Strain Fitness in Rahnella sp. WP5 around EX31_RS21660

Experiment: NL-CCM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM
76,117	+		EX31_RS21655	0.16	-0.3
76,118	-		EX31_RS21655	0.16	+0.2
76,132	+		EX31_RS21655	0.18	-0.1
76,136	+		EX31_RS21655	0.18	+0.2
76,136	+		EX31_RS21655	0.18	-0.9
76,136	+		EX31_RS21655	0.18	-0.6
76,136	+		EX31_RS21655	0.18	-0.9
76,137	-		EX31_RS21655	0.18	+0.8
76,137	-		EX31_RS21655	0.18	-0.3
76,137	-		EX31_RS21655	0.18	+0.6
76,137	-		EX31_RS21655	0.18	-1.1
76,137	-		EX31_RS21655	0.18	-0.1
76,340	-		EX31_RS21655	0.37	+0.6
76,340	-		EX31_RS21655	0.37	+0.6
76,363	+		EX31_RS21655	0.39	+0.6
76,363	+		EX31_RS21655	0.39	-1.0
76,363	+		EX31_RS21655	0.39	-0.4
76,364	-		EX31_RS21655	0.39	+0.6
76,364	-		EX31_RS21655	0.39	+0.2
76,364	-		EX31_RS21655	0.39	-2.6
76,370	+		EX31_RS21655	0.39	+0.7
76,370	+		EX31_RS21655	0.39	+0.3
76,398	+		EX31_RS21655	0.42	-0.3
76,539	+		EX31_RS21655	0.55	-0.2
76,539	+		EX31_RS21655	0.55	-0.2
76,539	+		EX31_RS21655	0.55	+0.4
76,539	+		EX31_RS21655	0.55	-0.1
76,539	+		EX31_RS21655	0.55	-0.6
76,539	+		EX31_RS21655	0.55	+0.1
76,539	+		EX31_RS21655	0.55	-1.3
76,539	+		EX31_RS21655	0.55	-0.3
76,540	-		EX31_RS21655	0.55	+0.3
76,540	-		EX31_RS21655	0.55	-0.4
76,540	-		EX31_RS21655	0.55	+0.6
76,579	+		EX31_RS21655	0.58	+0.5
76,581	+		EX31_RS21655	0.59	-1.7
76,581	+		EX31_RS21655	0.59	-0.2
76,581	+		EX31_RS21655	0.59	-0.2
76,581	+		EX31_RS21655	0.59	-0.1
76,581	+		EX31_RS21655	0.59	+0.0
76,581	+		EX31_RS21655	0.59	+0.4
76,581	+		EX31_RS21655	0.59	+0.3
76,581	+		EX31_RS21655	0.59	+0.2
76,581	+		EX31_RS21655	0.59	-0.4
76,581	+		EX31_RS21655	0.59	-0.4
76,581	+		EX31_RS21655	0.59	+0.7
76,582	-		EX31_RS21655	0.59	+0.3
76,582	-		EX31_RS21655	0.59	-0.3
76,582	-		EX31_RS21655	0.59	+0.7
76,582	-		EX31_RS21655	0.59	-0.5
76,582	-		EX31_RS21655	0.59	+1.1
76,648	+		EX31_RS21655	0.65	+0.2
76,648	+		EX31_RS21655	0.65	+0.1
76,684	-		EX31_RS21655	0.68	+0.0
76,684	-		EX31_RS21655	0.68	-1.2
76,714	+		EX31_RS21655	0.71	-0.1
76,775	-		EX31_RS21655	0.76	+1.0
76,847	+		EX31_RS21655	0.83	-0.2
76,847	+		EX31_RS21655	0.83	-0.2
76,848	-		EX31_RS21655	0.83	+0.6
76,848	-		EX31_RS21655	0.83	-0.5
76,848	-		EX31_RS21655	0.83	-0.4
76,969	+				+0.5
76,969	+				-0.5
76,970	-				-0.5
76,992	+				-0.8
76,992	+				+0.5
76,992	+				+0.0
76,993	-				+0.1
76,993	-				+0.6
77,037	+				+0.4
77,037	+				+0.2
77,037	+				+1.0
77,037	+				-0.5
77,039	+				+0.7
77,039	+				-0.0
77,039	+				-0.8
77,040	-				-0.1
