Strain Fitness in Rahnella sp. WP5 around EX31_RS05095

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
151,447	+		EX31_RS05090	0.15	-0.3
151,447	+		EX31_RS05090	0.15	+0.1
151,447	+		EX31_RS05090	0.15	+0.2
151,448	-		EX31_RS05090	0.16	-0.0
151,472	+		EX31_RS05090	0.19	+1.5
151,472	+		EX31_RS05090	0.19	-1.0
151,473	-		EX31_RS05090	0.19	-0.5
151,473	-		EX31_RS05090	0.19	-0.2
151,512	+		EX31_RS05090	0.25	+0.0
151,513	-		EX31_RS05090	0.25	+0.3
151,513	-		EX31_RS05090	0.25	-0.0
151,607	+		EX31_RS05090	0.38	-0.6
151,706	-		EX31_RS05090	0.53	+0.6
151,725	+		EX31_RS05090	0.55	+0.3
151,725	+		EX31_RS05090	0.55	-0.8
151,725	+		EX31_RS05090	0.55	-1.6
151,725	+		EX31_RS05090	0.55	-0.8
151,726	-		EX31_RS05090	0.55	-0.3
151,726	-		EX31_RS05090	0.55	+0.7
151,726	-		EX31_RS05090	0.55	+0.2
151,726	-		EX31_RS05090	0.55	-0.1
151,726	-		EX31_RS05090	0.55	+0.7
151,760	-		EX31_RS05090	0.60	-0.3
151,760	-		EX31_RS05090	0.60	+0.3
151,760	-		EX31_RS05090	0.60	-1.1
151,760	-		EX31_RS05090	0.60	-0.1
151,760	-		EX31_RS05090	0.60	+0.1
151,836	+		EX31_RS05090	0.71	-0.3
151,836	+		EX31_RS05090	0.71	+0.2
151,836	+		EX31_RS05090	0.71	-0.5
151,836	+		EX31_RS05090	0.71	+0.2
151,836	+		EX31_RS05090	0.71	+0.0
151,836	+		EX31_RS05090	0.71	-0.1
151,836	+		EX31_RS05090	0.71	-0.2
151,836	+		EX31_RS05090	0.71	-1.3
151,836	+		EX31_RS05090	0.71	-0.1
151,836	+		EX31_RS05090	0.71	-0.6
151,836	+		EX31_RS05090	0.71	+0.4
151,837	-		EX31_RS05090	0.71	+0.1
151,837	-		EX31_RS05090	0.71	+0.7
151,837	-		EX31_RS05090	0.71	-0.5
151,837	-		EX31_RS05090	0.71	+0.1
151,837	-		EX31_RS05090	0.71	+0.4
151,837	-		EX31_RS05090	0.71	-0.2
151,837	-		EX31_RS05090	0.71	-0.6
151,837	-		EX31_RS05090	0.71	+0.7
151,837	-		EX31_RS05090	0.71	+0.1
151,837	-		EX31_RS05090	0.71	-0.1
151,837	-		EX31_RS05090	0.71	+0.3
151,837	-		EX31_RS05090	0.71	+0.4
151,837	-		EX31_RS05090	0.71	-0.1
151,837	-		EX31_RS05090	0.71	+0.1
151,837	-		EX31_RS05090	0.71	-0.1
151,858	+		EX31_RS05090	0.74	-1.0
151,947	+		EX31_RS05090	0.87	-0.6
151,948	-		EX31_RS05090	0.87	-0.8
151,948	-		EX31_RS05090	0.87	-0.1
151,948	-		EX31_RS05090	0.87	-0.8
151,948	-		EX31_RS05090	0.87	-0.7
151,948	-		EX31_RS05090	0.87	+0.0
152,024	+				-1.7
152,029	-				+0.7
152,029	-				-0.3
152,067	-				-0.2
152,067	-				+0.2
152,067	-				+0.2
