Strain Fitness in Rahnella sp. WP5 around EX31_RS15480

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
49,022	+		EX31_RS15470	0.44	-1.2
49,023	-		EX31_RS15470	0.44	+0.5
49,027	+		EX31_RS15470	0.45	-0.3
49,028	-		EX31_RS15470	0.45	-0.8
49,028	-		EX31_RS15470	0.45	+1.7
49,028	-		EX31_RS15470	0.45	-1.2
49,127	+		EX31_RS15470	0.56	-0.0
49,128	-		EX31_RS15470	0.56	+0.2
49,146	+		EX31_RS15470	0.58	+0.5
49,146	+		EX31_RS15470	0.58	+0.0
49,146	+		EX31_RS15470	0.58	+0.9
49,146	+		EX31_RS15470	0.58	+0.4
49,146	+		EX31_RS15470	0.58	-0.0
49,146	+		EX31_RS15470	0.58	-0.3
49,147	-		EX31_RS15470	0.58	+0.1
49,147	-		EX31_RS15470	0.58	+0.2
49,148	+		EX31_RS15470	0.58	-0.5
49,148	+		EX31_RS15470	0.58	-0.3
49,148	+		EX31_RS15470	0.58	+0.0
49,148	+		EX31_RS15470	0.58	-0.4
49,148	+		EX31_RS15470	0.58	-0.5
49,148	+		EX31_RS15470	0.58	+0.1
49,148	+		EX31_RS15470	0.58	+0.0
49,148	+		EX31_RS15470	0.58	+0.3
49,148	+		EX31_RS15470	0.58	-0.4
49,148	+		EX31_RS15470	0.58	+0.5
49,148	+		EX31_RS15470	0.58	+1.6
49,148	+		EX31_RS15470	0.58	-0.4
49,148	+		EX31_RS15470	0.58	+1.3
49,149	-		EX31_RS15470	0.58	+1.1
49,149	-		EX31_RS15470	0.58	+0.1
49,149	-		EX31_RS15470	0.58	-0.9
49,149	-		EX31_RS15470	0.58	-1.0
49,149	-		EX31_RS15470	0.58	-0.2
49,149	-		EX31_RS15470	0.58	-0.7
49,149	-		EX31_RS15470	0.58	+0.2
49,149	-		EX31_RS15470	0.58	+1.0
49,149	-		EX31_RS15470	0.58	+0.1
49,149	-		EX31_RS15470	0.58	+0.1
49,149	-		EX31_RS15470	0.58	+0.5
49,149	-		EX31_RS15470	0.58	+0.2
49,149	-		EX31_RS15470	0.58	+0.8
49,149	-		EX31_RS15470	0.58	-0.6
49,149	-		EX31_RS15470	0.58	+1.1
49,149	-		EX31_RS15470	0.58	+0.3
49,151	+		EX31_RS15470	0.58	+0.3
49,152	-		EX31_RS15470	0.58	-0.4
49,152	-		EX31_RS15470	0.58	+0.8
49,152	-		EX31_RS15470	0.58	-0.2
49,152	-		EX31_RS15470	0.58	+0.8
49,159	-		EX31_RS15470	0.59	+0.2
49,232	+		EX31_RS15470	0.67	-1.2
49,233	-		EX31_RS15470	0.67	-0.2
49,274	+		EX31_RS15470	0.72	-0.5
49,328	+		EX31_RS15470	0.77	+0.6
49,367	-		EX31_RS15470	0.82	+0.0
49,367	-		EX31_RS15470	0.82	-0.5
49,381	+		EX31_RS15470	0.83	-2.0
49,381	+		EX31_RS15470	0.83	-0.0
49,381	+		EX31_RS15470	0.83	+0.1
49,382	-		EX31_RS15470	0.83	-0.0
49,382	-		EX31_RS15470	0.83	-0.5
49,382	-		EX31_RS15470	0.83	-0.5
49,382	-		EX31_RS15470	0.83	+0.4
49,382	-		EX31_RS15470	0.83	+0.3
49,382	-		EX31_RS15470	0.83	+0.3
49,382	-		EX31_RS15470	0.83	+0.6
