Strain Fitness in Rahnella sp. WP5 around EX31_RS13270

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
81,269	-		EX31_RS13265	0.51	-0.1
81,281	-		EX31_RS13265	0.52	-0.1
81,281	-		EX31_RS13265	0.52	+0.2
81,286	+		EX31_RS13265	0.52	+1.4
81,286	+		EX31_RS13265	0.52	+0.4
81,286	+		EX31_RS13265	0.52	-0.9
81,286	+		EX31_RS13265	0.52	+0.1
81,286	+		EX31_RS13265	0.52	+1.6
81,286	+		EX31_RS13265	0.52	-0.5
81,286	+		EX31_RS13265	0.52	-0.8
81,286	+		EX31_RS13265	0.52	-1.1
81,286	+		EX31_RS13265	0.52	-0.3
81,286	+		EX31_RS13265	0.52	-0.5
81,286	+		EX31_RS13265	0.52	-1.1
81,286	+		EX31_RS13265	0.52	-1.4
81,286	+		EX31_RS13265	0.52	-0.2
81,286	+		EX31_RS13265	0.52	-0.0
81,286	+		EX31_RS13265	0.52	+0.8
81,286	+		EX31_RS13265	0.52	-1.6
81,287	-		EX31_RS13265	0.52	-0.3
81,287	-		EX31_RS13265	0.52	-0.2
81,287	-		EX31_RS13265	0.52	+0.7
81,287	-		EX31_RS13265	0.52	+0.1
81,287	-		EX31_RS13265	0.52	-0.3
81,287	-		EX31_RS13265	0.52	+0.5
81,287	-		EX31_RS13265	0.52	+0.6
81,287	-		EX31_RS13265	0.52	+0.1
81,287	-		EX31_RS13265	0.52	+0.2
81,287	-		EX31_RS13265	0.52	+0.8
81,287	-		EX31_RS13265	0.52	-0.0
81,287	-		EX31_RS13265	0.52	-0.1
81,287	-		EX31_RS13265	0.52	-0.7
81,287	-		EX31_RS13265	0.52	+0.2
81,287	-		EX31_RS13265	0.52	+0.4
81,287	-		EX31_RS13265	0.52	-0.5
81,287	-		EX31_RS13265	0.52	-0.4
81,287	-		EX31_RS13265	0.52	-0.4
81,287	-		EX31_RS13265	0.52	-0.8
81,309	+		EX31_RS13265	0.54	-0.1
81,309	+		EX31_RS13265	0.54	-0.3
81,309	+		EX31_RS13265	0.54	-1.7
81,310	-		EX31_RS13265	0.54	+0.7
81,341	+		EX31_RS13265	0.56	+0.6
81,357	+		EX31_RS13265	0.57	+0.8
81,408	+		EX31_RS13265	0.61	+0.3
81,409	-		EX31_RS13265	0.61	+0.2
81,410	+		EX31_RS13265	0.61	-0.3
81,410	+		EX31_RS13265	0.61	-0.9
81,411	-		EX31_RS13265	0.61	-1.7
81,442	+		EX31_RS13265	0.64	+0.1
81,442	+		EX31_RS13265	0.64	+0.8
81,443	-		EX31_RS13265	0.64	-0.5
81,467	+		EX31_RS13265	0.66	+0.5
81,467	+		EX31_RS13265	0.66	-1.0
81,467	+		EX31_RS13265	0.66	-0.2
81,468	-		EX31_RS13265	0.66	-0.8
81,468	-		EX31_RS13265	0.66	+0.3
81,491	+		EX31_RS13265	0.67	-0.4
81,491	+		EX31_RS13265	0.67	-0.1
81,554	+		EX31_RS13265	0.72	-0.3
81,555	-		EX31_RS13265	0.72	+0.0
81,613	-		EX31_RS13265	0.76	-0.1
81,655	-		EX31_RS13265	0.80	-0.4
81,695	-		EX31_RS13265	0.83	+0.6
81,698	+		EX31_RS13265	0.83	-1.2
81,698	+		EX31_RS13265	0.83	-0.1
81,698	+		EX31_RS13265	0.83	+0.7
81,698	+		EX31_RS13265	0.83	-0.1
81,698	+		EX31_RS13265	0.83	-0.3
81,698	+		EX31_RS13265	0.83	-0.9
81,698	+		EX31_RS13265	0.83	+0.3
81,699	-		EX31_RS13265	0.83	+1.3
81,699	-		EX31_RS13265	0.83	-0.2
81,699	-		EX31_RS13265	0.83	-0.4
81,699	-		EX31_RS13265	0.83	+0.4