152,171	+				-0.3
152,171	+				-0.3
152,171	+				+0.2
152,171	+				-0.1
152,185	-				+0.3
152,195	+				-0.0
152,195	+				-1.6
152,195	+				-0.3
152,195	+				+0.6
152,195	+				-0.1
152,195	+				-0.8
152,196	-				-0.1
152,196	-				+0.1
152,196	-				-0.5
152,196	-				-0.3
152,199	+				-0.2
152,200	-				+0.3
152,209	+				-0.5
152,209	+				+0.1
152,209	+				-0.6
152,210	-				+0.8
152,214	+				+0.6
152,214	+				-0.9
152,215	-				-0.0
152,215	-				-0.1
152,234	+				-0.6
152,235	-				+0.5
152,239	+				+0.0
152,240	-				-0.9
152,240	-				+0.1
152,244	+				+0.4
152,244	+				-0.8
152,244	+				-0.4
152,245	-				-1.0
152,245	-				-0.2
152,269	+				+0.3
152,269	+				-0.4
152,269	+				+1.4
152,316	+				-0.9
152,316	+				+0.4
152,316	+				-0.1
152,316	+				-0.9
152,316	+				+0.6
152,317	-				+1.1
152,317	-				+0.3
152,317	-				+1.1
152,331	+				-0.2
152,336	-				-0.7
152,336	-				-0.5
152,351	-				+0.0
152,351	-				-0.4
152,391	+				+0.1
152,444	+				+0.1
152,444	+				-1.1
152,444	+				-0.4
152,444	+				+0.6
152,444	+				+0.5
152,444	+				-1.6
152,444	+				+0.4
152,444	+				-1.2
152,444	+				-1.7
152,444	+				-0.1
152,444	+				-0.1
152,444	+				+0.0
152,444	+				-0.1
152,444	+				+0.8
152,444	+				-0.1
152,445	-				-0.3
152,445	-				-0.0
152,445	-				+0.0
152,445	-				-0.5
152,445	-				+0.1
152,445	-				-0.6
152,445	-				-0.2
152,445	-				-0.9
152,477	+				-0.4
152,562	+		EX31_RS05095	0.14	-1.7
152,562	+		EX31_RS05095	0.14	-0.3
152,563	-		EX31_RS05095	0.14	-0.2
152,566	+		EX31_RS05095	0.14	-0.1
152,566	+		EX31_RS05095	0.14	+0.3
152,567	-		EX31_RS05095	0.14	-0.6
152,567	-		EX31_RS05095	0.14	+0.5
152,567	-		EX31_RS05095	0.14	-0.0
152,567	-		EX31_RS05095	0.14	-0.3
152,598	+		EX31_RS05095	0.15	+0.4
152,598	+		EX31_RS05095	0.15	+0.6
152,598	+		EX31_RS05095	0.15	+0.4
152,598	+		EX31_RS05095	0.15	-0.3
152,598	+		EX31_RS05095	0.15	-2.0
152,598	+		EX31_RS05095	0.15	-0.5
152,598	+		EX31_RS05095	0.15	-0.2
152,599	-		EX31_RS05095	0.16	-1.3
152,599	-		EX31_RS05095	0.16	-0.1
152,599	-		EX31_RS05095	0.16	+0.3
152,599	-		EX31_RS05095	0.16	-0.2
152,599	-		EX31_RS05095	0.16	-0.6
152,599	-		EX31_RS05095	0.16	-0.5
152,602	+		EX31_RS05095	0.16	-0.4
152,603	-		EX31_RS05095	0.16	-0.9
152,603	-		EX31_RS05095	0.16	+0.2
152,603	-		EX31_RS05095	0.16	+0.6
152,677	+		EX31_RS05095	0.19	-0.6
