Strain Fitness in Rahnella sp. WP5 around EX31_RS17045

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
849	-		EX31_RS26065	0.44	+0.5
849	-		EX31_RS26065	0.44	-0.7
897	+		EX31_RS26065	0.89	-0.2
897	+		EX31_RS26065	0.89	-1.4
897	+		EX31_RS26065	0.89	-0.3
898	-				-0.4
898	-				-0.1
898	-				+0.5
898	-				-0.1
908	+				-0.7
909	-				+0.4
909	-				+0.0
909	-				+0.5
909	-				+0.5
959	+				+0.4
959	+				-0.4
984	+				-0.8
984	+				+1.3
984	+				-1.6
984	+				+0.4
985	-				-1.1
985	-				-0.4
985	-				+0.4
989	+				-0.1
989	+				-0.5
992	+				+1.1
992	+				-0.1
993	-				+0.6
993	-				-0.2
993	-				+1.2
1,005	+				-0.1
1,006	-				+0.6
1,006	-				+0.3
1,006	-				+0.6
1,009	+				+2.4
1,010	-				+0.6
1,018	+				+1.6
1,018	+				-0.8
1,018	+				-0.8
1,018	+				-0.7
1,019	-				-3.7
1,019	-				+0.7
1,019	-				+0.4
1,027	-				-1.0
1,047	+				-1.2
1,070	+		EX31_RS17045	0.17	+0.8
1,097	+		EX31_RS17045	0.25	-1.4
1,098	-		EX31_RS17045	0.26	-1.6
1,104	+		EX31_RS17045	0.28	-1.6
1,104	+		EX31_RS17045	0.28	+1.3
1,104	+		EX31_RS17045	0.28	+0.6
1,104	+		EX31_RS17045	0.28	-1.7
1,105	-		EX31_RS17045	0.28	+0.4
1,105	-		EX31_RS17045	0.28	-1.6
1,105	-		EX31_RS17045	0.28	+1.8
1,105	-		EX31_RS17045	0.28	-0.7
1,234	+		EX31_RS17045	0.69	-1.0
1,234	+		EX31_RS17045	0.69	+2.2
1,234	+		EX31_RS17045	0.69	-0.0
1,234	+		EX31_RS17045	0.69	+1.0
1,234	+		EX31_RS17045	0.69	+1.5
1,234	+		EX31_RS17045	0.69	+0.2
1,235	-		EX31_RS17045	0.69	+0.4
1,235	-		EX31_RS17045	0.69	-1.4
1,235	-		EX31_RS17045	0.69	-0.7
1,235	-		EX31_RS17045	0.69	-0.1
1,235	-		EX31_RS17045	0.69	-1.6
1,235	-		EX31_RS17045	0.69	-0.0
1,235	-		EX31_RS17045	0.69	+2.2
1,235	-		EX31_RS17045	0.69	+2.2
1,235	-		EX31_RS17045	0.69	-1.1
1,235	-		EX31_RS17045	0.69	+1.4
1,235	-		EX31_RS17045	0.69	-0.2
1,266	-		EX31_RS17045	0.79	+0.9
1,317	+				+0.9
1,318	-				-1.5
1,333	-				-0.3
1,333	-				-0.8
1,333	-				-3.0
1,333	-				+0.0
1,358	+				-0.3
1,358	+				-0.8
1,359	-				+0.2
1,359	-				-0.3
1,359	-				-0.0
1,359	-				+0.4
1,359	-				-0.4
1,367	+				-0.3
1,445	-		EX31_RS17050	0.24	+0.6
1,445	-		EX31_RS17050	0.24	-0.8
1,445	-		EX31_RS17050	0.24	-3.9
1,445	-		EX31_RS17050	0.24	-0.6
1,458	+		EX31_RS17050	0.27	+1.2
1,459	-		EX31_RS17050	0.27	-0.4
1,555	+		EX31_RS17050	0.47	-1.9
1,556	-		EX31_RS17050	0.47	+0.1
1,556	-		EX31_RS17050	0.47	-0.4
1,556	-		EX31_RS17050	0.47	+0.3
1,556	-		EX31_RS17050	0.47	-0.6
1,556	-		EX31_RS17050	0.47	+1.5
1,556	-		EX31_RS17050	0.47	-0.1
1,556	-		EX31_RS17050	0.47	+0.4
1,559	+		EX31_RS17050	0.48	+0.6
1,560	-		EX31_RS17050	0.48	+0.3
1,579	+		EX31_RS17050	0.52	+0.0
1,580	-		EX31_RS17050	0.53	+0.1
1,588	-		EX31_RS17050	0.54	+0.9
1,595	-		EX31_RS17050	0.56	+1.0
1,595	-		EX31_RS17050	0.56	-1.9
1,644	-		EX31_RS17050	0.66	-3.1
1,709	+		EX31_RS17050	0.80	-0.2
1,709	+		EX31_RS17050	0.80	-0.2
1,710	-		EX31_RS17050	0.80	+0.7
1,710	-		EX31_RS17050	0.80	+0.9
1,710	-		EX31_RS17050	0.80	-1.0
1,816	+				+0.9
1,816	+				-0.2
