Strain Fitness in Rahnella sp. WP5 around EX31_RS21440

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
30,404	+				-0.2
30,415	+		EX31_RS21435	0.10	-0.3
30,415	+		EX31_RS21435	0.10	-0.3
30,492	+		EX31_RS21435	0.19	-1.9
30,492	+		EX31_RS21435	0.19	+0.6
30,492	+		EX31_RS21435	0.19	-0.0
30,493	-		EX31_RS21435	0.19	+0.8
30,493	-		EX31_RS21435	0.19	+0.6
30,493	-		EX31_RS21435	0.19	-0.8
30,505	+		EX31_RS21435	0.20	-0.7
30,548	+		EX31_RS21435	0.25	+0.3
30,657	+		EX31_RS21435	0.37	+1.0
30,728	+		EX31_RS21435	0.45	-0.5
30,728	+		EX31_RS21435	0.45	+0.7
30,728	+		EX31_RS21435	0.45	-0.0
30,728	+		EX31_RS21435	0.45	+0.4
30,728	+		EX31_RS21435	0.45	+1.0
30,729	-		EX31_RS21435	0.45	+0.7
30,729	-		EX31_RS21435	0.45	-0.6
30,729	-		EX31_RS21435	0.45	-0.5
30,785	-		EX31_RS21435	0.52	+0.5
30,830	-		EX31_RS21435	0.57	-0.3
30,830	-		EX31_RS21435	0.57	-0.1
30,856	+		EX31_RS21435	0.60	+0.5
30,857	-		EX31_RS21435	0.60	-0.1
30,857	-		EX31_RS21435	0.60	+0.7
30,979	+		EX31_RS21435	0.74	-0.2
30,979	+		EX31_RS21435	0.74	-0.1
31,037	+		EX31_RS21435	0.80	+0.5
31,037	+		EX31_RS21435	0.80	-0.0
31,037	+		EX31_RS21435	0.80	+0.0
31,037	+		EX31_RS21435	0.80	-0.5
31,038	-		EX31_RS21435	0.80	+0.8
31,038	-		EX31_RS21435	0.80	-0.9
31,126	+				-0.3
31,126	+				-2.1
31,127	-				-0.6
31,127	-				+0.5
31,127	-				+0.1
31,157	+				+0.7
31,157	+				-0.1
31,158	-				-0.5
31,211	+				+0.1
31,216	+				-0.5
31,216	+				+0.1
31,216	+				+0.1
31,216	+				+0.4
31,216	+				+0.5
31,216	+				+0.1
31,216	+				-0.5
31,216	+				+1.0
31,217	-				-1.0
31,217	-				+0.1
31,217	-				+0.1
31,217	-				+0.5
31,217	-				-0.1
31,217	-				-0.5
31,217	-				-0.4
31,275	+				-0.5
31,276	-				+0.6
31,293	-				+0.8
31,303	-				-0.9
31,336	-				+0.4
31,336	-				-0.5
31,350	+				-0.2
31,350	+				-0.2
31,350	+				+0.2
31,350	+				-0.4
31,351	-				-1.1
31,351	-				-2.0
31,351	-				-1.2
31,371	+				+0.1
31,372	-				+0.7
31,403	+				-0.2
31,404	-				+0.1
31,497	+		EX31_RS21440	0.17	-0.4
31,498	-		EX31_RS21440	0.17	-0.6
31,498	-		EX31_RS21440	0.17	-0.2
31,498	-		EX31_RS21440	0.17	+0.4
31,557	-		EX31_RS21440	0.26	+0.4
31,597	+		EX31_RS21440	0.33	-0.8
31,598	-		EX31_RS21440	0.33	-0.1
31,662	-		EX31_RS21440	0.43	-1.0
31,771	-		EX31_RS21440	0.61	-0.6
31,778	+		EX31_RS21440	0.62	-0.3
31,779	-		EX31_RS21440	0.62	-2.3
31,964	+				+0.2
31,964	+				+0.2
31,964	+				+0.0
31,964	+				+1.2
31,964	+				-0.3
31,964	+				-0.8
31,964	+				-0.0
31,965	-				+1.0
31,965	-				-0.7
31,965	-				-0.2
31,965	-				+0.5
31,965	-				+0.2
31,965	-				-0.2
31,965	-				+0.6
31,965	-				-0.8
31,981	+				+0.1
31,981	+				-0.1
31,981	+				+0.9
31,981	+				-0.1
32,005	+				+0.8
32,023	+				+0.0
32,029	+				-1.3
32,029	+				-0.5
32,029	+				-0.2
32,030	-				-0.2
32,041	+				+0.1
32,049	+				+0.4
32,049	+				-0.0
32,049	+				+0.4
32,049	+				+0.1
32,049	+				-0.2
32,049	+				+0.2
32,050	-				-0.3
32,050	-				-0.3
32,050	-				+0.8
32,050	-				+0.6
32,054	+				-0.6
32,078	+				-0.8
32,078	+				+0.8
32,078	+				+0.1
32,078	+				+0.1
32,078	+				-0.2
32,079	-				-0.1
