Strain Fitness in Rahnella sp. WP5 around EX31_RS14580

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
7,995	-				-0.8
8,061	-				-0.8
8,069	-				-0.5
8,165	+				+0.5
8,168	+				-0.5
8,174	+				-0.6
8,174	+				-0.5
8,175	-				+0.3
8,175	-				+0.7
8,175	-				-0.3
8,302	+		EX31_RS14575	0.11	-0.2
8,328	+		EX31_RS14575	0.15	+0.4
8,328	+		EX31_RS14575	0.15	-1.1
8,328	+		EX31_RS14575	0.15	+1.3
8,329	-		EX31_RS14575	0.15	+0.3
8,329	-		EX31_RS14575	0.15	+0.2
8,329	-		EX31_RS14575	0.15	+0.6
8,329	-		EX31_RS14575	0.15	+0.4
8,337	+		EX31_RS14575	0.16	-0.5
8,432	-		EX31_RS14575	0.30	+0.8
8,484	+		EX31_RS14575	0.37	-0.0
8,484	+		EX31_RS14575	0.37	+1.1
8,484	+		EX31_RS14575	0.37	+0.2
8,485	-		EX31_RS14575	0.37	+0.8
8,515	-		EX31_RS14575	0.42	+1.9
8,524	+		EX31_RS14575	0.43	+0.5
8,574	+		EX31_RS14575	0.50	+0.8
8,575	-		EX31_RS14575	0.50	+0.9
8,575	-		EX31_RS14575	0.50	+0.4
8,654	-		EX31_RS14575	0.62	+1.3
8,812	+		EX31_RS14575	0.84	+0.3
8,812	+		EX31_RS14575	0.84	+1.3
8,813	-		EX31_RS14575	0.84	+1.9
8,813	-		EX31_RS14575	0.84	+0.5
8,817	+		EX31_RS14575	0.85	+1.0
8,818	-		EX31_RS14575	0.85	+1.3
8,818	-		EX31_RS14575	0.85	+0.7
8,869	-				-2.8
8,869	-				+0.7
8,869	-				+0.0
8,957	-				+0.2
8,957	-				-2.2
8,957	-				+0.3
8,957	-				-0.0
8,993	-				-0.8
8,998	+				-0.6
8,998	+				+0.9
8,999	-				+0.3
8,999	-				-0.6
8,999	-				-0.2
8,999	-				-0.7
8,999	-				-1.4
10,498	-				+0.8
10,499	+				+0.0
10,499	+				+0.2
10,499	+				+0.1
10,499	+				+0.5
10,499	+				-0.3
10,500	-				-0.1
10,500	-				-1.3
10,500	-				-0.1
10,500	-				+0.5
10,500	-				-0.8
10,500	-				+0.1
10,500	-				+0.6
10,500	-				-0.2
10,500	-				-0.3
10,554	+				-0.4
10,555	-				+0.4
10,563	+				+0.0
10,564	-				-0.7
10,569	+				-0.4
10,569	+				+0.4
10,569	+				-0.5
10,569	+				-0.5
10,569	+				-0.4
10,569	+				+0.4
10,569	+				-0.4
10,573	+				+0.1
10,573	+				+0.0
10,573	+				-1.5
10,573	+				-0.2
10,574	-				-2.1
10,574	-				-0.7
10,597	+				-0.5
10,597	+				+0.3
10,597	+				+0.2
10,597	+				+0.4
10,598	-				-1.2
10,598	-				-0.2
10,598	-				-0.4
10,598	-				+0.3
10,598	-				+0.9
10,600	-				-0.5
10,616	-				-0.3
10,641	+				-0.5
10,641	+				+0.3
10,641	+				+0.2
10,642	-				-0.2
10,644	-				+0.0
10,668	+				+0.6
10,668	+				-0.5
10,698	+				-0.4
10,740	+		EX31_RS14585	0.11	-0.3
10,741	-		EX31_RS14585	0.12	-0.2
10,766	+		EX31_RS14585	0.15	-0.4
10,882	-		EX31_RS14585	0.31	+0.5
10,891	+		EX31_RS14585	0.32	+0.8
10,892	-		EX31_RS14585	0.32	+0.3
10,892	-		EX31_RS14585	0.32	+0.6
10,907	+		EX31_RS14585	0.34	-0.6
10,908	-		EX31_RS14585	0.35	+0.0
10,908	-		EX31_RS14585	0.35	-0.6
10,908	-		EX31_RS14585	0.35	+0.2
10,908	-		EX31_RS14585	0.35	+0.8
10,908	-		EX31_RS14585	0.35	-0.4
10,974	+		EX31_RS14585	0.44	-0.0
10,974	+		EX31_RS14585	0.44	+0.6
10,974	+		EX31_RS14585	0.44	+0.2
10,974	+		EX31_RS14585	0.44	-0.5
10,974	+		EX31_RS14585	0.44	+0.6