152,677	+		EX31_RS05095	0.19	+0.1
152,677	+		EX31_RS05095	0.19	-1.2
152,677	+		EX31_RS05095	0.19	-1.3
152,677	+		EX31_RS05095	0.19	-0.2
152,677	+		EX31_RS05095	0.19	-1.2
152,677	+		EX31_RS05095	0.19	-0.4
152,677	+		EX31_RS05095	0.19	+0.3
152,677	+		EX31_RS05095	0.19	-0.6
152,677	+		EX31_RS05095	0.19	-2.5
152,678	-		EX31_RS05095	0.19	+0.1
152,678	-		EX31_RS05095	0.19	+1.3
152,678	-		EX31_RS05095	0.19	-0.0
152,678	-		EX31_RS05095	0.19	-0.8
152,678	-		EX31_RS05095	0.19	-0.4
152,711	-		EX31_RS05095	0.21	-1.2
152,791	+		EX31_RS05095	0.25	+0.6
152,792	-		EX31_RS05095	0.25	-0.3
152,792	-		EX31_RS05095	0.25	+0.1
152,795	+		EX31_RS05095	0.25	-0.1
152,795	+		EX31_RS05095	0.25	-0.0
152,795	+		EX31_RS05095	0.25	-0.1
152,796	-		EX31_RS05095	0.25	-0.8
152,826	+		EX31_RS05095	0.26	-0.4
152,827	-		EX31_RS05095	0.26	+0.2
152,827	-		EX31_RS05095	0.26	-0.3
152,847	+		EX31_RS05095	0.27	+0.8
152,848	-		EX31_RS05095	0.27	-0.5
152,910	+		EX31_RS05095	0.30	-0.0
152,910	+		EX31_RS05095	0.30	-0.1
152,910	+		EX31_RS05095	0.30	-1.2
152,910	+		EX31_RS05095	0.30	+0.1
152,910	+		EX31_RS05095	0.30	-1.4
152,910	+		EX31_RS05095	0.30	+0.0
152,910	+		EX31_RS05095	0.30	-0.1
152,910	+		EX31_RS05095	0.30	-1.4
152,910	+		EX31_RS05095	0.30	-1.4
152,910	+		EX31_RS05095	0.30	+0.4
152,910	+		EX31_RS05095	0.30	+0.3
152,910	+		EX31_RS05095	0.30	+0.4
152,910	+		EX31_RS05095	0.30	-1.0
152,910	+		EX31_RS05095	0.30	+0.3
152,910	+		EX31_RS05095	0.30	-0.5
152,910	+		EX31_RS05095	0.30	-0.8
152,910	+		EX31_RS05095	0.30	+0.1
152,910	+		EX31_RS05095	0.30	-0.4
152,911	-		EX31_RS05095	0.30	-0.2
152,911	-		EX31_RS05095	0.30	+0.0
152,911	-		EX31_RS05095	0.30	+0.9
152,911	-		EX31_RS05095	0.30	-2.7
152,911	-		EX31_RS05095	0.30	-0.2
152,911	-		EX31_RS05095	0.30	+0.8
152,911	-		EX31_RS05095	0.30	-0.2
152,911	-		EX31_RS05095	0.30	-1.2
152,911	-		EX31_RS05095	0.30	+0.0
152,911	-		EX31_RS05095	0.30	-1.1
152,911	-		EX31_RS05095	0.30	-0.4
152,911	-		EX31_RS05095	0.30	+0.2
152,911	-		EX31_RS05095	0.30	+0.5
152,911	-		EX31_RS05095	0.30	+0.2
152,912	+		EX31_RS05095	0.30	-0.5
152,912	+		EX31_RS05095	0.30	+0.5
152,912	+		EX31_RS05095	0.30	+0.0
152,913	-		EX31_RS05095	0.31	+0.4
152,913	-		EX31_RS05095	0.31	+0.1
152,913	-		EX31_RS05095	0.31	-0.4
152,913	-		EX31_RS05095	0.31	+0.3
