Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS18765 and EX31_RS18770 are separated by 2 nucleotides EX31_RS18770 and EX31_RS18775 are separated by 182 nucleotides
EX31_RS18765: EX31_RS18765 - molybdopterin molybdotransferase MoeA, at 337,643 to 338,884
_RS18765
EX31_RS18770: EX31_RS18770 - molybdopterin-synthase adenylyltransferase MoeB, at 338,887 to 339,648
_RS18770
EX31_RS18775: EX31_RS18775 - ABC-F family ATPase, at 339,831 to 341,423
_RS18775
Position (kb) 338
339
340 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 337.983 kb on + strand, within EX31_RS18765 at 337.983 kb on + strand, within EX31_RS18765 at 337.983 kb on + strand, within EX31_RS18765 at 337.983 kb on + strand, within EX31_RS18765 at 337.984 kb on - strand, within EX31_RS18765 at 337.984 kb on - strand, within EX31_RS18765 at 337.984 kb on - strand, within EX31_RS18765 at 338.022 kb on + strand, within EX31_RS18765 at 338.023 kb on - strand, within EX31_RS18765 at 338.023 kb on - strand, within EX31_RS18765 at 338.080 kb on + strand, within EX31_RS18765 at 338.112 kb on + strand, within EX31_RS18765 at 338.112 kb on + strand, within EX31_RS18765 at 338.112 kb on + strand, within EX31_RS18765 at 338.113 kb on - strand, within EX31_RS18765 at 338.113 kb on - strand, within EX31_RS18765 at 338.113 kb on - strand, within EX31_RS18765 at 338.196 kb on + strand, within EX31_RS18765 at 338.255 kb on + strand, within EX31_RS18765 at 338.255 kb on + strand, within EX31_RS18765 at 338.256 kb on - strand, within EX31_RS18765 at 338.256 kb on - strand, within EX31_RS18765 at 338.305 kb on + strand, within EX31_RS18765 at 338.306 kb on - strand, within EX31_RS18765 at 338.320 kb on - strand, within EX31_RS18765 at 338.429 kb on + strand, within EX31_RS18765 at 338.430 kb on - strand, within EX31_RS18765 at 338.576 kb on + strand, within EX31_RS18765 at 338.576 kb on + strand, within EX31_RS18765 at 338.577 kb on - strand, within EX31_RS18765 at 338.596 kb on + strand, within EX31_RS18765 at 338.597 kb on - strand, within EX31_RS18765 at 338.597 kb on - strand, within EX31_RS18765 at 338.770 kb on - strand at 338.801 kb on - strand at 338.864 kb on - strand at 338.886 kb on + strand at 338.886 kb on + strand at 338.887 kb on - strand at 338.929 kb on + strand at 338.929 kb on + strand at 338.930 kb on - strand at 338.930 kb on - strand at 338.930 kb on - strand at 338.930 kb on - strand at 338.931 kb on + strand at 338.932 kb on - strand at 339.041 kb on - strand, within EX31_RS18770 at 339.063 kb on + strand, within EX31_RS18770 at 339.064 kb on - strand, within EX31_RS18770 at 339.391 kb on + strand, within EX31_RS18770 at 339.391 kb on + strand, within EX31_RS18770 at 339.392 kb on - strand, within EX31_RS18770 at 339.482 kb on + strand, within EX31_RS18770 at 339.504 kb on - strand, within EX31_RS18770 at 339.702 kb on - strand at 339.704 kb on + strand at 339.704 kb on + strand at 339.705 kb on - strand at 339.705 kb on - strand at 339.705 kb on - strand at 339.705 kb on - strand at 339.705 kb on - strand at 339.713 kb on + strand at 339.714 kb on - strand at 339.729 kb on + strand at 339.730 kb on - strand at 339.730 kb on - strand at 339.764 kb on + strand at 339.764 kb on + strand at 339.764 kb on + strand at 339.764 kb on + strand at 339.764 kb on + strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.765 kb on - strand at 339.772 kb on + strand at 339.772 kb on + strand at 339.772 kb on + strand at 339.773 kb on - strand at 339.773 kb on - strand at 339.773 kb on - strand at 339.773 kb on - strand at 339.773 kb on - strand at 339.773 kb on - strand at 339.773 kb on - strand at 339.773 kb on - strand at 339.773 kb on - strand at 339.773 kb on - strand at 339.833 kb on - strand at 339.833 kb on - strand at 339.833 kb on - strand at 339.856 kb on + strand at 339.856 kb on + strand at 339.857 kb on - strand at 339.857 kb on - strand at 339.865 kb on + strand at 339.866 kb on - strand at 339.866 kb on - strand at 339.965 kb on + strand at 339.966 kb on - strand at 339.966 kb on - strand at 339.966 kb on - strand at 339.966 kb on - strand at 339.966 kb on - strand at 339.966 kb on - strand at 339.966 kb on - strand at 339.974 kb on - strand at 339.974 kb on - strand at 340.081 kb on - strand, within EX31_RS18775 at 340.085 kb on + strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.086 kb on - strand, within EX31_RS18775 at 340.110 kb on + strand, within EX31_RS18775 at 340.110 kb on + strand, within EX31_RS18775 at 340.111 kb on - strand, within EX31_RS18775 at 340.159 kb on - strand, within EX31_RS18775 at 340.159 kb on - strand, within EX31_RS18775 at 340.247 kb on - strand, within EX31_RS18775 at 340.296 kb on + strand, within EX31_RS18775 at 340.297 kb on - strand, within EX31_RS18775 at 340.297 kb on - strand, within EX31_RS18775 at 340.353 kb on - strand, within EX31_RS18775 at 340.473 kb on - strand, within EX31_RS18775 at 340.507 kb on + strand, within EX31_RS18775 at 340.507 kb on + strand, within EX31_RS18775 at 340.507 kb on + strand, within EX31_RS18775 at 340.507 kb on + strand, within EX31_RS18775
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 337,983 + EX31_RS18765 0.27 -0.1 337,983 + EX31_RS18765 0.27 +1.7 337,983 + EX31_RS18765 0.27 -0.7 337,983 + EX31_RS18765 0.27 -0.1 337,984 - EX31_RS18765 0.27 +1.7 337,984 - EX31_RS18765 0.27 -0.5 337,984 - EX31_RS18765 0.27 +1.4 338,022 + EX31_RS18765 0.31 +0.4 338,023 - EX31_RS18765 0.31 +0.7 338,023 - EX31_RS18765 0.31 +0.6 338,080 + EX31_RS18765 0.35 +0.5 338,112 + EX31_RS18765 0.38 +0.5 338,112 + EX31_RS18765 0.38 +0.1 338,112 + EX31_RS18765 0.38 -0.1 338,113 - EX31_RS18765 0.38 +1.4 338,113 - EX31_RS18765 0.38 -0.8 338,113 - EX31_RS18765 0.38 -0.3 338,196 + EX31_RS18765 0.45 +0.6 338,255 + EX31_RS18765 0.49 +1.0 338,255 + EX31_RS18765 