Experiment: NL-CCM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS20730 and EX31_RS20735 overlap by 4 nucleotides EX31_RS20735 and EX31_RS20740 overlap by 4 nucleotides
EX31_RS20730: EX31_RS20730 - exodeoxyribonuclease V subunit alpha, at 787,375 to 789,429
_RS20730
EX31_RS20735: EX31_RS20735 - exodeoxyribonuclease V subunit beta, at 789,426 to 793,109
_RS20735
EX31_RS20740: EX31_RS20740 - exodeoxyribonuclease V subunit gamma, at 793,106 to 796,564
_RS20740
Position (kb) 789
790
791
792
793
794 Strain fitness (log2 ratio) -2
-1
0
1
2 at 788.626 kb on - strand, within EX31_RS20730 at 788.783 kb on - strand, within EX31_RS20730 at 788.783 kb on - strand, within EX31_RS20730 at 788.842 kb on - strand, within EX31_RS20730 at 789.042 kb on - strand, within EX31_RS20730 at 789.538 kb on - strand at 789.542 kb on - strand at 789.569 kb on - strand at 790.231 kb on - strand, within EX31_RS20735 at 790.235 kb on - strand, within EX31_RS20735 at 790.235 kb on - strand, within EX31_RS20735 at 790.235 kb on - strand, within EX31_RS20735 at 790.235 kb on - strand, within EX31_RS20735 at 790.235 kb on - strand, within EX31_RS20735 at 790.300 kb on + strand, within EX31_RS20735 at 790.301 kb on - strand, within EX31_RS20735 at 790.301 kb on - strand, within EX31_RS20735 at 790.301 kb on - strand, within EX31_RS20735 at 790.301 kb on - strand, within EX31_RS20735 at 790.301 kb on - strand, within EX31_RS20735 at 790.301 kb on - strand, within EX31_RS20735 at 790.301 kb on - strand, within EX31_RS20735 at 790.418 kb on - strand, within EX31_RS20735 at 790.803 kb on - strand, within EX31_RS20735 at 791.777 kb on - strand, within EX31_RS20735 at 791.783 kb on - strand, within EX31_RS20735 at 791.783 kb on - strand, within EX31_RS20735 at 793.126 kb on + strand at 793.140 kb on + strand at 793.140 kb on + strand at 793.140 kb on + strand at 793.141 kb on - strand at 793.141 kb on - strand at 793.161 kb on - strand at 793.161 kb on - strand at 793.161 kb on - strand at 793.447 kb on - strand at 793.685 kb on - strand, within EX31_RS20740
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM remove 788,626 - EX31_RS20730 0.61 -0.7 788,783 - EX31_RS20730 0.69 -0.2 788,783 - EX31_RS20730 0.69 -1.0 788,842 - EX31_RS20730 0.71 -0.7 789,042 - EX31_RS20730 0.81 -0.4 789,538 - +2.5 789,542 - -0.4 789,569 - +0.5 790,231 - EX31_RS20735 0.22 -1.5 790,235 - EX31_RS20735 0.22 +0.2 790,235 - EX31_RS20735 0.22 -0.9 790,235 - EX31_RS20735 0.22 +0.8 790,235 - EX31_RS20735 0.22 -0.1 790,235 - EX31_RS20735 0.22 +2.0 790,300 + EX31_RS20735 0.24 +1.5 790,301 - EX31_RS20735 0.24 +0.1 790,301 - EX31_RS20735 0.24 -0.4 790,301 - EX31_RS20735 0.24 +0.7 790,301 - EX31_RS20735 0.24 +0.1 790,301 - EX31_RS20735 0.24 -0.4 790,301 - EX31_RS20735 0.24 -0.5 790,301 - EX31_RS20735 0.24 +0.1 790,418 - EX31_RS20735 0.27 -2.2 790,803 - EX31_RS20735 0.37 -0.1 791,777 - EX31_RS20735 0.64 -1.8 791,783 - EX31_RS20735 0.64 +2.0 791,783 - EX31_RS20735 0.64 -1.1 793,126 + -0.2 793,140 + -0.3 793,140 + -0.6 793,140 + -1.0 793,141 - +0.4 793,141 - +0.4 793,161 - -0.1 793,161 - -0.1 793,161 - -0.8 793,447 - -1.1 793,685 - EX31_RS20740 0.17 +0.6
Or see this region's nucleotide sequence