152,930	+		EX31_RS05095	0.31	+0.2
152,930	+		EX31_RS05095	0.31	-0.1
152,930	+		EX31_RS05095	0.31	-0.8
152,930	+		EX31_RS05095	0.31	-0.8
152,931	-		EX31_RS05095	0.31	-0.1
152,931	-		EX31_RS05095	0.31	-0.7
152,976	+		EX31_RS05095	0.34	-0.0
152,976	+		EX31_RS05095	0.34	-0.3
152,976	+		EX31_RS05095	0.34	+0.2
152,977	-		EX31_RS05095	0.34	-0.1
152,977	-		EX31_RS05095	0.34	-0.1
153,002	+		EX31_RS05095	0.35	+0.0
153,003	-		EX31_RS05095	0.35	-0.7
153,003	-		EX31_RS05095	0.35	+0.3
153,003	-		EX31_RS05095	0.35	+0.1
153,003	-		EX31_RS05095	0.35	-0.5
153,003	-		EX31_RS05095	0.35	-0.2
153,003	-		EX31_RS05095	0.35	+0.7
153,003	-		EX31_RS05095	0.35	+0.4
153,019	+		EX31_RS05095	0.36	+0.7
153,020	-		EX31_RS05095	0.36	-0.3
153,032	+		EX31_RS05095	0.36	+0.0
153,033	-		EX31_RS05095	0.36	-0.5
153,033	-		EX31_RS05095	0.36	-1.2
153,033	-		EX31_RS05095	0.36	-0.3
153,033	-		EX31_RS05095	0.36	+0.6
153,033	-		EX31_RS05095	0.36	+0.6
153,107	-		EX31_RS05095	0.40	-0.6
153,122	+		EX31_RS05095	0.40	-0.4
153,122	+		EX31_RS05095	0.40	-0.6
153,122	+		EX31_RS05095	0.40	+0.0
153,122	+		EX31_RS05095	0.40	-0.7
153,122	+		EX31_RS05095	0.40	-0.6
153,122	+		EX31_RS05095	0.40	-0.1
153,122	+		EX31_RS05095	0.40	+0.0
153,122	+		EX31_RS05095	0.40	-0.6
153,122	+		EX31_RS05095	0.40	-0.0
153,122	+		EX31_RS05095	0.40	+0.5
153,123	-		EX31_RS05095	0.41	-0.6
153,123	-		EX31_RS05095	0.41	-0.7
153,123	-		EX31_RS05095	0.41	+0.5
153,123	-		EX31_RS05095	0.41	-1.0
153,123	-		EX31_RS05095	0.41	+0.6
153,123	-		EX31_RS05095	0.41	+0.6
153,123	-		EX31_RS05095	0.41	-0.2
153,123	-		EX31_RS05095	0.41	+0.4
153,123	-		EX31_RS05095	0.41	-1.4
153,123	-		EX31_RS05095	0.41	-1.2
153,148	+		EX31_RS05095	0.42	-0.1
153,149	-		EX31_RS05095	0.42	-0.1
153,149	-		EX31_RS05095	0.42	+0.3
153,177	-		EX31_RS05095	0.43	-2.2
153,177	-		EX31_RS05095	0.43	+0.3
153,185	+		EX31_RS05095	0.43	+0.4
153,185	+		EX31_RS05095	0.43	-0.4
153,186	-		EX31_RS05095	0.44	-0.5
153,186	-		EX31_RS05095	0.44	+0.4
153,284	-		EX31_RS05095	0.48	-0.4
153,317	+		EX31_RS05095	0.50	-0.2
153,317	+		EX31_RS05095	0.50	-0.0
153,345	-		EX31_RS05095	0.51	+0.7
153,356	-		EX31_RS05095	0.52	-0.9
153,356	-		EX31_RS05095	0.52	-0.7
153,364	+		EX31_RS05095	0.52	-0.4
153,364	+		EX31_RS05095	0.52	+0.2
153,477	-		EX31_RS05095	0.57	+0.1
153,477	-		EX31_RS05095	0.57	-0.2