0.49 +0.4 338,256 - EX31_RS18765 0.49 +1.6 338,256 - EX31_RS18765 0.49 -2.1 338,305 + EX31_RS18765 0.53 +0.7 338,306 - EX31_RS18765 0.53 +1.3 338,320 - EX31_RS18765 0.55 +1.2 338,429 + EX31_RS18765 0.63 +0.2 338,430 - EX31_RS18765 0.63 +0.5 338,576 + EX31_RS18765 0.75 +0.2 338,576 + EX31_RS18765 0.75 -0.1 338,577 - EX31_RS18765 0.75 -0.4 338,596 + EX31_RS18765 0.77 +0.2 338,597 - EX31_RS18765 0.77 -0.5 338,597 - EX31_RS18765 0.77 +0.7 338,770 - +0.8 338,801 - +0.1 338,864 - +0.3 338,886 + +0.1 338,886 + +0.7 338,887 - +1.0 338,929 + +1.5 338,929 + +0.9 338,930 - +0.1 338,930 - +0.3 338,930 - -1.0 338,930 - +0.7 338,931 + -0.6 338,932 - +0.5 339,041 - EX31_RS18770 0.20 +0.0 339,063 + EX31_RS18770 0.23 +0.5 339,064 - EX31_RS18770 0.23 +2.1 339,391 + EX31_RS18770 0.66 +0.0 339,391 + EX31_RS18770 0.66 +0.6 339,392 - EX31_RS18770 0.66 +0.9 339,482 + EX31_RS18770 0.78 +1.0 339,504 - EX31_RS18770 0.81 +0.2 339,702 - +0.2 339,704 + -1.1 339,704 + -0.8 339,705 - -2.8 339,705 - -0.9 339,705 - +1.3 339,705 - -0.3 339,705 - -0.1 339,713 + -0.7 339,714 - +0.4 339,729 + +1.6 339,730 - +0.4 339,730 - -0.9 339,764 + +0.9 339,764 + -0.4 339,764 + -0.8 339,764 + +0.8 339,764 + -0.2 339,765 - -0.6 339,765 - +0.2 339,765 - -0.4 339,765 - +1.0 339,765 - -1.0 339,765 - -1.5 339,765 - -0.2 339,765 - -0.5 339,765 - +0.3 339,765 - -0.2 339,765 - +0.0 339,765 - +1.3 339,765 - +0.8 339,765 - -0.1 339,765 - -0.8 339,765 - -0.2 339,765 - -1.6 339,772 + -1.8 339,772 + -1.0 339,772 + -0.1 339,773 - +0.1 339,773 - +0.1 339,773 - -0.5 339,773 - +0.4 339,773 - -2.4 339,773 - +0.2 339,773 - -0.8 339,773 - -0.7 339,773 - -1.8 339,773 - +0.7 339,833 - +1.5 339,833 - -0.0 339,833 - +0.9 339,856 + -1.0 339,856 + -1.1 339,857 - -0.8 339,857 - +0.1 339,865 + +0.6 339,866 - +0.9 339,866 - -1.3 339,965 + -3.1 339,966 - -0.6 339,966 - +0.2 339,966 - -0.6 339,966 - -2.7 339,966 - -0.2 339,966 - -0.3 339,966 - -0.5 339,974 - -0.5 339,974 - +0.1 340,081 - EX31_RS18775 0.16 +0.2 340,085 + EX31_RS18775 0.16 -0.9 340,086 - EX31_RS18775 0.16 +0.2 340,086 - EX31_RS18775 0.16 +0.3 340,086 - EX31_RS18775 0.16 -0.3 340,086 - EX31_RS18775 0.16 +0.0 340,086 - EX31_RS18775 0.16 -0.3 340,086 - EX31_RS18775 0.16 +0.8 340,086 - EX31_RS18775 0.16 -0.9 340,086 - EX31_RS18775 0.16 -0.8 340,086 - EX31_RS18775 0.16 +0.0 340,086 - EX31_RS18775 0.16 -0.2 340,086 - EX31_RS18775 0.16 +0.6 340,110 + EX31_RS18775 0.18 +1.0 340,110 + EX31_RS18775 0.18 +0.7 340,111 - EX31_RS18775 0.18 -0.5 340,159 - EX31_RS18775 0.21 +0.1 340,159 - EX31_RS18775 0.21 +0.1 340,247 - EX31_RS18775 0.26 -0.1 340,296 + EX31_RS18775 0.29 +0.4 340,297 - EX31_RS18775 0.29 +1.0 340,297 - EX31_RS18775 0.29 -0.2 340,353 - EX31_RS18775 0.33 -0.6 340,473 - EX31_RS18775 0.40 +0.5 340,507 + EX31_RS18775 0.42 -0.6 340,507 + EX31_RS18775 0.42 -0.7 340,507 + EX31_RS18775 0.42 -0.3 340,507 + EX31_RS18775 0.42 +0.5
Or see this region's nucleotide sequence