Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS25695 and EX31_RS24825 are separated by 516 nucleotides EX31_RS24825 and EX31_RS24830 overlap by 1 nucleotides
EX31_RS25695: EX31_RS25695 - DUF1883 domain-containing protein, at 737,568 to 737,825
_RS25695
EX31_RS24825: EX31_RS24825 - WG repeat-containing protein, at 738,342 to 741,104
_RS24825
EX31_RS24830: EX31_RS24830 - WG repeat-containing protein, at 741,104 to 743,944
_RS24830
Position (kb) 738
739
740
741
742 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 737.366 kb on + strand at 737.367 kb on - strand at 737.491 kb on + strand at 737.556 kb on + strand at 737.557 kb on - strand at 737.557 kb on - strand at 737.579 kb on + strand at 737.579 kb on + strand at 737.579 kb on + strand at 737.579 kb on + strand at 737.580 kb on - strand at 737.580 kb on - strand at 737.580 kb on - strand at 737.581 kb on + strand at 737.582 kb on - strand at 737.582 kb on - strand at 737.582 kb on - strand at 737.582 kb on - strand at 737.582 kb on - strand at 737.582 kb on - strand at 737.586 kb on + strand at 737.586 kb on + strand at 737.586 kb on + strand at 737.587 kb on - strand at 737.642 kb on + strand, within EX31_RS25695 at 737.643 kb on - strand, within EX31_RS25695 at 737.644 kb on + strand, within EX31_RS25695 at 737.645 kb on - strand, within EX31_RS25695 at 737.645 kb on - strand, within EX31_RS25695 at 737.645 kb on - strand, within EX31_RS25695 at 737.645 kb on - strand, within EX31_RS25695 at 737.645 kb on - strand, within EX31_RS25695 at 737.659 kb on + strand, within EX31_RS25695 at 737.659 kb on + strand, within EX31_RS25695 at 737.660 kb on - strand, within EX31_RS25695 at 737.772 kb on + strand, within EX31_RS25695 at 737.772 kb on + strand, within EX31_RS25695 at 737.772 kb on + strand, within EX31_RS25695 at 737.772 kb on + strand, within EX31_RS25695 at 737.772 kb on + strand, within EX31_RS25695 at 737.772 kb on + strand, within EX31_RS25695 at 737.772 kb on + strand, within EX31_RS25695 at 737.772 kb on + strand, within EX31_RS25695 at 737.773 kb on - strand, within EX31_RS25695 at 737.773 kb on - strand, within EX31_RS25695 at 737.838 kb on + strand at 737.839 kb on - strand at 737.844 kb on - strand at 737.844 kb on - strand at 737.844 kb on - strand at 737.857 kb on + strand at 737.857 kb on + strand at 737.857 kb on + strand at 737.857 kb on + strand at 737.858 kb on - strand at 737.858 kb on - strand at 737.858 kb on - strand at 737.858 kb on - strand at 737.858 kb on - strand at 737.864 kb on + strand at 737.934 kb on + strand at 737.936 kb on + strand at 737.962 kb on - strand at 737.983 kb on + strand at 737.983 kb on + strand at 737.983 kb on + strand at 737.984 kb on - strand at 737.987 kb on - strand at 738.001 kb on + strand at 738.002 kb on - strand at 738.026 kb on + strand at 738.026 kb on + strand at 738.026 kb on + strand at 738.026 kb on + strand at 738.026 kb on + strand at 738.026 kb on + strand at 738.027 kb on - strand at 738.027 kb on - strand at 738.041 kb on + strand at 738.041 kb on + strand at 738.042 kb on - strand at 738.042 kb on - strand at 738.049 kb on - strand at 738.051 kb on + strand at 738.093 kb on + strand at 738.144 kb on + strand at 738.144 kb on + strand at 738.144 kb on + strand at 738.144 kb on + strand at 738.144 kb on + strand at 738.145 kb on - strand at 738.145 kb on - strand at 738.145 kb on - strand at 738.148 kb on + strand at 738.149 kb on - strand at 738.149 kb on - strand at 738.149 kb on - strand at 738.166 kb on + strand at 738.169 kb on + strand at 738.169 kb on + strand at 738.174 kb on + strand at 738.175 kb on - strand at 738.205 kb on + strand at 738.205 kb on + strand at 738.207 kb on + strand at 738.242 kb on + strand at 738.328 kb on + strand at 738.329 kb on - strand at 738.330 kb on + strand at 738.331 kb on - strand at 738.455 kb on + strand at 738.456 kb on - strand at 738.456 kb on - strand at 738.549 kb on + strand at 738.569 kb on + strand at 738.569 kb on + strand at 738.569 kb on + strand at 738.569 kb on + strand at 738.569 kb on + strand at 738.570 kb on - strand at 738.651 kb on + strand, within EX31_RS24825 at 738.651 kb on + strand, within EX31_RS24825 at 738.651 kb on + strand, within EX31_RS24825 at 738.651 kb on + strand, within EX31_RS24825 at 738.653 kb on + strand, within EX31_RS24825 at 738.653 kb on + strand, within EX31_RS24825 at 738.654 kb on - strand, within EX31_RS24825 at 738.686 kb on + strand, within EX31_RS24825 at 738.687 kb on - strand, within EX31_RS24825 at 738.754 kb on + strand, within EX31_RS24825 at 739.064 kb on + strand, within EX31_RS24825 at 739.065 kb on - strand, within EX31_RS24825 at 739.148 kb on + strand, within EX31_RS24825 at 739.148 kb on + strand, within EX31_RS24825 at 739.148 kb on + strand, within EX31_RS24825 at 739.148 kb on + strand, within EX31_RS24825 at 739.148 kb on + strand, within EX31_RS24825 at 739.148 kb on + strand, within EX31_RS24825 at 739.149 kb on - strand, within EX31_RS24825 at 739.156 kb on + strand, within EX31_RS24825 at 739.175 kb on + strand, within EX31_RS24825 at 739.175 kb on + strand, within EX31_RS24825 at 739.175 kb on + strand, within EX31_RS24825 at 739.175 kb on + strand, within EX31_RS24825 at 739.199 kb on + strand, within EX31_RS24825 at 739.224 kb on - strand, within EX31_RS24825 at 739.290 kb on - strand, within EX31_RS24825 at 739.361 kb on + strand, within EX31_RS24825 at 739.441 kb on - strand, within EX31_RS24825 at 739.505 kb on - strand, within EX31_RS24825 at 739.806 kb on + strand, within EX31_RS24825 at 739.806 kb on + strand, within EX31_RS24825 at 739.807 kb on - strand, within EX31_RS24825 at 739.808 kb on + strand, within EX31_RS24825 at 739.808 kb on + strand, within EX31_RS24825 at 739.808 kb on + strand, within EX31_RS24825 at 739.809 kb on - strand, within EX31_RS24825 at 739.809 kb on - strand, within EX31_RS24825 at 739.835 kb on + strand, within EX31_RS24825 at 