Strain Fitness in Rahnella sp. WP5

Strain Fitness in Rahnella sp. WP5 around EX31_RS14255

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NL-CCM; ambient oxygen
				remove
32,335	+			-0.5
32,335	+			+0.1
32,336	-	EX31_RS14250	0.10	+0.1
32,336	-	EX31_RS14250	0.10	+0.2
32,336	-	EX31_RS14250	0.10	+0.9
32,450	+	EX31_RS14250	0.22	+0.5
32,450	+	EX31_RS14250	0.22	+0.3
32,451	-	EX31_RS14250	0.22	-0.1
32,499	+	EX31_RS14250	0.28	-0.0
32,500	-	EX31_RS14250	0.28	+0.2
32,576	-	EX31_RS14250	0.36	-0.1
32,576	-	EX31_RS14250	0.36	-0.4
32,593	+	EX31_RS14250	0.38	+0.6
32,611	+	EX31_RS14250	0.40	-0.1
32,612	-	EX31_RS14250	0.40	+0.4
32,671	+	EX31_RS14250	0.46	-0.8
32,671	+	EX31_RS14250	0.46	-0.4
32,671	+	EX31_RS14250	0.46	+0.2
32,672	-	EX31_RS14250	0.46	-0.7
32,672	-	EX31_RS14250	0.46	-0.4
32,672	-	EX31_RS14250	0.46	+0.0
32,672	-	EX31_RS14250	0.46	+0.4
32,672	-	EX31_RS14250	0.46	-0.3
32,675	+	EX31_RS14250	0.47	+0.0
32,675	+	EX31_RS14250	0.47	+0.2
32,675	+	EX31_RS14250	0.47	-0.5
32,675	+	EX31_RS14250	0.47	+0.2
32,675	+	EX31_RS14250	0.47	+0.7
32,675	+	EX31_RS14250	0.47	-0.0
32,675	+	EX31_RS14250	0.47	-0.2
32,675	+	EX31_RS14250	0.47	-0.0
32,675	+	EX31_RS14250	0.47	-0.1
32,675	+	EX31_RS14250	0.47	-0.2
32,675	+	EX31_RS14250	0.47	-0.3
32,675	+	EX31_RS14250	0.47	+0.5
32,676	-	EX31_RS14250	0.47	-0.5
32,676	-	EX31_RS14250	0.47	+0.3
32,676	-	EX31_RS14250	0.47	+0.1
32,676	-	EX31_RS14250	0.47	+0.3
32,676	-	EX31_RS14250	0.47	+0.3
32,676	-	EX31_RS14250	0.47	-0.1
32,676	-	EX31_RS14250	0.47	-0.9
32,676	-	EX31_RS14250	0.47	+0.3
32,676	-	EX31_RS14250	0.47	+0.1
32,677	+	EX31_RS14250	0.47	-0.2
32,677	+	EX31_RS14250	0.47	-0.2
32,696	+	EX31_RS14250	0.49	-0.5
32,702	+	EX31_RS14250	0.50	-0.2
32,702	+	EX31_RS14250	0.50	+0.2
32,702	+	EX31_RS14250	0.50	-0.3
32,702	+	EX31_RS14250	0.50	-0.1
32,702	+	EX31_RS14250	0.50	-0.3
32,702	+	EX31_RS14250	0.50	-0.5
32,702	+	EX31_RS14250	0.50	+0.7
32,703	-	EX31_RS14250	0.50	-0.1
32,703	-	EX31_RS14250	0.50	+0.4
32,703	-	EX31_RS14250	0.50	-0.3
32,703	-	EX31_RS14250	0.50	-0.2
32,703	-	EX31_RS14250	0.50	-0.0
32,703	-	EX31_RS14250	0.50	-0.3
32,703	-	EX31_RS14250	0.50	+0.0
32,703	-	EX31_RS14250	0.50	+0.5
32,703	-	EX31_RS14250	0.50	+0.3
32,703	-	EX31_RS14250	0.50	-0.1
32,703	-	EX31_RS14250	0.50	+0.2
32,703	-	EX31_RS14250	0.50	-0.2
32,768	+	EX31_RS14250	0.57	-0.2
32,768	+	EX31_RS14250	0.57	-0.1
32,783	+	EX31_RS14250	0.58	-1.4
32,784	-	EX31_RS14250	0.58	-0.0
32,784	-	EX31_RS14250	0.58	+0.1
32,784	-	EX31_RS14250	0.58	-0.0
32,799	+	EX31_RS14250	0.60	-0.7
32,799	+	EX31_RS14250	0.60	-0.7
32,799	+	EX31_RS14250	0.60	-0.5
