.9
59,760	+		EX31_RS13165	0.84	-0.2
59,760	+		EX31_RS13165	0.84	+0.7
59,761	-		EX31_RS13165	0.84	-1.0
59,796	+		EX31_RS13165	0.85	+0.0
59,796	+		EX31_RS13165	0.85	+0.4
59,797	-		EX31_RS13165	0.85	-0.0
59,797	-		EX31_RS13165	0.85	+0.9
59,833	+		EX31_RS13165	0.86	-0.9
59,849	-		EX31_RS13165	0.87	+0.2
59,921	-		EX31_RS13165	0.89	-0.5
59,921	-		EX31_RS13165	0.89	-0.3
59,921	-		EX31_RS13165	0.89	-0.3
59,940	+				+0.4
59,954	+				-0.2
59,954	+				+0.5
59,954	+				-0.5
59,955	-				-1.4
59,956	+				+0.3
59,957	-				+0.1
59,957	-				+0.8
59,957	-				-0.5
59,957	-				+0.3
59,957	-				+0.4
60,065	+				-0.7
60,065	+				+0.4
60,066	-				+0.3
60,066	-				-0.3
60,072	-				+0.5
60,080	+				-0.0
60,080	+				-0.8
60,081	-				-0.6
60,116	+				+0.9
60,117	-				-0.4
60,122	+				+1.2
60,122	+				-0.7
60,122	+				+0.5
60,122	+				-0.3
60,123	-				-0.2
60,123	-				-2.2
60,219	+				-0.6
60,266	+				+0.0
60,267	-				+0.6
60,267	-				+0.4
60,267	-				+0.7
60,270	+				+0.8
60,271	-				+1.0
60,272	+				-0.9
60,272	+				+0.0
60,272	+				+0.3
60,273	-				-0.3
60,273	-				+0.3
60,273	-				+1.1
60,285	+				+0.8
60,285	+				-0.0
60,285	+				+0.7
60,286	-				-0.4
60,286	-				+0.6
60,326	+				-0.1
60,348	-				+0.1
60,382	+				-0.3
60,382	+				-0.2
60,382	+				+0.1
60,382	+				+1.1
60,383	-				+0.6
60,383	-				-1.0
60,383	-				+1.0
60,383	-				-0.6
60,383	-				+0.1
60,383	-				-0.0
60,406	-				-0.3
60,422	+				-2.0
60,423	-				+0.6
60,425	-				-3.3
60,444	-				-0.0
60,448	+				+0.1
60,449	-				+0.2
60,449	-				+1.0
60,453	+				+0.2
60,453	+				+0.3
60,453	+				-0.5
60,453	+				-1.7
60,453	+				-1.4
60,454	-				-0.6
60,454	-				+0.0
60,454	-				-0.3
60,454	-				-0.2
60,454	-				+0.3
60,454	-				-1.4
60,483	+				-1.6
60,483	+				+0.9
60,483	+				-0.5
60,483	+				-0.5
60,483	+				-0.8
60,484	-				-0.3
60,502	+				-1.8
60,506	-				-1.0
60,506	-				+0.1
60,514	+				+0.0
60,515	-				-0.6
60,515	-				+0.6
60,546	-				+0.2
60,548	+				+0.9
60,549	-				+0.0
60,549	-				-0.4
60,560	+				+0.1
60,560	+				+0.0
60,634	+		EX31_RS13170	0.31	-1.6
60,690	+		EX31_RS13170	0.47	+0.5
60,691	-		EX31_RS13170	0.48	-0.7
60,691	-		EX31_RS13170	0.48	-0.4
60,691	-		EX31_RS13170	0.48	+1.0
60,691	-		EX31_RS13170	0.48	-0.8
60,691	-		EX31_RS13170	0.48	-0.7
60,771	+		EX31_RS13170	0.71	+0.9
60,771	+		EX31_RS13170	0.71	+0.4
60,774	+		EX31_RS13170	0.72	-2.1
60,775	-		EX31_RS13170	0.72	-1.3
60,775	-		EX31_RS13170	0.72	+0.2
60,775	-		EX31_RS13170	0.72	-1.7
60,775	-		EX31_RS13170	0.72	-0.1
60,775	-		EX31_RS13170	0.72	-0.9
60,775	-		EX31_RS13170	0.72	-0.9
60,976	+		EX31_RS13175	0.26	-0.3
60,977	-		EX31_RS13175	0.26	-0.4
60,983	+		EX31_RS13175	0.27	+0.3
60,984	-		EX31_RS13175	0.27	+0.4
61,034	+		EX31_RS13175	0.39	+1.7
61,034	+		EX31_RS13175	0.39	+0.2
61,035	-		EX31_RS13175	0.39	-0.7
61,059	-		EX31_RS13175	0.45	+0.1
61,161	+		EX31_RS13175	0.68	+0.2
61,161	+		EX31_RS13175	0.68	-0.8
61,161	+		EX31_RS13175	0.68	+0.0
61,162	-		EX31_RS13175	0.68	+0.4
61,195	+		EX31_RS13175	0.76	-0.0
61,195	+		EX31_RS13175	0.76	-0.3
61,195	+		EX31_RS13175	0.76	+0.2
61,195	+		EX31_RS13175	0.76	-1.6
61,196	-		EX31_RS13175	0.76	+0.1
61,253	+		EX31_RS13175	0.89	-2.5
61,254	-		EX31_RS13175	0.89	+0.2
61,254	-		EX31_RS13175	0.89	-0.3
61,289	+				-1.1
61,349	+				-0.2
61,350	-				+0.6
61,350	-				-0.8
61,350	-				+0.6
61,350	-				-1.6
61,431	+		EX31_RS13180	0.14	-0.3
61,431	+		EX31_RS13180	0.14	-0.5
61,431	+		EX31_RS13180	0.14	+0.9
61,431	+		EX31_RS13180	0.14	+1.1
61,431	+		EX31_RS13180	0.14	+0.0
61,432	-		EX31_RS13180	0.15	+0.2
61,432	-		EX31_RS13180	0.15	+0.0
61,432	-		EX31_RS13180	0.15	-0.0
61,458	-		EX31_RS13180	0.19	-0.2
61,587	+		EX31_RS13180	0.41	+0.4
61,588	-		EX31_RS13180	0.41	-1.4
61,641	+		EX31_RS13180	0.50	-0.2
61,641	+		EX31_RS13180	0.50	+0.5
61,642	-		EX31_RS13180	0.50	-0.5
61,642	-		EX31_RS13180	0.50	+0.3
61,642	-		EX31_RS13180	0.50	-0.1
61,642	-		EX31_RS13180	0.50	-1.3
61,645	+		EX31_RS13180	0.51	-0.4
61,645	+		EX31_RS13180	0.51	+0.6
61,645	+		EX31_RS13180	0.51	+1.0
61,645	+		EX31_RS13180	0.51	-0.8
61,646	-		EX31_RS13180	0.51	+0.4
61,646	-		EX31_RS13180	0.51	-0.3
61,646	-		EX31_RS13180	0.51	-0.3
61,741	+		EX31_RS13180	0.67	+0.6
61,741	+		EX31_RS13180	0.67	-0.1
61,762	+		EX31_RS13180	0.71	+0.4
61,762	+		EX31_RS13180	0.71	-0.7