32,079	-				-1.0
32,079	-				+1.9
32,079	-				+0.0
32,079	-				-0.1
32,079	-				+1.5
32,082	+				+0.0
32,082	+				+0.1
32,082	+				+0.4
32,082	+				-0.3
32,082	+				-0.8
32,083	-				-0.6
32,083	-				-0.1
32,083	-				+1.4
32,104	-				+0.1
32,138	+				-0.9
32,335	+		EX31_RS21445	0.29	-0.5
32,335	+		EX31_RS21445	0.29	+0.1
32,336	-		EX31_RS21445	0.29	-1.5
32,336	-		EX31_RS21445	0.29	+0.6
32,398	-		EX31_RS21445	0.38	+0.2
32,410	+		EX31_RS21445	0.39	-0.1
32,410	+		EX31_RS21445	0.39	+0.6
32,410	+		EX31_RS21445	0.39	+0.0
32,411	-		EX31_RS21445	0.39	-0.7
32,412	+		EX31_RS21445	0.40	-0.3
32,412	+		EX31_RS21445	0.40	+0.5
32,412	+		EX31_RS21445	0.40	+0.4
32,412	+		EX31_RS21445	0.40	+0.5
32,412	+		EX31_RS21445	0.40	+0.0
32,412	+		EX31_RS21445	0.40	-0.3
32,412	+		EX31_RS21445	0.40	-0.2
32,412	+		EX31_RS21445	0.40	-0.5
32,412	+		EX31_RS21445	0.40	+0.0
32,412	+		EX31_RS21445	0.40	-0.6
32,412	+		EX31_RS21445	0.40	+0.3
32,413	-		EX31_RS21445	0.40	+0.4
32,413	-		EX31_RS21445	0.40	-0.0
32,413	-		EX31_RS21445	0.40	+1.2
32,413	-		EX31_RS21445	0.40	+1.0
32,416	+		EX31_RS21445	0.40	-0.1
32,416	+		EX31_RS21445	0.40	-0.3
32,416	+		EX31_RS21445	0.40	+0.0
32,416	+		EX31_RS21445	0.40	-0.3
32,416	+		EX31_RS21445	0.40	-0.4
32,417	-		EX31_RS21445	0.40	+0.2
32,697	+		EX31_RS21445	0.78	+0.1
32,697	+		EX31_RS21445	0.78	-0.5
32,697	+		EX31_RS21445	0.78	+0.3
32,697	+		EX31_RS21445	0.78	-0.3
32,698	-		EX31_RS21445	0.78	-0.0
32,698	-		EX31_RS21445	0.78	-0.1
32,701	+		EX31_RS21445	0.78	-0.1
32,724	+		EX31_RS21445	0.81	+0.6
32,724	+		EX31_RS21445	0.81	+0.1
32,724	+		EX31_RS21445	0.81	+0.3
32,724	+		EX31_RS21445	0.81	+0.3
32,724	+		EX31_RS21445	0.81	+0.1
32,725	-		EX31_RS21445	0.82	+0.5
32,725	-		EX31_RS21445	0.82	+0.2
32,725	-		EX31_RS21445	0.82	-0.2
32,725	-		EX31_RS21445	0.82	+2.6
32,728	+		EX31_RS21445	0.82	-0.9
32,728	+		EX31_RS21445	0.82	-0.9
32,728	+		EX31_RS21445	0.82	-0.9
32,728	+		EX31_RS21445	0.82	+0.3
32,728	+		EX31_RS21445	0.82	-0.1
32,728	+		EX31_RS21445	0.82	-0.3
32,729	-		EX31_RS21445	0.82	-1.0
32,729	-		EX31_RS21445	0.82	+0.3
32,729	-		EX31_RS21445	0.82	-0.2
32,729	-		EX31_RS21445	0.82	-1.5
32,729	-		EX31_RS21445	0.82	+0.6
32,729	-		EX31_RS21445	0.82	-0.5
32,729	-		EX31_RS21445	0.82	+0.4
32,729	-		EX31_RS21445	0.82	-0.5
32,730	+		EX31_RS21445	0.82	+0.0
32,730	+		EX31_RS21445	0.82	-0.9
32,731	-		EX31_RS21445	0.82	-0.3
32,731	-		EX31_RS21445	0.82	-0.8
32,773	+		EX31_RS21445	0.88	+0.5
32,774	-		EX31_RS21445	0.88	+0.8
32,787	+		EX31_RS21445	0.90	-0.9
32,787	+		EX31_RS21445	0.90	+0.8
32,787	+		EX31_RS21445	0.90	-0.4
32,788	-				+0.2
32,788	-				+0.5
32,817	-				+0.8
32,817	-				-1.0
32,860	+				+0.2
32,861	-				-0.2
32,921	+				+0.3
32,921	+				+1.5
32,921	+				+0.2
32,921	+				+0.4
32,921	+				-0.6
32,921	+				-1.3
32,921	+				+0.1
32,921	+				+0.7
32,921	+				+0.4
32,921	+				+0.2
32,922	-				-0.5
32,922	-				+0.9
32,922	-				+0.5
32,922	-				-0.3
32,922	-				+0.1
32,922	-				+1.1
32,922	-				-0.4
32,922	-				+0.7
32,922	-				+0.1
32,922	-				+0.1
32,922	-				+0.1
32,922	-				-0.9
32,922	-				+0.2