Strain Fitness in Rahnella sp. WP5 around EX31_RS11845

Experiment: NL-CCM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM
28,922	+				+0.2
28,922	+				+0.7
28,922	+				+0.3
28,923	-				-0.5
28,923	-				+1.2
28,923	-				-0.3
28,923	-				-0.5
28,923	-				-0.0
28,923	-				+0.1
28,923	-				+0.2
28,924	+				+0.5
28,924	+				-0.7
28,924	+				-0.6
28,924	+				-0.1
28,924	+				+0.1
28,924	+				+0.2
28,924	+				+0.6
28,925	-				+0.2
28,925	-				+0.2
28,931	+				-0.0
28,932	-				-0.4
28,950	+				+0.6
28,950	+				-0.4
29,002	-				-0.7
29,002	-				-0.4
29,102	-		EX31_RS11840	0.36	-0.7
29,206	+		EX31_RS11840	0.64	-0.1
29,206	+		EX31_RS11840	0.64	-0.3
29,206	+		EX31_RS11840	0.64	-0.2
29,206	+		EX31_RS11840	0.64	+0.1
29,206	+		EX31_RS11840	0.64	-0.1
29,206	+		EX31_RS11840	0.64	-0.9
29,207	-		EX31_RS11840	0.65	-1.0
29,207	-		EX31_RS11840	0.65	-0.5
29,272	+		EX31_RS11840	0.82	-0.2
29,272	+		EX31_RS11840	0.82	-0.5
29,272	+		EX31_RS11840	0.82	+0.2
29,272	+		EX31_RS11840	0.82	-0.6
29,273	-		EX31_RS11840	0.83	-0.4
29,273	-		EX31_RS11840	0.83	-0.6
29,287	+		EX31_RS11840	0.86	-0.2
29,287	+		EX31_RS11840	0.86	-0.4
29,287	+		EX31_RS11840	0.86	-0.6
29,287	+		EX31_RS11840	0.86	+0.9
29,287	+		EX31_RS11840	0.86	-0.4
29,287	+		EX31_RS11840	0.86	-0.9
29,288	-		EX31_RS11840	0.87	-0.5
29,288	-		EX31_RS11840	0.87	-0.9
29,288	-		EX31_RS11840	0.87	-0.5
29,288	-		EX31_RS11840	0.87	-0.2
29,288	-		EX31_RS11840	0.87	-0.3
29,288	-		EX31_RS11840	0.87	-1.5
29,366	+				+0.1
29,367	-				-0.2
29,367	-				-0.3
29,379	+				+0.1
29,390	-				+1.2
29,414	+				+0.3
29,414	+				+0.1
29,414	+				+1.1
29,414	+				+0.4
29,414	+				-0.7
29,415	-				+0.6
29,415	-				-0.2
29,415	-				-0.1
29,416	+				-0.1
29,416	+				-0.3
29,416	+				-0.6
29,416	+				+0.7
29,416	+				+0.7
29,417	-				-1.7
29,418	+				-0.3
29,418	+				-0.0
29,418	+				-0.1
29,418	+				-0.3
29,418	+				+0.7
29,418	+				-0.4
29,418	+				-0.1
29,435	+				-0.6
29,437	+				+0.2
29,955	+		EX31_RS11845	0.82	+0.4
30,071	+				-0.5
30,072	-				-0.9
30,081	+				+0.1
30,081	+				-0.2
30,081	+				+0.0
30,081	+				+0.0
30,081	+				+0.2
30,119	+				-0.1
30,119	+				-0.5
30,119	+				-0.1
30,119	+				+0.1
30,119	+				+0.0
30,119	+				+0.1
30,119	+				-0.3
30,119	+				-0.5
30,119	+				+0.3
30,119	+				-0.0
30,119	+				-0.7
30,119	+				+0.7
30,119	+				+0.5
30,119	+				-0.6
30,119	+				-0.2
30,120	-				+0.4
30,120	-				+0.4
30,120	-				-0.8
30,120	-				+0.2
30,120	-				-0.4
30,120	-				+0.1
30,120	-				+0.0
30,120	-				+1.2
30,120	-				-1.1
30,120	-				-0.3
30,120	-				-0.1