49,382	-		EX31_RS15470	0.83	-0.3
49,392	-		EX31_RS15470	0.84	+0.1
49,396	+		EX31_RS15470	0.85	-0.3
49,396	+		EX31_RS15470	0.85	-0.6
49,396	+		EX31_RS15470	0.85	-0.2
49,397	-		EX31_RS15470	0.85	+0.2
49,397	-		EX31_RS15470	0.85	+0.4
49,397	-		EX31_RS15470	0.85	+0.5
49,409	+		EX31_RS15470	0.86	-0.0
49,409	+		EX31_RS15470	0.86	-0.4
49,409	+		EX31_RS15470	0.86	-0.2
49,410	-		EX31_RS15470	0.86	+0.4
49,487	+				-1.0
49,491	-				-0.9
49,501	+				-0.8
49,502	-				-0.9
49,502	-				-0.3
49,511	-				-1.2
49,552	+				+0.2
49,553	-				-0.1
49,553	-				+0.5
49,586	+				+1.1
49,586	+				-1.4
49,586	+				-0.2
49,586	+				-0.2
49,586	+				-0.2
49,586	+				-0.2
49,586	+				+0.6
49,586	+				+0.1
49,586	+				+0.9
49,586	+				-0.4
49,586	+				+0.7
49,586	+				-0.7
49,586	+				+0.3
49,586	+				-0.7
49,586	+				+1.5
49,586	+				+0.7
49,587	-				+0.5
49,587	-				+0.4
49,587	-				-0.4
49,587	-				+0.8
49,587	-				-0.1
49,587	-				+0.7
49,587	-				-2.4
49,587	-				-0.1
49,591	+				-0.3
49,592	-				-0.2
49,599	+				+0.0
49,599	+				+0.3
49,633	+				+0.5
49,633	+				+0.4
49,633	+				-0.8
49,633	+				+0.5
49,633	+				+0.0
49,634	-				+1.6
49,639	+				-0.3
49,665	+				+0.4
49,673	-				+2.1
49,735	+		EX31_RS15475	0.39	-0.1
49,766	+		EX31_RS15475	0.55	+0.4
49,766	+		EX31_RS15475	0.55	-1.1
49,766	+		EX31_RS15475	0.55	+0.5
49,766	+		EX31_RS15475	0.55	+0.0
49,766	+		EX31_RS15475	0.55	-0.6
49,766	+		EX31_RS15475	0.55	+0.5
49,766	+		EX31_RS15475	0.55	+1.6
49,766	+		EX31_RS15475	0.55	-0.0
49,766	+		EX31_RS15475	0.55	+0.3
49,766	+		EX31_RS15475	0.55	-0.4
49,766	+		EX31_RS15475	0.55	+0.6
49,766	+		EX31_RS15475	0.55	-0.2
49,767	-		EX31_RS15475	0.55	+0.1
49,767	-		EX31_RS15475	0.55	-0.8
49,767	-		EX31_RS15475	0.55	-0.5
49,767	-		EX31_RS15475	0.55	+0.3
49,767	-		EX31_RS15475	0.55	+0.5
49,767	-		EX31_RS15475	0.55	+0.3
49,767	-		EX31_RS15475	0.55	+0.2
49,767	-		EX31_RS15475	0.55	+0.3
49,767	-		EX31_RS15475	0.55	-0.5
49,772	+		EX31_RS15475	0.58	-0.1
49,772	+		EX31_RS15475	0.58	-0.4
49,772	+		EX31_RS15475	0.58	+0.8
49,772	+		EX31_RS15475	0.58	+0.2
49,772	+		EX31_RS15475	0.58	+0.1
49,772	+		EX31_RS15475	0.58	-0.7
49,772	+		EX31_RS15475	0.58	-0.2
49,772	+		EX31_RS15475	0.58	+0.4
49,772	+		EX31_RS15475	0.58	-0.1
49,772	+		EX31_RS15475	0.58	+0.6
49,772	+		EX31_RS15475	0.58	-0.5
49,772	+		EX31_RS15475	0.58	-0.2