739.835 kb on + strand, within EX31_RS24825 at 739.835 kb on + strand, within EX31_RS24825 at 739.853 kb on + strand, within EX31_RS24825 at 739.854 kb on - strand, within EX31_RS24825 at 739.892 kb on + strand, within EX31_RS24825 at 739.892 kb on + strand, within EX31_RS24825 at 739.935 kb on + strand, within EX31_RS24825 at 739.936 kb on - strand, within EX31_RS24825 at 739.972 kb on + strand, within EX31_RS24825 at 740.063 kb on + strand, within EX31_RS24825 at 740.063 kb on + strand, within EX31_RS24825 at 740.129 kb on + strand, within EX31_RS24825 at 740.140 kb on - strand, within EX31_RS24825 at 740.159 kb on + strand, within EX31_RS24825 at 740.220 kb on + strand, within EX31_RS24825 at 740.220 kb on + strand, within EX31_RS24825 at 740.220 kb on + strand, within EX31_RS24825 at 740.367 kb on - strand, within EX31_RS24825 at 740.367 kb on - strand, within EX31_RS24825 at 740.402 kb on + strand, within EX31_RS24825 at 740.469 kb on + strand, within EX31_RS24825 at 740.469 kb on + strand, within EX31_RS24825 at 740.469 kb on + strand, within EX31_RS24825 at 740.470 kb on - strand, within EX31_RS24825 at 740.470 kb on - strand, within EX31_RS24825 at 740.501 kb on + strand, within EX31_RS24825 at 740.543 kb on + strand, within EX31_RS24825 at 740.630 kb on + strand, within EX31_RS24825 at 740.630 kb on + strand, within EX31_RS24825 at 740.630 kb on + strand, within EX31_RS24825 at 740.630 kb on + strand, within EX31_RS24825 at 740.630 kb on + strand, within EX31_RS24825 at 740.630 kb on + strand, within EX31_RS24825 at 740.631 kb on - strand, within EX31_RS24825 at 740.631 kb on - strand, within EX31_RS24825 at 740.649 kb on + strand, within EX31_RS24825 at 740.649 kb on + strand, within EX31_RS24825 at 740.649 kb on + strand, within EX31_RS24825 at 740.649 kb on + strand, within EX31_RS24825 at 740.649 kb on + strand, within EX31_RS24825 at 740.649 kb on + strand, within EX31_RS24825 at 740.649 kb on + strand, within EX31_RS24825 at 740.649 kb on + strand, within EX31_RS24825 at 740.650 kb on - strand, within EX31_RS24825 at 740.708 kb on + strand, within EX31_RS24825 at 740.741 kb on + strand, within EX31_RS24825 at 740.754 kb on + strand, within EX31_RS24825 at 740.856 kb on + strand at 740.856 kb on + strand at 740.874 kb on + strand at 740.874 kb on + strand at 740.874 kb on + strand at 740.874 kb on + strand at 740.874 kb on + strand at 740.874 kb on + strand at 740.874 kb on + strand at 740.874 kb on + strand at 740.874 kb on + strand at 740.875 kb on - strand at 740.882 kb on + strand at 740.882 kb on + strand at 740.882 kb on + strand at 740.882 kb on + strand at 740.883 kb on - strand at 741.023 kb on + strand at 741.047 kb on + strand at 741.057 kb on + strand at 741.057 kb on + strand at 741.057 kb on + strand at 741.098 kb on + strand at 741.098 kb on + strand at 741.098 kb on + strand at 741.099 kb on - strand at 741.099 kb on - strand at 741.099 kb on - strand at 741.102 kb on + strand at 