1,816	+				-0.3
1,817	-				+0.4
1,817	-				-1.7
1,817	-				-0.9
1,817	-				+0.2
1,817	-				-2.4
1,817	-				+0.9
1,817	-				+0.1
1,817	-				-0.3
1,817	-				+0.7
1,823	+				-0.4
1,824	-				+0.0
1,857	-				+1.2
1,857	-				-0.7
1,857	-				+0.8
1,866	+				+0.2
1,866	+				+0.0
1,866	+				-1.6
1,867	-				+1.3
1,867	-				+0.3
1,907	+		EX31_RS17055	0.13	-0.5
1,907	+		EX31_RS17055	0.13	-2.3
1,907	+		EX31_RS17055	0.13	-0.0
1,907	+		EX31_RS17055	0.13	+0.5
1,907	+		EX31_RS17055	0.13	-2.2
1,908	-		EX31_RS17055	0.13	+0.1
1,908	-		EX31_RS17055	0.13	-1.0
1,908	-		EX31_RS17055	0.13	+0.5
1,925	+		EX31_RS17055	0.15	+1.5
1,925	+		EX31_RS17055	0.15	-0.2
1,925	+		EX31_RS17055	0.15	-0.4
1,925	+		EX31_RS17055	0.15	-1.9
1,925	+		EX31_RS17055	0.15	+0.4
1,926	-		EX31_RS17055	0.15	+0.4
1,926	-		EX31_RS17055	0.15	+0.9
1,926	-		EX31_RS17055	0.15	-1.8
1,928	+		EX31_RS17055	0.16	+0.5
1,928	+		EX31_RS17055	0.16	-0.5
1,928	+		EX31_RS17055	0.16	+0.1
1,928	+		EX31_RS17055	0.16	-0.1
1,928	+		EX31_RS17055	0.16	+0.1
1,929	-		EX31_RS17055	0.16	-0.6
1,929	-		EX31_RS17055	0.16	+0.1
1,929	-		EX31_RS17055	0.16	-0.2
1,929	-		EX31_RS17055	0.16	+1.1
1,929	-		EX31_RS17055	0.16	+0.1
2,019	-		EX31_RS17055	0.28	+0.3
2,051	+		EX31_RS17055	0.33	-0.1
2,051	+		EX31_RS17055	0.33	+0.3
2,051	+		EX31_RS17055	0.33	-1.1
2,051	+		EX31_RS17055	0.33	+0.5
2,051	+		EX31_RS17055	0.33	-0.1
2,051	+		EX31_RS17055	0.33	-0.3
2,051	+		EX31_RS17055	0.33	+0.4
2,051	+		EX31_RS17055	0.33	-0.6
2,051	+		EX31_RS17055	0.33	+1.0
2,051	+		EX31_RS17055	0.33	+0.1
2,051	+		EX31_RS17055	0.33	-0.9
2,051	+		EX31_RS17055	0.33	-1.1
2,051	+		EX31_RS17055	0.33	+0.2
2,051	+		EX31_RS17055	0.33	+1.3
2,051	+		EX31_RS17055	0.33	-0.4
2,052	-		EX31_RS17055	0.33	+0.9
2,052	-		EX31_RS17055	0.33	-0.3
2,052	-		EX31_RS17055	0.33	-0.1
2,052	-		EX31_RS17055	0.33	+0.9
2,052	-		EX31_RS17055	0.33	+0.4
2,052	-		EX31_RS17055	0.33	-0.3
2,052	-		EX31_RS17055	0.33	-0.3
2,052	-		EX31_RS17055	0.33	-0.2
2,052	-		EX31_RS17055	0.33	-1.3
2,052	-		EX31_RS17055	0.33	+0.3
2,055	+		EX31_RS17055	0.33	+0.4
2,055	+		EX31_RS17055	0.33	-2.9
2,055	+		EX31_RS17055	0.33	+1.3
2,055	+		EX31_RS17055	0.33	+1.5
2,056	-		EX31_RS17055	0.33	+0.6
2,056	-		EX31_RS17055	0.33	+1.2
2,056	-		EX31_RS17055	0.33	-2.2
2,056	-		EX31_RS17055	0.33	-0.5
2,056	-		EX31_RS17055	0.33	-0.1
2,056	-		EX31_RS17055	0.33	+0.8
2,168	-		EX31_RS17055	0.49	-1.6
2,168	-		EX31_RS17055	0.49	-0.8
2,168	-		EX31_RS17055	0.49	-1.0
2,168	-		EX31_RS17055	0.49	+0.9
2,186	+		EX31_RS17055	0.52	+0.4
2,187	-		EX31_RS17055	0.52	-0.3
2,187	-		EX31_RS17055	0.52	+0.6
2,187	-		EX31_RS17055	0.52	+0.7
2,246	+		EX31_RS17055	0.60	-0.7
2,246	+		EX31_RS17055	0.60	+0.2
2,310	+		EX31_RS17055	0.69	+0.9
2,310	+		EX31_RS17055	0.69	+0.5
2,310	+		EX31_RS17055	0.69	+0.8
2,311	-		EX31_RS17055	0.69	+0.2
2,311	-		EX31_RS17055	0.69	-0.2
2,311	-		EX31_RS17055	0.69	+1.0
2,311	-		EX31_RS17055	0.69	+0.4
2,311	-		EX31_RS17055	0.69	+0.9
2,311	-		EX31_RS17055	0.69	-1.7