Strain Fitness in Rahnella sp. WP5 around EX31_RS03120

Experiment: NL-CCM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM
105,842	+		EX31_RS03110	0.34	-0.5
105,842	+		EX31_RS03110	0.34	-0.3
105,842	+		EX31_RS03110	0.34	+0.5
105,843	-		EX31_RS03110	0.34	-0.7
105,843	-		EX31_RS03110	0.34	+0.1
105,843	-		EX31_RS03110	0.34	-0.6
105,926	+		EX31_RS03110	0.50	-0.1
105,927	-		EX31_RS03110	0.50	+0.5
105,986	-		EX31_RS03110	0.61	-0.4
105,986	-		EX31_RS03110	0.61	+0.3
106,013	+		EX31_RS03110	0.66	-0.7
106,014	-		EX31_RS03110	0.67	+0.5
106,014	-		EX31_RS03110	0.67	-0.1
106,022	+		EX31_RS03110	0.68	+0.0
106,023	-		EX31_RS03110	0.68	+0.9
106,023	-		EX31_RS03110	0.68	-1.1
106,109	+		EX31_RS03110	0.85	-0.3
106,109	+		EX31_RS03110	0.85	+0.3
106,109	+		EX31_RS03110	0.85	-0.1
106,159	+				+0.0
106,160	-				+0.2
106,176	+				+0.2
106,177	-				+0.2
106,177	-				+0.2
106,226	+				-1.4
106,227	-				+0.2
106,242	-				+0.4
106,242	-				-0.7
106,253	+		EX31_RS03115	0.11	+1.7
106,296	+		EX31_RS03115	0.18	+0.0
106,328	+		EX31_RS03115	0.24	+0.6
106,328	+		EX31_RS03115	0.24	+0.4
106,328	+		EX31_RS03115	0.24	+1.2
106,328	+		EX31_RS03115	0.24	+0.5
106,329	-		EX31_RS03115	0.25	+0.3
106,329	-		EX31_RS03115	0.25	+0.8
106,476	+		EX31_RS03115	0.51	+0.2
106,477	-		EX31_RS03115	0.52	-0.2
106,522	+		EX31_RS03115	0.60	+0.1
106,522	+		EX31_RS03115	0.60	+0.1
106,522	+		EX31_RS03115	0.60	+0.3
106,522	+		EX31_RS03115	0.60	+0.5
106,522	+		EX31_RS03115	0.60	+0.5
106,523	-		EX31_RS03115	0.60	-0.8
106,523	-		EX31_RS03115	0.60	-0.1
106,524	+		EX31_RS03115	0.60	-0.1
106,524	+		EX31_RS03115	0.60	+0.1
106,524	+		EX31_RS03115	0.60	+0.8
106,524	+		EX31_RS03115	0.60	+0.4
106,524	+		EX31_RS03115	0.60	-0.1
106,638	+		EX31_RS03115	0.81	+0.7
106,661	-		EX31_RS03115	0.85	+0.1
106,661	-		EX31_RS03115	0.85	+0.5
106,670	+		EX31_RS03115	0.87	+0.1
106,671	-		EX31_RS03115	0.87	+0.2
106,672	+		EX31_RS03115	0.87	+0.8
106,672	+		EX31_RS03115	0.87	+0.3
106,672	+		EX31_RS03115	0.87	+0.3
106,672	+		EX31_RS03115	0.87	-0.2
106,673	-		EX31_RS03115	0.88	+0.1
106,673	-		EX31_RS03115	0.88	-0.2
106,673	-		EX31_RS03115	0.88	+0.7
106,673	-		EX31_RS03115	0.88	-0.8
106,705	+				-0.2
106,705	+				+0.1
106,705	+				+0.3
106,706	-				-0.2
106,706	-				-0.4
106,759	+				+0.3
106,866	-		EX31_RS03120	0.13	+0.2
106,951	-		EX31_RS03120	0.24	+0.6
106,976	-		EX31_RS03120	0.27	-0.5
106,985	+		EX31_RS03120	0.28	+0.1
106,985	+		EX31_RS03120	0.28	-0.8
106,986	-		EX31_RS03120	0.28	+0.1
106,986	-		EX31_RS03120	0.28	+0.2
106,986	-		EX31_RS03120	0.28	+0.4
107,026	+		EX31_RS03120	0.33	+0.1
107,026	+		EX31_RS03120	0.33	+0.2
107,027	-		EX31_RS03120	0.33	+0.0
107,102	+		EX31_RS03120	0.43	+0.1
107,113	+		EX31_RS03120	0.44	+0.9
107,113	+		EX31_RS03120	0.44	+0.0
107,113	+		EX31_RS03120	0.44	-0.9
107,113	+		EX31_RS03120	0.44	+0.3
107,114	-		EX31_RS03120	0.44	-1.2
107,195	+		EX31_RS03120	0.55	-0.2
107,195	+		EX31_RS03120	0.55	+0.0
107,195	+		EX31_RS03120	0.55	-0.3
107,196	-		EX31_RS03120	0.55	+1.2
107,199	+		EX31_RS03120	0.55	-0.5