32,800	-	EX31_RS14250	0.60	-0.6
32,848	+	EX31_RS14250	0.65	+0.1
32,849	-	EX31_RS14250	0.65	-0.9
32,854	+	EX31_RS14250	0.66	-0.2
32,854	+	EX31_RS14250	0.66	-1.6
32,854	+	EX31_RS14250	0.66	-0.8
32,855	-	EX31_RS14250	0.66	-0.7
32,855	-	EX31_RS14250	0.66	-0.4
33,109	+			+0.1
33,109	+			+0.8
33,109	+			+1.1
33,109	+			-0.1
33,109	+			-0.2
33,109	+			-0.1
33,109	+			-1.3
33,109	+			+0.3
33,109	+			-0.2
33,109	+			+0.1
33,109	+			+0.3
33,109	+			-0.1
33,109	+			+0.9
33,110	-			-0.3
33,110	-			+0.1
33,110	-			-1.1
33,110	-			+0.3
33,110	-			+0.0
33,110	-			-0.0
33,110	-			-0.0
33,110	-			-0.3
33,114	+			-0.2
33,114	+			+0.5
33,114	+			+0.2
33,114	+			-0.3
33,114	+			+0.2
33,115	-			-0.5
33,172	-			-0.1
33,194	-			+0.1
33,214	+			-0.0
33,214	+			+0.3
33,215	-			-1.3
33,253	+			+0.4
33,253	+			-0.4
33,255	+			-0.1
33,255	+			-0.6
33,255	+			-0.2
33,255	+			-0.6
33,255	+			-0.3
33,255	+			+0.5
33,255	+			-0.3
33,255	+			-0.9
33,255	+			-0.4
33,256	-			-0.6
33,256	-			-0.4
33,256	-			-0.6
33,256	-			-0.4
33,256	-			-0.3
33,256	-			-0.1
33,256	-			-0.0
33,256	-			-0.1
33,256	-			+0.1
33,256	-			+0.1
33,256	-			-0.3
33,256	-			+0.3
33,289	+			+0.1
33,290	-			+0.2
33,290	-			-0.5
33,290	-			-1.5
33,296	+			-0.6
33,296	+			-0.2
33,296	+			+0.2
33,296	+			-0.1
33,296	+			+0.3
33,296	+			-0.1
33,297	-			-0.8
33,301	+			+0.1
33,323	+			+0.0
33,323	+			+0.4
33,323	+			+0.1
33,323	+			+0.4
33,323	+			+1.1
33,323	+			-0.3
33,323	+			+0.3
33,323	+			-0.0
33,323	+			-0.2
33,324	-			-1.0
33,324	-			+0.1
33,324	-			-0.2
33,324	-			+0.1
33,324	-			+0.1
33,324	-			-1.3
33,376	+	EX31_RS14255	0.18	+0.7
33,377	-	EX31_RS14255	0.18	-0.2
33,377	-	EX31_RS14255	0.18	-0.7
33,421	+	EX31_RS14255	0.27	+0.5
33,422	-	EX31_RS14255	0.27	+0.3
33,422	-	EX31_RS14255	0.27	+0.6
33,422	-	EX31_RS14255	0.27	-0.4
33,468	+	EX31_RS14255	0.37	-0.0
33,468	+	EX31_RS14255	0.37	+0.7
33,468	+	EX31_RS14255	0.37	+0.6
33,468	+	EX31_RS14255	0.37	+0.3
33,468	+	EX31_RS14255	0.37	+0.2
33,469	-	EX31_RS14255	0.37	+0.8
33,469	-	EX31_RS14255	0.37	-0.8
33,471	+	EX31_RS14255	0.37	+0.4
33,471	+	EX31_RS14255	0.37	+0.3
33,471	+	EX31_RS14255	0.37	+0.4
33,472	-	EX31_RS14255	0.37	-2.1
33,472	-	EX31_RS14255	0.37	-1.3
33,566	+	EX31_RS14255	0.57	+0.3
33,566	+	EX31_RS14255	0.57	+0.9
33,566	+	EX31_RS14255	0.57	+0.7
33,566	+	EX31_RS14255	0.57	+0.0
33,567	-	EX31_RS14255	0.57	+0.4
33,722	+	EX31_RS14255	0.89	+0.6
33,723	-	EX31_RS14255	0.89	-0.0
33,731	-			-0.5
33,731	-			-1.1
33,766	+			+0.5
33,830	+			-0.6
33,831	-			-0.2
33,831	-			+0.8
33,831	-			+0.4
33,838	-			+0.1
33,838	-			+0.4
33,841	+			-0.1
33,841	+			-0.1