30,120	-				+0.1
30,120	-				-1.1
30,120	-				+0.7
30,120	-				-0.3
30,120	-				+1.4
30,127	+				+0.0
30,127	+				+0.2
30,127	+				+0.3
30,127	+				-1.3
30,127	+				-0.4
30,127	+				-0.0
30,127	+				+0.6
30,146	+				+0.4
30,146	+				+0.7
30,147	-				-0.6
30,147	-				-1.2
30,147	-				+0.4
30,147	-				-2.3
30,147	-				-0.1
30,161	+				+0.1
30,161	+				+1.3
30,161	+				+0.4
30,161	+				+0.2
30,161	+				-0.3
30,161	+				-0.6
30,162	-				-0.1
30,162	-				+0.2
30,162	-				-0.4
30,162	-				-0.2
30,162	-				-1.1
30,162	-				+0.2
30,163	+				+0.5
30,164	-				-0.1
30,164	-				+0.1
30,164	-				+0.6
30,185	+				+0.4
30,185	+				+0.2
30,185	+				+0.1
30,186	-				+0.3
30,186	-				-0.4
30,186	-				-0.5
30,191	+				+0.0
30,191	+				+0.1
30,191	+				-0.2
30,191	+				+0.3
30,191	+				-0.1
30,191	+				+1.0
30,191	+				-0.7
30,191	+				+0.1
30,192	-				-0.7
30,192	-				-0.3
30,192	-				+0.3
30,192	-				-0.4
30,192	-				+0.1
30,192	-				+0.1
30,215	+				+0.9
30,215	+				-0.4
30,216	-				+0.3
30,216	-				-0.6
30,225	+				-0.0
30,226	-				-0.0
30,226	-				+0.5
30,231	+				-0.0
30,231	+				-0.1
30,231	+				-0.4
30,232	-				+0.3
30,240	-				+0.6
30,326	+				+0.1
30,326	+				+0.1
30,327	-				-0.2
30,327	-				-0.1
30,327	-				-1.3
30,327	-				-0.5
30,327	-				+0.4
30,327	-				+0.3
30,327	-				-0.5
30,334	+				+0.7
30,334	+				+0.5
30,335	-				-0.3
30,335	-				-0.4
30,362	+				+0.3
30,363	-				+0.1
30,406	+				+0.5
30,461	+				+0.7
30,525	+		EX31_RS11850	0.12	-0.3
30,525	+		EX31_RS11850	0.12	-0.4
30,526	-		EX31_RS11850	0.12	+0.1
30,572	+		EX31_RS11850	0.15	-0.4
30,572	+		EX31_RS11850	0.15	+0.0
30,573	-		EX31_RS11850	0.15	-0.2
30,573	-		EX31_RS11850	0.15	-1.0
30,580	+		EX31_RS11850	0.16	+0.2
30,580	+		EX31_RS11850	0.16	-0.8
30,581	-		EX31_RS11850	0.16	-0.6
30,581	-		EX31_RS11850	0.16	+0.4
30,581	-		EX31_RS11850	0.16	-0.1
30,581	-		EX31_RS11850	0.16	-0.8
30,599	+		EX31_RS11850	0.17	-0.3
30,600	-		EX31_RS11850	0.17	+0.7
30,664	+		EX31_RS11850	0.22	+0.4
30,664	+		EX31_RS11850	0.22	-0.3
30,665	-		EX31_RS11850	0.22	-1.0
30,701	+		EX31_RS11850	0.25	+0.1
30,709	+		EX31_RS11850	0.25	+2.5
30,709	+		EX31_RS11850	0.25	-2.4
30,865	-		EX31_RS11850	0.37	-0.9
30,865	-		EX31_RS11850	0.37	-0.3
30,911	+		EX31_RS11850	0.40	-0.4
30,911	+		EX31_RS11850	0.40	-0.9
30,991	-		EX31_RS11850	0.46	-0.1
31,001	-		EX31_RS11850	0.47	-0.2
31,014	+		EX31_RS11850	0.48	+0.6
31,014	+		EX31_RS11850	0.48	-0.0
31,014	+		EX31_RS11850	0.48	+0.2
31,014	+		EX31_RS11850	0.48	+0.2
31,015	-		EX31_RS11850	0.48	-0.4
31,015	-		EX31_RS11850	0.48	+0.3