107,200	-		EX31_RS03120	0.55	+0.3
107,212	+		EX31_RS03120	0.57	+1.2
107,213	-		EX31_RS03120	0.57	+0.2
107,324	+		EX31_RS03120	0.71	+0.7
107,342	-		EX31_RS03120	0.73	+0.7
107,431	+		EX31_RS03120	0.84	+0.7
107,438	+		EX31_RS03120	0.85	-0.5
107,439	-		EX31_RS03120	0.85	-0.3
107,442	+		EX31_RS03120	0.85	+0.1
107,442	+		EX31_RS03120	0.85	+0.8
107,442	+		EX31_RS03120	0.85	+1.2
107,442	+		EX31_RS03120	0.85	-0.2
107,442	+		EX31_RS03120	0.85	+0.7
107,443	-		EX31_RS03120	0.86	+0.9
107,443	-		EX31_RS03120	0.86	+0.2
107,443	-		EX31_RS03120	0.86	+1.5
107,443	-		EX31_RS03120	0.86	+0.0
107,443	-		EX31_RS03120	0.86	-0.5
107,443	-		EX31_RS03120	0.86	+1.0
107,621	+				+1.0
107,656	+				-0.5
107,656	+				+0.3
107,681	+				+0.1
107,682	-				+0.1
107,682	-				+0.3
107,682	-				-0.7
107,738	+				+0.3
107,738	+				+0.3
107,739	-				-0.1
107,739	-				+0.3
107,739	-				-0.1
107,792	+				-0.3
107,792	+				+0.2
107,793	-				+0.1
107,807	+				+0.2
107,808	-				+0.6
107,808	-				+0.0
107,808	-				+0.2
107,808	-				+0.5
107,808	-				+0.1
107,808	-				-0.1
107,852	-		EX31_RS03125	0.11	-0.3
107,994	-		EX31_RS03125	0.17	-0.2
107,994	-		EX31_RS03125	0.17	+0.5
107,994	-		EX31_RS03125	0.17	+0.3
108,032	+		EX31_RS03125	0.19	+0.2
108,032	+		EX31_RS03125	0.19	-0.8
108,032	+		EX31_RS03125	0.19	+0.2
108,033	-		EX31_RS03125	0.19	+0.7
108,033	-		EX31_RS03125	0.19	+1.1
108,033	-		EX31_RS03125	0.19	+0.2
108,033	-		EX31_RS03125	0.19	+0.5
108,041	+		EX31_RS03125	0.19	+1.2
108,042	-		EX31_RS03125	0.19	+0.5
108,044	+		EX31_RS03125	0.19	-0.2
108,045	-		EX31_RS03125	0.19	-2.2
108,045	-		EX31_RS03125	0.19	-0.3
108,045	-		EX31_RS03125	0.19	+0.2
108,137	+		EX31_RS03125	0.23	+0.0
108,137	+		EX31_RS03125	0.23	-0.4
108,137	+		EX31_RS03125	0.23	+0.4
108,137	+		EX31_RS03125	0.23	+0.9
108,197	+		EX31_RS03125	0.25	+0.4
108,197	+		EX31_RS03125	0.25	+0.4
108,207	-		EX31_RS03125	0.26	-0.3
108,251	+		EX31_RS03125	0.28	-0.0
108,252	-		EX31_RS03125	0.28	-1.2
108,252	-		EX31_RS03125	0.28	+0.4
108,292	+		EX31_RS03125	0.29	+0.8
108,292	+		EX31_RS03125	0.29	+0.1
108,293	-		EX31_RS03125	0.29	+0.0
108,328	+		EX31_RS03125	0.31	-1.2
108,359	+		EX31_RS03125	0.32	+0.4
108,374	+		EX31_RS03125	0.33	+0.5
108,374	+		EX31_RS03125	0.33	+0.5
108,374	+		EX31_RS03125	0.33	-0.9
108,375	-		EX31_RS03125	0.33	+0.1
108,375	-		EX31_RS03125	0.33	-0.5
108,439	+		EX31_RS03125	0.35	-0.1
108,439	+		EX31_RS03125	0.35	+0.2
108,440	-		EX31_RS03125	0.35	+0.5
108,440	-		EX31_RS03125	0.35	-1.7
108,440	-		EX31_RS03125	0.35	+1.4
108,442	+		EX31_RS03125	0.35	+0.4
108,442	+		EX31_RS03125	0.35	-0.0
108,443	-		EX31_RS03125	0.35	-1.5
108,443	-		EX31_RS03125	0.35	+0.1
108,463	+		EX31_RS03125	0.36	+0.1
108,463	+		EX31_RS03125	0.36	+1.0
108,482	+		EX31_RS03125	0.37	-2.4
108,482	+		EX31_RS03125	0.37	+0.4
108,482	+		EX31_RS03125	0.37	+0.1
108,482	+		EX31_RS03125	0.37	+0.6
108,482	+		EX31_RS03125	0.37	-0.2
108,483	-		EX31_RS03125	0.37	+0.4
108,483	-		EX31_RS03125	0.37	+1.5
108,484	+		EX31_RS03125	0.37	+0.0
108,485	-		EX31_RS03125	0.37	+0.0
108,485	-		EX31_RS03125	0.37	+0.3