33,841	+			-0.7
33,842	-			-0.2
33,888	+	EX31_RS14260	0.20	-0.5
33,888	+	EX31_RS14260	0.20	-1.3
33,888	+	EX31_RS14260	0.20	+0.7
33,889	-	EX31_RS14260	0.20	+0.4
33,889	-	EX31_RS14260	0.20	+0.8
33,889	-	EX31_RS14260	0.20	+0.5
34,019	+	EX31_RS14260	0.75	-0.6
34,020	-	EX31_RS14260	0.75	+0.3
34,020	-	EX31_RS14260	0.75	-0.4
34,020	-	EX31_RS14260	0.75	+0.3
34,020	-	EX31_RS14260	0.75	+0.2
34,020	-	EX31_RS14260	0.75	+0.9
34,020	-	EX31_RS14260	0.75	+0.9
34,026	-	EX31_RS14260	0.78	+0.3
34,026	-	EX31_RS14260	0.78	+0.3
34,046	+	EX31_RS14260	0.86	+0.8
34,054	-	EX31_RS14260	0.89	+0.3
34,066	-			+1.1
34,066	-			+1.2
34,093	+			+0.9
34,093	+			-1.1
34,093	+			-2.2
34,093	+			-0.7
34,093	+			-0.6
34,093	+			-0.5
34,094	-			+1.0
34,094	-			+0.0
34,094	-			+0.4
34,115	+			-0.0
34,115	+			-0.6
34,115	+			-0.7
34,115	+			-0.7
34,115	+			-0.4
34,115	+			-2.2
34,115	+			-0.2
34,115	+			-0.7
34,115	+			-0.3
34,115	+			+0.4
34,115	+			-0.3
34,115	+			+0.0
34,115	+			+0.2
34,115	+			-0.0
34,115	+			-0.7
34,115	+			-0.4
34,116	-			+0.8
34,116	-			+0.2
34,116	-			+0.8
34,116	-			+0.9
34,116	-			+0.3
34,116	-			+0.4
34,116	-			-0.4
34,116	-			+0.4
34,116	-			+0.8
34,116	-			+0.3
34,116	-			+0.3
34,116	-			+0.6
34,116	-			+0.8
34,116	-			+0.2
34,116	-			+0.2
34,116	-			+0.2
34,116	-			+0.2
34,116	-			+0.4
34,116	-			+0.6
34,116	-			+0.1
34,116	-			+0.3
34,116	-			+0.4
34,216	+			-0.0
34,216	+			-0.8
34,229	+			-0.9
34,229	+			-0.4
34,229	+			-0.4
34,229	+			+0.0
34,229	+			-0.4
34,230	-			+0.0
34,230	-			-0.2
34,230	-			+0.3
34,230	-			+0.0
34,230	-			+0.4
34,230	-			+0.0
34,230	-			-0.2
34,230	-			-0.9
34,233	+			+0.1
34,233	+			-0.3
34,233	+			+0.1
34,234	-			-0.4
34,291	-			-1.3
34,343	+			-0.0
34,344	-			+0.2
34,344	-			-0.2
34,344	-			-0.3
34,350	+			+0.2
34,350	+			-0.0
34,427	-			-0.5
34,486	-			-0.1
34,526	+			-0.6
34,527	-			+0.6
34,552	+			+0.8
34,552	+			+0.7
34,552	+			-0.0
34,552	+			-0.2
34,552	+			+0.7
34,553	-			+1.1
34,553	-			+0.5
34,553	-			+0.6
34,553	-			+0.3
34,564	+			+0.4
34,565	-			+0.7
34,565	-			-0.2
34,588	+			+0.3
34,605	+			-0.1
34,605	+			-0.1
34,605	+			+0.2
34,606	-			-0.5
34,606	-			+0.4
34,619	+			+0.1
34,631	-			-0.8
34,656	+			+0.1
34,656	+			+0.5
34,656	+			-0.2
34,656	+			-0.2
34,656	+			-2.0
34,656	+			+0.9
34,656	+			-0.3
34,656	+			-1.6
34,656	+			+0.1
34,656	+			+0.2
34,657	-			-0.8
34,657	-			-0.0
34,657	-			+0.8
34,657	-			+0.1
34,657	-			+0.4
34,657	-			-0.3
34,682	+			+0.4
34,682	+			+0.1
34,683	-			-0.1
34,683	-			-0.7
34,683	-			+0.0
34,683	-			+0.0

Or see this region's nucleotide sequence