10,975	-		EX31_RS14585	0.44	-0.3
10,975	-		EX31_RS14585	0.44	-0.9
10,975	-		EX31_RS14585	0.44	-1.0
10,975	-		EX31_RS14585	0.44	+0.3
11,010	+		EX31_RS14585	0.49	-0.3
11,010	+		EX31_RS14585	0.49	+0.1
11,010	+		EX31_RS14585	0.49	-0.1
11,010	+		EX31_RS14585	0.49	+0.2
11,010	+		EX31_RS14585	0.49	-0.1
11,010	+		EX31_RS14585	0.49	-0.5
11,010	+		EX31_RS14585	0.49	-1.7
11,011	-		EX31_RS14585	0.49	+0.1
11,011	-		EX31_RS14585	0.49	-0.2
11,011	-		EX31_RS14585	0.49	-0.4
11,011	-		EX31_RS14585	0.49	-0.2
11,011	-		EX31_RS14585	0.49	-0.0
11,011	-		EX31_RS14585	0.49	-0.8
11,011	-		EX31_RS14585	0.49	-1.1
11,033	+		EX31_RS14585	0.52	-0.5
11,033	+		EX31_RS14585	0.52	-0.0
11,033	+		EX31_RS14585	0.52	+0.1
11,033	+		EX31_RS14585	0.52	+0.2
11,033	+		EX31_RS14585	0.52	-0.1
11,033	+		EX31_RS14585	0.52	-0.1
11,034	-		EX31_RS14585	0.52	-0.2
11,034	-		EX31_RS14585	0.52	+1.0
11,082	+		EX31_RS14585	0.59	-1.2
11,082	+		EX31_RS14585	0.59	-0.0
11,083	-		EX31_RS14585	0.59	-0.2
11,083	-		EX31_RS14585	0.59	-0.6
11,083	-		EX31_RS14585	0.59	+0.3
11,083	-		EX31_RS14585	0.59	-0.6
11,083	-		EX31_RS14585	0.59	-0.2
11,083	-		EX31_RS14585	0.59	-0.3
11,083	-		EX31_RS14585	0.59	+0.2
11,083	-		EX31_RS14585	0.59	+0.3
11,083	-		EX31_RS14585	0.59	+0.4
11,115	+		EX31_RS14585	0.63	-0.6
11,115	+		EX31_RS14585	0.63	+0.4
11,116	-		EX31_RS14585	0.63	+0.8
11,154	+		EX31_RS14585	0.68	+0.0
11,155	-		EX31_RS14585	0.69	-1.2
11,184	+		EX31_RS14585	0.73	+0.2
11,184	+		EX31_RS14585	0.73	-0.2
11,184	+		EX31_RS14585	0.73	+0.2
11,185	-		EX31_RS14585	0.73	-0.7
11,187	+		EX31_RS14585	0.73	-0.0
11,187	+		EX31_RS14585	0.73	+0.1
11,187	+		EX31_RS14585	0.73	-0.2
11,188	-		EX31_RS14585	0.73	-0.4
11,188	-		EX31_RS14585	0.73	+0.0
11,208	+		EX31_RS14585	0.76	-0.1
11,208	+		EX31_RS14585	0.76	+0.4
11,208	+		EX31_RS14585	0.76	-0.4
11,208	+		EX31_RS14585	0.76	+0.5
11,209	-		EX31_RS14585	0.76	-0.3
11,209	-		EX31_RS14585	0.76	+0.1
11,237	+		EX31_RS14585	0.80	+0.1
11,237	+		EX31_RS14585	0.80	+0.5
11,237	+		EX31_RS14585	0.80	+0.6
11,237	+		EX31_RS14585	0.80	-0.5
11,238	-		EX31_RS14585	0.80	-0.0
11,238	-		EX31_RS14585	0.80	-0.1
11,238	-		EX31_RS14585	0.80	-0.0
11,238	-		EX31_RS14585	0.80	-0.3
11,283	+		EX31_RS14585	0.86	-0.2
11,283	+		EX31_RS14585	0.86	-0.7
11,283	+		EX31_RS14585	0.86	-0.0
11,283	+		EX31_RS14585	0.86	-0.2
11,284	-		EX31_RS14585	0.86	+0.5
11,284	-		EX31_RS14585	0.86	+0.0
11,285	-		EX31_RS14585	0.87	-0.5
11,301	+		EX31_RS14585	0.89	-0.0
11,333	-				-0.7
11,369	-				-0.3
11,402	+				+0.9
11,403	-				-1.3
11,408	+				+0.1
11,408	+				+0.2
11,408	+				-0.0
11,408	+				-0.7
11,408	+				-0.2
11,409	-				-0.4
11,409	-				-0.1
11,409	-				-0.8
11,411	+				+0.9
11,411	+				-0.1
11,412	-				+0.4
11,412	-				-0.7
11,412	-				+1.0
11,412	-				-0.6
11,442	-				-0.2
11,444	+				-0.4
11,444	+				+0.1
11,445	-				+1.2
11,445	-				+1.1
11,445	-				+0.7