153,477	-		EX31_RS05095	0.57	-0.1
153,496	+		EX31_RS05095	0.58	-0.4
153,562	+		EX31_RS05095	0.61	+0.1
153,562	+		EX31_RS05095	0.61	-0.2
153,562	+		EX31_RS05095	0.61	-0.6
153,562	+		EX31_RS05095	0.61	-0.0
153,562	+		EX31_RS05095	0.61	-1.2
153,562	+		EX31_RS05095	0.61	+0.2
153,562	+		EX31_RS05095	0.61	-0.9
153,562	+		EX31_RS05095	0.61	-0.6
153,562	+		EX31_RS05095	0.61	-0.4
153,562	+		EX31_RS05095	0.61	-1.3
153,562	+		EX31_RS05095	0.61	+0.1
153,563	-		EX31_RS05095	0.62	-0.6
153,563	-		EX31_RS05095	0.62	+0.3
153,563	-		EX31_RS05095	0.62	+0.4
153,563	-		EX31_RS05095	0.62	-0.9
153,563	-		EX31_RS05095	0.62	-1.8
153,563	-		EX31_RS05095	0.62	-0.9
153,563	-		EX31_RS05095	0.62	+0.1
153,563	-		EX31_RS05095	0.62	-0.3
153,563	-		EX31_RS05095	0.62	-0.4
153,563	-		EX31_RS05095	0.62	-0.1
153,563	-		EX31_RS05095	0.62	+0.5
153,563	-		EX31_RS05095	0.62	+0.3
153,563	-		EX31_RS05095	0.62	-2.5
153,563	-		EX31_RS05095	0.62	-0.7
153,563	-		EX31_RS05095	0.62	-0.0
153,563	-		EX31_RS05095	0.62	+0.3
153,563	-		EX31_RS05095	0.62	-0.3
153,589	+		EX31_RS05095	0.63	+0.4
153,589	+		EX31_RS05095	0.63	-0.4
153,589	+		EX31_RS05095	0.63	+0.4
153,589	+		EX31_RS05095	0.63	+0.6
153,590	-		EX31_RS05095	0.63	-0.0
153,590	-		EX31_RS05095	0.63	-0.4
153,590	-		EX31_RS05095	0.63	-0.8
153,590	-		EX31_RS05095	0.63	+0.5
153,664	+		EX31_RS05095	0.66	-0.3
153,665	-		EX31_RS05095	0.66	+0.0
153,665	-		EX31_RS05095	0.66	+0.8
153,675	+		EX31_RS05095	0.67	-1.8
153,739	-		EX31_RS05095	0.70	-0.7
153,760	+		EX31_RS05095	0.71	-0.8
153,774	+		EX31_RS05095	0.72	-0.6
153,795	+		EX31_RS05095	0.73	-0.0
153,795	+		EX31_RS05095	0.73	-0.6
153,796	-		EX31_RS05095	0.73	+0.9
153,850	+		EX31_RS05095	0.75	-0.4
153,889	+		EX31_RS05095	0.77	+0.6
153,890	-		EX31_RS05095	0.77	+0.3
153,908	+		EX31_RS05095	0.78	-0.5
153,958	-		EX31_RS05095	0.80	+0.0
153,961	+		EX31_RS05095	0.80	+0.6
153,961	+		EX31_RS05095	0.80	-0.8
153,962	-		EX31_RS05095	0.81	-0.0
154,013	-		EX31_RS05095	0.83	-0.6
154,013	-		EX31_RS05095	0.83	-0.3
154,018	-		EX31_RS05095	0.83	-0.2
154,049	-		EX31_RS05095	0.85	-0.4
154,132	-		EX31_RS05095	0.89	-1.3
154,174	+				+0.6
154,174	+				-1.5
154,174	+				-0.0
154,174	+				-1.2
154,174	+				-0.2
154,175	-				-0.6
154,184	-				-0.7
154,184	-				-0.2
154,195	+				+0.5
154,195	+				+0.2
154,195	+				+0.0
