Strain Fitness in Rahnella sp. WP5 around EX31_RS08145

Experiment: NL-CCM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM
119,617	-		EX31_RS08140	0.46	-0.3
119,642	-		EX31_RS08140	0.48	-0.1
119,738	-		EX31_RS08140	0.55	-1.5
119,964	-		EX31_RS08140	0.70	-1.2
120,059	+		EX31_RS08140	0.77	-0.5
120,060	-		EX31_RS08140	0.77	-1.1
120,060	-		EX31_RS08140	0.77	+1.5
120,061	+		EX31_RS08140	0.77	-0.7
120,062	-		EX31_RS08140	0.77	+0.5
120,062	-		EX31_RS08140	0.77	-0.1
120,062	-		EX31_RS08140	0.77	+0.5
120,330	-				+0.3
120,330	-				-0.4
120,405	+				-0.9
120,406	-				+1.0
120,406	-				+0.3
120,406	-				+0.8
120,423	+				-0.3
120,424	-				+0.1
120,424	-				+0.2
120,424	-				-0.6
120,424	-				-0.2
120,424	-				-0.2
120,424	-				+0.8
120,440	+				-0.2
120,441	-				+0.9
120,441	-				-0.4
120,597	+				-0.1
120,597	+				-0.4
120,598	-				-0.9
120,598	-				-0.2
120,598	-				-0.1
120,598	-				-0.3
120,598	-				-0.3
120,598	-				-0.7
120,598	-				-1.4
120,598	-				-0.5
120,598	-				+1.0
120,598	-				+0.5
120,598	-				-1.1
120,673	+				-0.1
120,674	-				-0.1
120,726	+				-0.3
120,727	-				-0.1
120,727	-				+0.6
120,741	+				+0.2
120,797	-		EX31_RS08145	0.11	-0.5
120,813	+		EX31_RS08145	0.12	+0.4
120,813	+		EX31_RS08145	0.12	+0.7
120,813	+		EX31_RS08145	0.12	+0.2
120,813	+		EX31_RS08145	0.12	-0.5
120,813	+		EX31_RS08145	0.12	+0.0
120,814	-		EX31_RS08145	0.12	-0.5
120,814	-		EX31_RS08145	0.12	-0.5
120,814	-		EX31_RS08145	0.12	-1.3
120,845	-		EX31_RS08145	0.13	+0.6
120,898	+		EX31_RS08145	0.15	-0.5
120,928	-		EX31_RS08145	0.16	-0.6
120,988	-		EX31_RS08145	0.18	-0.3
121,062	+		EX31_RS08145	0.21	-1.7
121,082	-		EX31_RS08145	0.21	+0.1
121,082	-		EX31_RS08145	0.21	-0.2
121,094	+		EX31_RS08145	0.22	-0.3
121,095	-		EX31_RS08145	0.22	-0.1
121,302	+		EX31_RS08145	0.29	-0.9
121,307	+		EX31_RS08145	0.29	+0.1
121,308	-		EX31_RS08145	0.29	-0.6
121,308	-		EX31_RS08145	0.29	+0.2
121,365	+		EX31_RS08145	0.31	-0.0
121,365	+		EX31_RS08145	0.31	-0.2
121,366	-		EX31_RS08145	0.31	-0.2
121,366	-		EX31_RS08145	0.31	-0.3
121,370	+		EX31_RS08145	0.32	+0.4
121,370	+		EX31_RS08145	0.32	-0.4
121,370	+		EX31_RS08145	0.32	-0.7
121,370	+		EX31_RS08145	0.32	+0.1
121,371	-		EX31_RS08145	0.32	+0.1
121,371	-		EX31_RS08145	0.32	-0.1
121,371	-		EX31_RS08145	0.32	+0.1
121,371	-		EX31_RS08145	0.32	-0.1
121,447	+		EX31_RS08145	0.34	+0.2
121,448	-		EX31_RS08145	0.34	-0.1
121,457	+		EX31_RS08145	0.35	-0.0
121,527	+		EX31_RS08145	0.37	-1.1
121,551	+		EX31_RS08145	0.38	-1.4
121,587	-		EX31_RS08145	0.39	-0.6
121,587	-		EX31_RS08145	0.39	+0.7
121,643	+		EX31_RS08145	0.41	-0.4
121,665	+		EX31_RS08145	0.42	-0.6
121,684	+		EX31_RS08145	0.43	-0.1
121,686	+		EX31_RS08145	0.43	-0.0
121,686	+		EX31_RS08145	0.43	-0.1
121,686	+		EX31_RS08145	0.43	+0.1
121,686	+		EX31_RS08145	0.43	+0.2
121,686	+		EX31_RS08145	0.43	-0.1
121,686	+		EX31_RS08145	0.43	-0.4