741.102 kb on + strand at 741.103 kb on - strand at 741.103 kb on - strand at 741.103 kb on - strand at 741.157 kb on + strand at 741.166 kb on + strand at 741.166 kb on + strand at 741.166 kb on + strand at 741.166 kb on + strand at 741.166 kb on + strand at 741.166 kb on + strand at 741.167 kb on - strand at 741.167 kb on - strand at 741.167 kb on - strand at 741.265 kb on + strand at 741.265 kb on + strand at 741.266 kb on - strand at 741.266 kb on - strand at 741.266 kb on - strand at 741.291 kb on + strand at 741.291 kb on + strand at 741.291 kb on + strand at 741.295 kb on + strand at 741.295 kb on + strand at 741.296 kb on - strand at 741.397 kb on + strand, within EX31_RS24830 at 741.565 kb on + strand, within EX31_RS24830 at 741.578 kb on - strand, within EX31_RS24830 at 741.621 kb on + strand, within EX31_RS24830 at 741.815 kb on - strand, within EX31_RS24830 at 741.837 kb on - strand, within EX31_RS24830 at 741.837 kb on - strand, within EX31_RS24830 at 741.906 kb on + strand, within EX31_RS24830 at 741.941 kb on + strand, within EX31_RS24830 at 741.941 kb on + strand, within EX31_RS24830 at 741.941 kb on + strand, within EX31_RS24830 at 741.941 kb on + strand, within EX31_RS24830 at 741.941 kb on + strand, within EX31_RS24830 at 741.941 kb on + strand, within EX31_RS24830 at 741.941 kb on + strand, within EX31_RS24830 at 741.942 kb on - strand, within EX31_RS24830 at 741.942 kb on - strand, within EX31_RS24830 at 741.942 kb on - strand, within EX31_RS24830 at 741.942 kb on - strand, within EX31_RS24830 at 742.005 kb on + strand, within EX31_RS24830 at 742.005 kb on + strand, within EX31_RS24830 at 742.005 kb on + strand, within EX31_RS24830 at 742.005 kb on + strand, within EX31_RS24830 at 742.005 kb on + strand, within EX31_RS24830 at 742.079 kb on + strand, within EX31_RS24830 at 742.079 kb on + strand, within EX31_RS24830 at 742.079 kb on + strand, within EX31_RS24830 at 742.080 kb on - strand, within EX31_RS24830 at 742.080 kb on - strand, within EX31_RS24830
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 737,366 + -0.1 737,367 - +0.4 737,491 + -0.9 737,556 + +0.6 737,557 - -0.3 737,557 - -0.2 737,579 + +0.0 737,579 + -0.7 737,579 + -0.5 737,579 + +0.3 737,580 - -0.1 737,580 - +1.0 737,580 - +0.4 737,581 + +0.6 737,582 - -0.1 737,582 - -0.0 737,582 - -1.6 737,582 - +0.2 737,582 - -0.4 737,582 - -0.0 737,586 + -1.5 737,586 + +0.0 737,586 + -0.4 737,587 - -0.3 737,642 + EX31_RS25695 0.29 -0.6 737,643 - EX31_RS25695 0.29 -1.4 737,644 + EX31_RS25695 0.29 -1.9 737,645 - EX31_RS25695 0.30 -1.1 737,645 - EX31_RS25695 0.30 -1.1 737,645 - EX31_RS25695 0.30 -0.6 737,645 - EX31_RS25695 0.30 -0.7 737,645 - EX31_RS25695 0.30 +0.5 737,659 + EX31_RS25695 0.35 +0.3 737,659 + EX31_RS25695 0.35 -0.7 737,660 - EX31_RS25695 0.36 -1.0 737,772 + EX31_RS25695 0.79 -1.1 737,772 + EX31_RS25695 0.79 -0.1 737,772 + EX31_RS25695 0.79 -2.0 737,772 + EX31_RS25695 0.79 -1.0 737,772 + EX31_RS25695 0.79 +1.6 737,772 + EX31_RS25695 0.79 -0.6 737,772 + EX31_RS25695 0.79 -1.0 737,772 + EX31_RS25695 0.79 -0.3 737,773 - EX31_RS25695 0.79 +1.0 737,773 - EX31_RS25695 0.79 +0.7 737,838 + -0.3 737,839 - -0.1 737,844 - +0.6 737,844 - -1.7 737,844 - -2.3 737,857 + +1.0 737,857 + +0.2 737,857 + -1.0 737,857 + -0.8 737,858 - +1.7 737,858 - -0.3 737,858 - -0.7 737,858 - -0.4 737,858 - +0.9 737,864 + +0.3 737,934 + +1.1 737,936 + +0.1 737,962 - +0.3 737,983 + -0.1 737,983 + -0.1 737,983 + +1.3 737,984 - +1.2 737,987 - -0.6 738,001 + +1.4 738,002 - -0.0 738,026 + +0.5 738,026 + -0.6 738,026 + -1.0 738,026 + +0.2 738,026 + +0.3 738,026 + +0.4 738,027 - -0.2 738,027 - +0.0 738,041 + -0.5 738,041 + +0.6 738,042 - -0.8 738,042 - -0.6 738,049 - -0.7 738,051 + -0.8 738,093 + +1.6 738,144 + +1.0 738,144 + +0.6 738,144 + -0.0 738,144 + +0.0 738,144 + +0.2 738,145 - -1.2 738,145 - -2.4 738,145 - -1.1 738,148 + -0.7 738,149 - -1.2 738,149 - +0.1 738,149 - -0.8 738,166 + +0.5 738,169 + -0.6 738,169 + -0.8 738,174 + -0.0 738,175 - +0.5 738,205 + -0.3 738,205 + +0.1 738,207 + -2.8 738,242 + -0.1 738,328 + -0.9 738,329 - +0.3 738,330 + +0.2 738,331 - -0.1 738,455 + +0.6 738,456 - +0.6 738,456 - -1.9 738,549 + +0.3 738,569 + +1.0 738,569 + +0.2 738,569 + -0.5 738,569 + +1.2 738,569 + -1.1 738,570 - -0.3 738,651 + EX31_RS24825 0.11 -1.1 738,651 + EX31_RS24825 0.11 -0.5 738,651 + EX31_RS24825 0.11 +0.2 738,651 + EX31_RS24825 0.11 -1.5 738,653 + EX31_RS24825 0.11 -0.1 738,653 + EX31_RS24825 0.11 -1.3 738,654 - EX31_RS24825 0.11 +0.8 738,686 + EX31_RS24825 0.12 -1.0 738,687 - EX31_RS24825 0.12 -1.7 738,754 + EX31_RS24825 0.15 -0.8 739,064 + EX31_RS24825 0.26 -1.9 739,065 - EX31_RS24825 0.26 -1.2 739,148 + EX31_RS24825 0.29 -0.6 739,148 + EX31_RS24825 0.29 -0.1 739,148 + EX31_RS24825 0.29 -0.9 739,148 + EX31_RS24825 0.29 -1.7 739,148 + EX31_RS24825 0.29 +1.4 739,148 + EX31_RS24825 0.29 +0.5 739,149 - EX31_RS24825 0.29 -0.2 739,156 + EX31_RS24825 0.29 -0.1 739,175 + EX31_RS24825 0.30 +0.5 739,175 + EX31_RS24825 0.30 -0.6 739,175 + EX31_RS24825 0.30 +0.5 739,175 + EX31_RS24825 0.30 -0.9 739,199 + EX31_RS24825 0.31 -1.0 739,224 - EX31_RS24825 0.32 +0.9 739,290 - EX31_RS24825 0.34 -1.3 739,361 + EX31_RS24825 0.37 -0.9 739,441 - EX31_RS24825 0.40 +0.4 739,505 - EX31_RS24825 0.42 -0.5 739,806 + EX31_RS24825 0.53 -0.4 739,806 + EX31_RS24825 0.53 +1.4 739,807 - EX31_RS24825 0.53 -0.2 739,808 + EX31_RS24825 0.53 +1.8 739,808 + EX31_RS24825 0.53 -0.3 739,808 + EX31_RS24825 0.53 -0.9 739,809 - EX31_RS24825 0.53 -2.2 739,809 - EX31_RS24825 0.53 -0.8 739,835 + EX31_RS24825 0.54 -1.2 739,835 + EX31_RS24825 0.54 -2.0 739,835 + EX31_RS24825 0.54 +0.3 739,853 + EX31_RS24825 0.55 +0.3 739,854 - EX31_RS24825 0.55 +1.3 739,892 + EX31_RS24825 0.56 +0.1 739,892 + EX31_RS24825 0.56 -0.1 739,935 + EX31_RS24825 0.58 -0.3 739,936 - EX31_RS24825 0.58 -2.6 739,972 + EX31_RS24825 0.59 -1.0 740,063 + EX31_RS24825 0.62 -0.5 740,063 + EX31_RS24825 0.62 +0.2 740,129 + EX31_RS24825 0.65 -0.2 