154,196	-				-0.1
154,196	-				+0.1
154,196	-				+0.6
154,196	-				-0.3
154,202	+				-0.4
154,235	-				-0.3
154,253	-				-0.3
154,253	-				+0.6
154,294	+				-0.7
154,294	+				+1.3
154,302	+				+0.1
154,302	+				+1.3
154,302	+				-0.1
154,303	-				-0.2
154,343	-				-0.9
154,365	+				-0.1
154,365	+				-1.3
154,365	+				-0.1
154,365	+				+0.4
154,365	+				-0.8
154,366	-				-0.2
154,367	+				+0.8
154,367	+				+0.2
154,367	+				+0.3
154,368	-				+0.7
154,368	-				+0.2
154,399	-				+1.0
154,399	-				+0.2
154,432	+				+0.0
154,451	+				+0.2
154,451	+				+0.2
154,456	+				+0.1
154,456	+				+0.1
154,456	+				-0.3
154,456	+				+0.7
154,457	-				-1.1
154,457	-				-0.6
154,457	-				-1.3
154,457	-				-0.8
154,457	-				-0.9
154,469	+				-0.1
154,469	+				+0.2
154,469	+				+0.5
154,470	-				+0.4
154,470	-				-0.4
154,470	-				+0.5
154,470	-				-0.3
154,488	+				+0.2
154,488	+				+0.2
154,522	-				-0.5
154,687	+		EX31_RS05100	0.15	-0.3
154,687	+		EX31_RS05100	0.15	-0.6
154,688	-		EX31_RS05100	0.15	-0.0
154,925	+		EX31_RS05100	0.28	+0.1
154,926	-		EX31_RS05100	0.28	+0.1
154,972	-		EX31_RS05100	0.30	-0.9
154,972	-		EX31_RS05100	0.30	+0.2
154,972	-		EX31_RS05100	0.30	-0.6
155,074	-		EX31_RS05100	0.36	+0.4
155,076	+		EX31_RS05100	0.36	-0.4
155,076	+		EX31_RS05100	0.36	-0.1
155,076	+		EX31_RS05100	0.36	-0.0
155,076	+		EX31_RS05100	0.36	+0.2
155,076	+		EX31_RS05100	0.36	-0.8
155,076	+		EX31_RS05100	0.36	+0.5
155,076	+		EX31_RS05100	0.36	-1.2
155,077	-		EX31_RS05100	0.36	+0.0
155,077	-		EX31_RS05100	0.36	-0.4
155,077	-		EX31_RS05100	0.36	-0.0
155,077	-		EX31_RS05100	0.36	-0.9
155,077	-		EX31_RS05100	0.36	-0.6
155,077	-		EX31_RS05100	0.36	-0.4
155,077	-		EX31_RS05100	0.36	-1.4
155,077	-		EX31_RS05100	0.36	-0.6
155,077	-		EX31_RS05100	0.36	+0.2
155,077	-		EX31_RS05100	0.36	-0.3
155,156	+		EX31_RS05100	0.40	-0.1
155,156	+		EX31_RS05100	0.40	+0.2
155,157	-		EX31_RS05100	0.40	+0.5
155,157	-		EX31_RS05100	0.40	+0.9
155,226	+		EX31_RS05100	0.44	+0.6
155,226	+		EX31_RS05100	0.44	+0.5
155,227	-		EX31_RS05100	0.44	-0.7
155,227	-		EX31_RS05100	0.44	-0.2
155,227	-		EX31_RS05100	0.44	-0.6
155,291	+		EX31_RS05100	0.47	+0.9
155,291	+		EX31_RS05100	0.47	-0.5
155,324	+		EX31_RS05100	0.49	-1.7
155,324	+		EX31_RS05100	0.49	+0.2
155,325	-		EX31_RS05100	0.49	-0.6