77,040	-				-0.2
77,040	-				+0.1
77,040	-				+0.4
77,054	-				-0.5
77,054	-				+0.3
77,147	+		EX31_RS21660	0.11	+0.3
77,147	+		EX31_RS21660	0.11	+0.7
77,147	+		EX31_RS21660	0.11	-0.6
77,147	+		EX31_RS21660	0.11	+0.1
77,147	+		EX31_RS21660	0.11	-0.4
77,147	+		EX31_RS21660	0.11	+0.4
77,147	+		EX31_RS21660	0.11	+0.4
77,147	+		EX31_RS21660	0.11	-0.7
77,147	+		EX31_RS21660	0.11	+0.2
77,147	+		EX31_RS21660	0.11	-0.5
77,148	-		EX31_RS21660	0.11	+2.0
77,148	-		EX31_RS21660	0.11	-0.1
77,148	-		EX31_RS21660	0.11	-0.0
77,148	-		EX31_RS21660	0.11	+0.2
77,169	+		EX31_RS21660	0.15	+0.0
77,169	+		EX31_RS21660	0.15	+0.0
77,169	+		EX31_RS21660	0.15	+0.1
77,169	+		EX31_RS21660	0.15	+0.7
77,169	+		EX31_RS21660	0.15	+0.4
77,169	+		EX31_RS21660	0.15	+1.0
77,169	+		EX31_RS21660	0.15	-1.3
77,169	+		EX31_RS21660	0.15	+0.5
77,169	+		EX31_RS21660	0.15	-0.1
77,169	+		EX31_RS21660	0.15	+0.9
77,170	-		EX31_RS21660	0.15	+0.3
77,170	-		EX31_RS21660	0.15	-0.8
77,170	-		EX31_RS21660	0.15	-0.2
77,170	-		EX31_RS21660	0.15	-0.4
77,170	-		EX31_RS21660	0.15	+0.2
77,173	+		EX31_RS21660	0.16	+1.5
77,174	-		EX31_RS21660	0.16	+0.6
77,216	+		EX31_RS21660	0.24	-0.7
77,216	+		EX31_RS21660	0.24	+0.9
77,244	+		EX31_RS21660	0.29	+2.0
77,245	-		EX31_RS21660	0.29	-0.7
77,392	-		EX31_RS21660	0.57	+1.0
77,543	-		EX31_RS21660	0.85	+1.5
77,544	+		EX31_RS21660	0.85	+0.7
77,544	+		EX31_RS21660	0.85	-0.7
77,544	+		EX31_RS21660	0.85	+0.6
77,545	-		EX31_RS21660	0.85	-2.7
77,545	-		EX31_RS21660	0.85	+0.6
77,545	-		EX31_RS21660	0.85	+0.9
77,545	-		EX31_RS21660	0.85	+0.4
77,545	-		EX31_RS21660	0.85	-0.1
77,545	-		EX31_RS21660	0.85	+0.4
77,545	-		EX31_RS21660	0.85	-0.3
77,579	+				+0.2
77,579	+				+0.4
77,579	+				-0.8
77,579	+				-0.7
77,579	+				-0.6
77,579	+				-0.4
77,579	+				+0.2
77,579	+				+0.7
77,580	-				+0.0
77,580	-				+0.1
77,580	-				-1.0
77,580	-				+0.5
77,580	-				+0.2
77,580	-				+1.3
77,580	-				+0.8
77,580	-				+0.1
77,580	-				-0.4
77,580	-				+0.5
77,580	-				+0.4
77,584	+				-0.7
77,584	+				+0.3
77,584	+				+0.4
77,585	-				+0.9
77,585	-				-2.1
77,585	-				-0.4
77,585	-				+0.3
77,585	-				-0.5
77,585	-				+0.8
77,585	-				+0.3
77,585	-				+0.4
77,599	-				-0.5
77,601	+				+1.1
77,602	-				-0.4
77,602	-				-1.7
77,602	-				+0.8
77,620	+				-0.4
77,620	+				-0.3
77,620	+				+0.5
77,620	+				-0.4
77,620	+				-0.1
77,620	+				-0.4
77,621	-				+0.7
77,621	-				+0.7
77,621	-				-0.3
77,661	+				+0.1
77,662	-				-0.8
77,729	+				+0.5