49,773	-		EX31_RS15475	0.58	+2.1
49,773	-		EX31_RS15475	0.58	-0.5
49,773	-		EX31_RS15475	0.58	+1.4
49,773	-		EX31_RS15475	0.58	-1.4
49,773	-		EX31_RS15475	0.58	+0.5
49,773	-		EX31_RS15475	0.58	-0.2
49,773	-		EX31_RS15475	0.58	+0.8
49,773	-		EX31_RS15475	0.58	+0.1
49,773	-		EX31_RS15475	0.58	-0.8
49,773	-		EX31_RS15475	0.58	-0.1
49,773	-		EX31_RS15475	0.58	+1.0
49,773	-		EX31_RS15475	0.58	-1.6
49,773	-		EX31_RS15475	0.58	+0.4
49,773	-		EX31_RS15475	0.58	+1.4
49,773	-		EX31_RS15475	0.58	-0.1
49,773	-		EX31_RS15475	0.58	+1.5
49,791	+		EX31_RS15475	0.67	-0.6
49,791	+		EX31_RS15475	0.67	-0.0
49,791	+		EX31_RS15475	0.67	+0.6
49,791	+		EX31_RS15475	0.67	+0.5
49,791	+		EX31_RS15475	0.67	+0.0
49,963	+				-0.2
49,963	+				-0.4
49,964	-				+0.7
49,964	-				+0.7
49,964	-				-0.9
49,964	-				+0.1
49,964	-				-1.0
49,964	-				-0.7
49,977	-				-0.6
49,977	-				+0.8
50,002	+				-0.1
50,002	+				-1.2
50,003	-				+0.8
50,003	-				-0.4
50,003	-				-0.5
50,003	-				+0.3
50,003	-				+1.2
50,003	-				-0.1
50,003	-				-0.4
50,006	+				+0.1
50,007	-				+0.0
50,007	-				-1.0
50,050	+		EX31_RS15480	0.20	+0.5
50,051	-		EX31_RS15480	0.20	-0.0
50,051	-		EX31_RS15480	0.20	+1.2
50,100	+		EX31_RS15480	0.34	+1.7
50,100	+		EX31_RS15480	0.34	+2.1
50,100	+		EX31_RS15480	0.34	-1.6
50,100	+		EX31_RS15480	0.34	-0.7
50,100	+		EX31_RS15480	0.34	-0.4
50,100	+		EX31_RS15480	0.34	+0.9
50,100	+		EX31_RS15480	0.34	-0.5
50,100	+		EX31_RS15480	0.34	+0.4
50,100	+		EX31_RS15480	0.34	-0.3
50,100	+		EX31_RS15480	0.34	+0.0
50,101	-		EX31_RS15480	0.34	+0.0
50,101	-		EX31_RS15480	0.34	+0.5
50,101	-		EX31_RS15480	0.34	+0.5
50,106	+		EX31_RS15480	0.36	+0.1
50,106	+		EX31_RS15480	0.36	-0.0
50,221	+		EX31_RS15480	0.68	+0.2
50,222	-		EX31_RS15480	0.68	-0.5
50,222	-		EX31_RS15480	0.68	+1.0
50,248	-		EX31_RS15480	0.76	-0.4
50,281	+		EX31_RS15480	0.85	-0.3
50,281	+		EX31_RS15480	0.85	+0.4
50,282	-		EX31_RS15480	0.85	-0.1
50,301	+				+0.8
50,301	+				-1.0
50,301	+				+1.0
50,301	+				+0.2
50,301	+				+0.2
50,301	+				-0.3
50,301	+				-0.5
50,301	+				+0.1
50,302	-				-0.2
50,302	-				-0.3
50,302	-				-0.1
50,302	-				+1.6
50,302	-				-1.1
50,302	-				+1.0
50,302	-				-0.2
50,302	-				+0.1
50,302	-				-0.2
50,302	-				-0.2
50,345	+				-0.8
50,346	-				-0.6
50,366	+				-0.9
50,366	+				+1.1
50,367	-				-1.0
50,367	-				+0.3
50,377	-				-0.5