740,140 - EX31_RS24825 0.65 -0.5 740,159 + EX31_RS24825 0.66 -0.9 740,220 + EX31_RS24825 0.68 -0.2 740,220 + EX31_RS24825 0.68 -0.6 740,220 + EX31_RS24825 0.68 -2.2 740,367 - EX31_RS24825 0.73 +0.7 740,367 - EX31_RS24825 0.73 -1.7 740,402 + EX31_RS24825 0.75 -0.2 740,469 + EX31_RS24825 0.77 +0.7 740,469 + EX31_RS24825 0.77 -0.0 740,469 + EX31_RS24825 0.77 +1.2 740,470 - EX31_RS24825 0.77 -1.2 740,470 - EX31_RS24825 0.77 -0.1 740,501 + EX31_RS24825 0.78 +0.4 740,543 + EX31_RS24825 0.80 +0.1 740,630 + EX31_RS24825 0.83 -1.8 740,630 + EX31_RS24825 0.83 +0.2 740,630 + EX31_RS24825 0.83 -1.0 740,630 + EX31_RS24825 0.83 +0.9 740,630 + EX31_RS24825 0.83 +0.1 740,630 + EX31_RS24825 0.83 -0.7 740,631 - EX31_RS24825 0.83 -1.6 740,631 - EX31_RS24825 0.83 +1.0 740,649 + EX31_RS24825 0.83 +0.2 740,649 + EX31_RS24825 0.83 +0.3 740,649 + EX31_RS24825 0.83 -1.8 740,649 + EX31_RS24825 0.83 +1.0 740,649 + EX31_RS24825 0.83 -1.7 740,649 + EX31_RS24825 0.83 +0.5 740,649 + EX31_RS24825 0.83 -0.2 740,649 + EX31_RS24825 0.83 -0.8 740,650 - EX31_RS24825 0.84 -0.3 740,708 + EX31_RS24825 0.86 +0.6 740,741 + EX31_RS24825 0.87 +0.0 740,754 + EX31_RS24825 0.87 +0.3 740,856 + +0.1 740,856 + +0.8 740,874 + +0.1 740,874 + -0.2 740,874 + +1.1 740,874 + -0.2 740,874 + -0.6 740,874 + +0.5 740,874 + +1.5 740,874 + +0.1 740,874 + +0.2 740,875 - -0.7 740,882 + -0.4 740,882 + -3.0 740,882 + +1.8 740,882 + +0.5 740,883 - -1.1 741,023 + +0.7 741,047 + +0.6 741,057 + +0.2 741,057 + -0.2 741,057 + +0.6 741,098 + -0.4 741,098 + +0.5 741,098 + -1.1 741,099 - -0.5 741,099 - -1.8 741,099 - -0.4 741,102 + -0.2 741,102 + +1.0 741,103 - -1.7 741,103 - -1.4 741,103 - +0.6 741,157 + -0.4 741,166 + -1.6 741,166 + +0.5 741,166 + +0.3 741,166 + -0.6 741,166 + +0.2 741,166 + +1.0 741,167 - +0.2 741,167 - -0.7 741,167 - +0.5 741,265 + +1.0 741,265 + -0.2 741,266 - -1.3 741,266 - -1.3 741,266 - -0.5 741,291 + +0.0 741,291 + -0.6 741,291 + -1.4 741,295 + -1.0 741,295 + +0.0 741,296 - -1.1 741,397 + EX31_RS24830 0.10 +0.4 741,565 + EX31_RS24830 0.16 -1.3 741,578 - EX31_RS24830 0.17 +1.1 741,621 + EX31_RS24830 0.18 -0.4 741,815 - EX31_RS24830 0.25 -0.1 741,837 - EX31_RS24830 0.26 -0.1 741,837 - EX31_RS24830 0.26 +0.4 741,906 + EX31_RS24830 0.28 -0.1 741,941 + EX31_RS24830 0.29 -0.6 741,941 + EX31_RS24830 0.29 -0.8 741,941 + EX31_RS24830 0.29 +0.1 741,941 + EX31_RS24830 0.29 +1.5 741,941 + EX31_RS24830 0.29 -0.0 741,941 + EX31_RS24830 0.29 -0.0 741,941 + EX31_RS24830 0.29 -0.7 741,942 - EX31_RS24830 0.29 -0.9 741,942 - EX31_RS24830 0.29 -0.3 741,942 - EX31_RS24830 0.29 -0.4 741,942 - EX31_RS24830 0.29 +1.8 742,005 + EX31_RS24830 0.32 +0.1 742,005 + EX31_RS24830 0.32 -0.0 742,005 + EX31_RS24830 0.32 -0.3 742,005 + EX31_RS24830 0.32 +0.5 742,005 + EX31_RS24830 0.32 -0.6 742,079 + EX31_RS24830 0.34 +0.5 742,079 + EX31_RS24830 0.34 -1.3 742,079 + EX31_RS24830 0.34 -0.8 742,080 - EX31_RS24830 0.34 +0.2 742,080 - EX31_RS24830 0.34 -0.8
Or see this region's nucleotide sequence