81,699	-		EX31_RS13265	0.83	-0.1
81,699	-		EX31_RS13265	0.83	+0.2
81,699	-		EX31_RS13265	0.83	-0.4
81,701	+		EX31_RS13265	0.83	+0.1
81,702	-		EX31_RS13265	0.83	+0.8
81,782	+		EX31_RS13265	0.89	-0.4
81,782	+		EX31_RS13265	0.89	+1.2
81,783	-		EX31_RS13265	0.89	+0.4
81,783	-		EX31_RS13265	0.89	+0.5
81,783	-		EX31_RS13265	0.89	+0.4
81,783	-		EX31_RS13265	0.89	-0.1
81,792	+		EX31_RS13265	0.90	-0.2
81,793	-		EX31_RS13265	0.90	-0.0
81,815	+				-0.8
81,816	-				-0.1
81,836	+				-0.1
81,836	+				-0.1
81,837	-				+0.3
81,837	-				-0.5
81,849	-				-0.1
81,849	-				-0.2
81,849	-				-0.4
81,851	+				+0.1
81,851	+				-0.7
81,872	+				+0.1
81,872	+				-0.1
81,873	-				-1.7
81,873	-				+0.2
81,873	-				-0.5
81,954	+				-1.6
81,954	+				+0.4
81,954	+				-1.1
81,956	+				+0.7
81,957	-				+0.1
81,989	+				+0.8
81,989	+				-0.0
81,990	-				+0.7
81,990	-				+0.0
81,992	-				+0.1
82,005	+				+0.4
82,006	-				-0.2
82,016	+				-0.5
82,044	+				-0.1
82,064	-				+0.7
82,118	-				-0.0
82,118	-				-0.7
82,241	+		EX31_RS13270	0.11	+0.4
82,241	+		EX31_RS13270	0.11	-0.3
82,269	+		EX31_RS13270	0.19	+0.1
82,270	-		EX31_RS13270	0.20	+0.1
82,270	-		EX31_RS13270	0.20	-1.2
82,299	+		EX31_RS13270	0.29	-0.9
82,300	-		EX31_RS13270	0.29	-1.6
82,370	+		EX31_RS13270	0.51	-0.5
82,518	+				+0.6
82,518	+				+0.2
82,523	-				+1.1
82,561	+				+0.4
82,565	-				+0.3
82,565	-				+0.8
82,565	-				+0.5
82,595	+				+0.2
82,596	-				-0.2
82,690	+				-0.3
82,691	-				+0.6
82,691	-				+0.4
82,708	-				-0.3
82,708	-				+0.7
82,708	-				+0.5
82,765	-				+0.2
82,765	-				+0.7
82,765	-				+0.9
82,765	-				-0.1
82,765	-				+0.3
82,793	-				+1.1
82,793	-				-0.1
82,793	-				-0.8
82,816	+		EX31_RS13275	0.10	-0.7
82,844	-		EX31_RS13275	0.12	+0.6
82,858	-		EX31_RS13275	0.13	-0.2
82,904	+		EX31_RS13275	0.17	-0.5
83,001	-		EX31_RS13275	0.25	+0.2
83,001	-		EX31_RS13275	0.25	+0.3
83,001	-		EX31_RS13275	0.25	+0.4
83,001	-		EX31_RS13275	0.25	-0.3
83,001	-		EX31_RS13275	0.25	+0.4
83,009	-		EX31_RS13275	0.25	+0.7
83,009	-		EX31_RS13275	0.25	+0.4
83,009	-		EX31_RS13275	0.25	-0.4
83,009	-		EX31_RS13275	0.25	+0.5
83,009	-		EX31_RS13275	0.25	+0.0
83,018	-		EX31_RS13275	0.26	-0.3
83,018	-		EX31_RS13275	0.26	+0.0
83,018	-		EX31_RS13275	0.26	+0.7
83,018	-		EX31_RS13275	0.26	-0.1
83,043	-		EX31_RS13275	0.28	+0.4
83,043	-		EX31_RS13275	0.28	+0.5
83,219	-		EX31_RS13275	0.42	-0.7
83,219	-		EX31_RS13275	0.42	+0.3
83,357	-		EX31_RS13275	0.53	+0.2
83,357	-		EX31_RS13275	0.53	+0.4
83,357	-		EX31_RS13275	0.53	+0.5
83,382	-		EX31_RS13275	0.55	+0.8
83,382	-		EX31_RS13275	0.55	+1.2
83,481	-		EX31_RS13275	0.63	+0.6
83,481	-		EX31_RS13275	0.63	-0.1