50,377	-				+0.2
50,377	-				-0.9
50,377	-				-0.9
50,404	+				-0.8
50,404	+				+0.0
50,404	+				+0.1
50,405	-				+0.1
50,453	+		EX31_RS15485	0.13	+0.1
50,453	+		EX31_RS15485	0.13	+1.3
50,453	+		EX31_RS15485	0.13	+0.9
50,568	+		EX31_RS15485	0.31	+0.6
50,568	+		EX31_RS15485	0.31	-0.5
50,568	+		EX31_RS15485	0.31	-1.6
50,568	+		EX31_RS15485	0.31	-0.1
50,568	+		EX31_RS15485	0.31	-0.8
50,568	+		EX31_RS15485	0.31	+0.6
50,569	-		EX31_RS15485	0.31	-0.4
50,569	-		EX31_RS15485	0.31	+1.0
50,569	-		EX31_RS15485	0.31	+0.2
50,569	-		EX31_RS15485	0.31	-1.0
50,569	-		EX31_RS15485	0.31	+0.4
50,583	+		EX31_RS15485	0.33	-0.3
50,584	-		EX31_RS15485	0.33	-0.8
50,584	-		EX31_RS15485	0.33	+0.7
50,656	+		EX31_RS15485	0.45	+0.9
50,656	+		EX31_RS15485	0.45	-1.3
50,656	+		EX31_RS15485	0.45	+0.9
50,656	+		EX31_RS15485	0.45	-0.1
50,657	-		EX31_RS15485	0.45	-1.3
50,657	-		EX31_RS15485	0.45	-0.3
50,658	+		EX31_RS15485	0.45	+0.0
50,658	+		EX31_RS15485	0.45	+0.4
50,658	+		EX31_RS15485	0.45	+0.1
50,658	+		EX31_RS15485	0.45	+0.6
50,658	+		EX31_RS15485	0.45	+0.1
50,659	-		EX31_RS15485	0.45	-0.1
50,727	+		EX31_RS15485	0.56	+1.2
50,728	-		EX31_RS15485	0.56	-0.0
50,806	+		EX31_RS15485	0.68	+0.1
50,807	-		EX31_RS15485	0.68	+0.4
50,807	-		EX31_RS15485	0.68	+0.8
50,807	-		EX31_RS15485	0.68	+0.1
50,807	-		EX31_RS15485	0.68	-0.4
50,911	+		EX31_RS15485	0.84	+0.3
50,911	+		EX31_RS15485	0.84	+0.4
50,911	+		EX31_RS15485	0.84	-0.3
50,911	+		EX31_RS15485	0.84	-0.2
50,911	+		EX31_RS15485	0.84	+0.1
50,911	+		EX31_RS15485	0.84	+0.7
50,911	+		EX31_RS15485	0.84	-0.5
50,911	+		EX31_RS15485	0.84	+0.3
50,911	+		EX31_RS15485	0.84	+0.9
50,912	-		EX31_RS15485	0.84	-0.6
50,912	-		EX31_RS15485	0.84	+0.1
50,912	-		EX31_RS15485	0.84	-0.3
50,912	-		EX31_RS15485	0.84	-0.1
50,912	-		EX31_RS15485	0.84	+0.3
50,912	-		EX31_RS15485	0.84	-1.1
50,912	-		EX31_RS15485	0.84	+0.1
50,912	-		EX31_RS15485	0.84	+0.0
50,916	-		EX31_RS15485	0.85	+0.3
50,916	-		EX31_RS15485	0.85	-0.4
50,916	-		EX31_RS15485	0.85	-0.0
51,008	+				-0.9
51,008	+				+0.2
51,009	-				+0.6
51,037	+				+0.6
51,039	+				+1.0
51,039	+				+0.3
51,039	+				+1.1
51,039	+				-0.1
51,039	+				+0.5
51,040	-				+0.5
51,040	-				+0.1
51,040	-				-0.8
51,040	-				+0.7
51,040	-				+0.1
51,043	+				-0.1
51,043	+				+1.1
51,043	+				+0.0
51,043	+				+0.5
51,043	+				+0.8
51,043	+				-0.1