121,686	+		EX31_RS08145	0.43	-0.7
121,686	+		EX31_RS08145	0.43	-0.6
121,686	+		EX31_RS08145	0.43	+0.0
121,686	+		EX31_RS08145	0.43	-3.1
121,686	+		EX31_RS08145	0.43	+0.2
121,686	+		EX31_RS08145	0.43	+0.2
121,686	+		EX31_RS08145	0.43	+0.4
121,686	+		EX31_RS08145	0.43	-0.3
121,686	+		EX31_RS08145	0.43	-0.9
121,686	+		EX31_RS08145	0.43	-0.3
121,686	+		EX31_RS08145	0.43	+0.1
121,686	+		EX31_RS08145	0.43	+1.2
121,687	-		EX31_RS08145	0.43	+0.3
121,687	-		EX31_RS08145	0.43	-0.2
121,687	-		EX31_RS08145	0.43	-0.1
121,687	-		EX31_RS08145	0.43	-0.8
121,687	-		EX31_RS08145	0.43	+0.4
121,687	-		EX31_RS08145	0.43	-0.4
121,687	-		EX31_RS08145	0.43	-0.4
121,687	-		EX31_RS08145	0.43	-0.7
121,687	-		EX31_RS08145	0.43	+0.1
121,687	-		EX31_RS08145	0.43	-0.6
121,687	-		EX31_RS08145	0.43	-0.4
121,693	+		EX31_RS08145	0.43	-0.3
121,693	+		EX31_RS08145	0.43	-0.8
121,693	+		EX31_RS08145	0.43	-0.2
121,693	+		EX31_RS08145	0.43	-0.4
121,693	+		EX31_RS08145	0.43	+0.5
121,694	-		EX31_RS08145	0.43	-0.8
121,694	-		EX31_RS08145	0.43	+0.1
121,705	+		EX31_RS08145	0.43	+0.7
121,705	+		EX31_RS08145	0.43	-0.8
121,755	+		EX31_RS08145	0.45	-0.8
121,755	+		EX31_RS08145	0.45	-0.6
121,755	+		EX31_RS08145	0.45	+0.4
121,760	-		EX31_RS08145	0.45	-1.0
121,760	-		EX31_RS08145	0.45	-1.0
121,760	-		EX31_RS08145	0.45	-0.2
121,760	-		EX31_RS08145	0.45	+0.1
121,760	-		EX31_RS08145	0.45	-0.8
121,760	-		EX31_RS08145	0.45	-0.0
121,835	+		EX31_RS08145	0.48	-0.6
121,835	+		EX31_RS08145	0.48	-1.5
121,835	+		EX31_RS08145	0.48	-1.2
121,835	+		EX31_RS08145	0.48	+0.0
121,836	-		EX31_RS08145	0.48	+0.8
121,836	-		EX31_RS08145	0.48	+0.0
121,836	-		EX31_RS08145	0.48	-0.6
121,836	-		EX31_RS08145	0.48	-0.6
121,836	-		EX31_RS08145	0.48	-0.1
121,836	-		EX31_RS08145	0.48	-0.0
121,836	-		EX31_RS08145	0.48	-0.5
121,864	-		EX31_RS08145	0.49	-0.0
121,865	+		EX31_RS08145	0.49	+0.1
121,865	+		EX31_RS08145	0.49	-0.1
121,866	-		EX31_RS08145	0.49	-1.4
121,944	-		EX31_RS08145	0.52	-0.7
122,076	+		EX31_RS08145	0.56	+0.0
122,077	-		EX31_RS08145	0.57	+0.4
122,077	-		EX31_RS08145	0.57	-0.2
122,077	-		EX31_RS08145	0.57	-0.3
122,077	-		EX31_RS08145	0.57	+0.3
122,147	+		EX31_RS08145	0.59	+0.7
122,187	+		EX31_RS08145	0.60	-0.1
122,187	+		EX31_RS08145	0.60	+0.3
122,187	+		EX31_RS08145	0.60	-0.2
122,188	-		EX31_RS08145	0.60	-0.4
122,188	-		EX31_RS08145	0.60	-0.1
122,195	-		EX31_RS08145	0.61	-0.2
122,207	+		EX31_RS08145	0.61	-1.9
122,312	+		EX31_RS08145	0.65	-1.3
122,313	-		EX31_RS08145	0.65	-0.5
122,313	-		EX31_RS08145	0.65	-1.3
122,323	+		EX31_RS08145	0.65	-0.3
122,323	+		EX31_RS08145	0.65	+0.6
122,324	-		EX31_RS08145	0.65	-1.6
122,416	+		EX31_RS08145	0.68	-0.6
122,448	+		EX31_RS08145	0.70	+0.2
122,449	-		EX31_RS08145	0.70	-0.4
122,541	+		EX31_RS08145	0.73	+0.1
122,542	-		EX31_RS08145	0.73	+0.2
122,572	-		EX31_RS08145	0.74	+0.2
122,574	+		EX31_RS08145	0.74	+0.6