77,730	-				+0.6
77,740	-				+0.6
77,779	+		EX31_RS21665	0.15	+0.4
77,794	+		EX31_RS21665	0.17	+0.4
77,846	+		EX31_RS21665	0.24	-0.5
77,846	+		EX31_RS21665	0.24	-0.2
77,846	+		EX31_RS21665	0.24	+0.9
77,846	+		EX31_RS21665	0.24	-0.7
77,846	+		EX31_RS21665	0.24	+0.5
77,847	-		EX31_RS21665	0.24	-0.2
77,847	-		EX31_RS21665	0.24	+0.1
77,847	-		EX31_RS21665	0.24	+0.8
77,847	-		EX31_RS21665	0.24	-0.7
77,847	-		EX31_RS21665	0.24	-0.2
77,847	-		EX31_RS21665	0.24	-1.1
77,847	-		EX31_RS21665	0.24	+0.5
77,847	-		EX31_RS21665	0.24	-0.4
77,847	-		EX31_RS21665	0.24	+1.6
77,854	+		EX31_RS21665	0.25	-0.7
77,854	+		EX31_RS21665	0.25	-0.0
77,854	+		EX31_RS21665	0.25	+0.3
77,855	-		EX31_RS21665	0.25	+0.4
77,939	+		EX31_RS21665	0.37	-0.8
77,939	+		EX31_RS21665	0.37	-0.1
77,950	+		EX31_RS21665	0.39	+0.2
77,951	-		EX31_RS21665	0.39	-1.5
77,951	-		EX31_RS21665	0.39	+0.5
77,951	-		EX31_RS21665	0.39	+0.1
77,951	-		EX31_RS21665	0.39	+0.6
77,951	-		EX31_RS21665	0.39	+0.3
77,951	-		EX31_RS21665	0.39	+2.6
77,951	-		EX31_RS21665	0.39	-0.4
78,193	+		EX31_RS21665	0.73	+0.5
78,193	+		EX31_RS21665	0.73	-0.4
78,193	+		EX31_RS21665	0.73	-0.2
78,193	+		EX31_RS21665	0.73	+0.1
78,193	+		EX31_RS21665	0.73	+0.1
78,194	-		EX31_RS21665	0.73	+0.2
78,194	-		EX31_RS21665	0.73	-0.1
78,194	-		EX31_RS21665	0.73	+0.5
78,194	-		EX31_RS21665	0.73	-0.6
78,194	-		EX31_RS21665	0.73	+0.8
78,194	-		EX31_RS21665	0.73	-0.2
78,194	-		EX31_RS21665	0.73	+0.4
78,194	-		EX31_RS21665	0.73	-0.1
78,194	-		EX31_RS21665	0.73	-1.5
78,194	-		EX31_RS21665	0.73	+0.3
78,380	+				-0.4
78,380	+				-2.1
78,381	-				-0.9
78,395	-				+0.1
78,395	-				+0.6
78,413	+				-0.9
78,414	-				+0.2
78,450	+				+0.7
78,492	+				-0.9
78,492	+				-0.6
78,492	+				+0.4
78,493	-				+0.2
78,493	-				-1.0
78,504	-				+0.3
78,504	-				-1.1
78,504	-				-0.8
78,504	-				-0.3
78,504	-				+0.4
78,505	+				-0.9
78,505	+				+0.5
78,505	+				+0.5
78,505	+				+0.3
78,505	+				-0.7
78,505	+				-0.4
78,505	+				-0.7
78,505	+				+0.4
78,505	+				-1.8
78,505	+				-0.7
78,505	+				-0.5
78,506	-				+0.6
78,506	-				-0.3
78,506	-				+0.7
78,506	-				-0.3
78,506	-				-0.1
78,506	-				-0.1
78,506	-				-0.4
78,506	-				+0.1
78,506	-				+0.3
78,506	-				-0.1
78,506	-				-0.3
78,581	+				-0.0
78,581	+				+0.1
78,582	-				+0.2
78,582	-				-1.3
78,582	-				-0.3
78,597	+		EX31_RS21670	0.11	+0.1
78,597	+		EX31_RS21670	0.11	+1.3
78,598	-		EX31_RS21670	0.11	-0.5
78,620	+		EX31_RS21670	0.14	+0.3
78,620	+		EX31_RS21670	0.14	-0.2