51,043	+				+0.6
51,043	+				+0.1
51,043	+				+0.4
51,043	+				-0.6
51,043	+				+0.7
51,043	+				+0.2
51,043	+				+0.5
51,043	+				-0.4
51,043	+				-0.7
51,044	-				-1.2
51,044	-				-0.9
51,044	-				-0.3
51,044	-				+0.1
51,044	-				+0.3
51,044	-				-0.0
51,044	-				+1.1
51,044	-				-1.9
51,044	-				+0.5
51,044	-				-0.3
51,044	-				+1.1
51,044	-				+0.4
51,044	-				-0.8
51,044	-				-0.2
51,047	+				+0.3
51,047	+				-0.2
51,047	+				+0.2
51,047	+				+0.0
51,047	+				+0.2
51,047	+				-0.6
51,047	+				-0.4
51,047	+				-0.9
51,047	+				-0.9
51,048	-				-0.5
51,048	-				+0.4
51,048	-				-0.2
51,048	-				-0.8
51,048	-				+0.1
51,048	-				+0.8
51,105	-				-0.9
51,106	+				+0.2
51,106	+				+0.1
51,106	+				+0.7
51,106	+				-0.1
51,116	+				+0.9
51,116	+				-0.1
51,116	+				+0.2
51,116	+				-0.2
51,116	+				+1.4
51,117	-				-0.4
51,117	-				+0.1
51,117	-				-0.4
51,117	-				+0.3
51,117	-				-0.9
51,117	-				+0.4
51,117	-				-0.0
51,117	-				+0.1
51,148	+				+0.3
51,191	+		EX31_RS15490	0.12	+1.2
51,191	+		EX31_RS15490	0.12	-0.2
51,191	+		EX31_RS15490	0.12	-1.1
51,191	+		EX31_RS15490	0.12	-0.5
51,192	-		EX31_RS15490	0.12	+0.2
51,192	-		EX31_RS15490	0.12	-1.3
51,192	-		EX31_RS15490	0.12	-1.8
51,192	-		EX31_RS15490	0.12	+0.1
51,192	-		EX31_RS15490	0.12	-0.9
51,192	-		EX31_RS15490	0.12	-0.8
51,192	-		EX31_RS15490	0.12	-0.2
51,195	+		EX31_RS15490	0.13	+0.2
51,195	+		EX31_RS15490	0.13	-0.6
51,203	+		EX31_RS15490	0.14	+0.3
51,203	+		EX31_RS15490	0.14	-1.1
51,204	-		EX31_RS15490	0.14	+0.3
51,218	+		EX31_RS15490	0.15	-0.8
51,227	+		EX31_RS15490	0.16	+0.6
51,240	+		EX31_RS15490	0.18	-0.2
51,240	+		EX31_RS15490	0.18	-0.1
51,240	+		EX31_RS15490	0.18	-0.2
51,240	+		EX31_RS15490	0.18	+2.7
51,240	+		EX31_RS15490	0.18	-0.2
51,240	+		EX31_RS15490	0.18	+0.9
51,240	+		EX31_RS15490	0.18	+0.0
51,240	+		EX31_RS15490	0.18	-0.5
51,240	+		EX31_RS15490	0.18	+0.8
51,241	-		EX31_RS15490	0.18	-0.1
51,241	-		EX31_RS15490	0.18	-0.1
51,241	-		EX31_RS15490	0.18	-0.4
51,241	-		EX31_RS15490	0.18	+0.8
51,241	-		EX31_RS15490	0.18	+0.6
51,241	-		EX31_RS15490	0.18	-0.2
51,241	-		EX31_RS15490	0.18	+0.7
51,261	-		EX31_RS15490	0.20	-0.6
51,268	-		EX31_RS15490	0.21	+0.3
51,279	+		EX31_RS15490	0.22	+1.1
51,280	-		EX31_RS15490	0.22	-0.7
51,280	-		EX31_RS15490	0.22	-1.9
51,280	-		EX31_RS15490	0.22	+0.5
51,280	-		EX31_RS15490	0.22	-0.5