122,574	+		EX31_RS08145	0.74	-0.1
122,575	-		EX31_RS08145	0.74	-0.3
122,575	-		EX31_RS08145	0.74	-2.7
122,575	-		EX31_RS08145	0.74	+0.0
122,575	-		EX31_RS08145	0.74	-1.0
122,651	+		EX31_RS08145	0.77	-0.4
122,652	-		EX31_RS08145	0.77	+0.1
122,652	-		EX31_RS08145	0.77	-0.2
122,652	-		EX31_RS08145	0.77	-0.2
122,652	-		EX31_RS08145	0.77	-0.8
122,652	-		EX31_RS08145	0.77	-0.5
122,652	-		EX31_RS08145	0.77	-0.1
122,652	-		EX31_RS08145	0.77	-0.4
122,878	+		EX31_RS08145	0.85	+0.4
122,905	-		EX31_RS08145	0.86	-0.1
123,020	-		EX31_RS08145	0.90	-0.5
123,038	+				-0.4
123,038	+				-0.4
123,038	+				-0.4
123,038	+				-0.1
123,039	-				-0.8
123,103	-				-0.5
123,183	-				-0.2
123,357	+				-0.7
123,357	+				-0.7
123,357	+				+0.1
123,358	-				+0.2
123,369	-				-0.9
123,487	-				+0.4
123,488	+				+0.5
123,489	-				+1.1
123,489	-				-0.1
123,489	-				-0.5
123,489	-				-0.0
123,489	-				-0.6
123,538	-		EX31_RS08150	0.13	-0.4
123,538	-		EX31_RS08150	0.13	+0.3
123,538	-		EX31_RS08150	0.13	-0.7
123,538	-		EX31_RS08150	0.13	+0.0
123,538	-		EX31_RS08150	0.13	+0.1
123,538	-		EX31_RS08150	0.13	+0.1
123,696	+		EX31_RS08150	0.25	+0.7
123,696	+		EX31_RS08150	0.25	+0.3
123,696	+		EX31_RS08150	0.25	+0.3
123,696	+		EX31_RS08150	0.25	-0.1
123,697	-		EX31_RS08150	0.25	-0.8
123,697	-		EX31_RS08150	0.25	+0.2
123,697	-		EX31_RS08150	0.25	-0.1
123,697	-		EX31_RS08150	0.25	-0.3
123,756	-		EX31_RS08150	0.30	-0.2
123,822	+		EX31_RS08150	0.35	-0.7
123,822	+		EX31_RS08150	0.35	-1.1
123,823	-		EX31_RS08150	0.35	-0.9
123,826	+		EX31_RS08150	0.35	-0.9
123,826	+		EX31_RS08150	0.35	-0.1
123,827	-		EX31_RS08150	0.35	-0.2
123,827	-		EX31_RS08150	0.35	-0.3
123,827	-		EX31_RS08150	0.35	-0.2
123,827	-		EX31_RS08150	0.35	+0.6
123,827	-		EX31_RS08150	0.35	-1.3
123,827	-		EX31_RS08150	0.35	+0.7
123,827	-		EX31_RS08150	0.35	-0.7
123,831	+		EX31_RS08150	0.35	+0.2
123,831	+		EX31_RS08150	0.35	+0.2
123,831	+		EX31_RS08150	0.35	+0.0
123,831	+		EX31_RS08150	0.35	-0.5
123,832	-		EX31_RS08150	0.36	-0.5
123,832	-		EX31_RS08150	0.36	-1.4
123,832	-		EX31_RS08150	0.36	-0.5
123,853	-		EX31_RS08150	0.37	-0.4
123,910	+		EX31_RS08150	0.42	-1.2
123,911	-		EX31_RS08150	0.42	-1.2
123,911	-		EX31_RS08150	0.42	+0.8
123,962	+		EX31_RS08150	0.45	+0.2
123,963	-		EX31_RS08150	0.46	+0.9
123,963	-		EX31_RS08150	0.46	+0.1
123,963	-		EX31_RS08150	0.46	-0.3
123,963	-		EX31_RS08150	0.46	-0.7
124,002	+		EX31_RS08150	0.49	+0.0
124,002	+		EX31_RS08150	0.49	+0.1
124,002	+		EX31_RS08150	0.49	-0.5
124,003	-		EX31_RS08150	0.49	-0.9
124,003	-		EX31_RS08150	0.49	-1.5
124,003	-		EX31_RS08150	0.49	-0.5
124,017	+		EX31_RS08150	0.50	+0.6
124,017	+		EX31_RS08150	0.50	-0.0
124,018	-		EX31_RS08150	0.50	-1.0
124,018	-		EX31_RS08150	0.50	-1.1
124,035	+		EX31_RS08150	0.51	-0.7
124,177	-		EX31_RS08150	0.62	-1.3
124,250	-		EX31_RS08150	0.68	-0.5
124,250	-		EX31_RS08150	0.68	-1.4