Strain Fitness in Rahnella sp. WP5 around EX31_RS21970

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
137,070	-				-1.3
137,070	-				-0.2
137,073	+				-1.0
137,091	+				+0.1
137,091	+				-0.4
137,092	-				+0.1
137,092	-				-0.4
137,092	-				+1.1
137,092	-				+1.2
137,146	+				+1.7
137,147	-				-0.3
137,163	-				+0.4
137,171	+				-0.0
137,190	+				-0.4
137,221	+				-0.1
137,221	+				-0.0
137,221	+				-0.4
137,268	-				+0.7
137,330	+		EX31_RS21965	0.15	+1.3
137,330	+		EX31_RS21965	0.15	+1.5
137,331	-		EX31_RS21965	0.15	-0.8
137,331	-		EX31_RS21965	0.15	-1.0
137,401	-		EX31_RS21965	0.24	-0.1
137,416	+		EX31_RS21965	0.26	+0.5
137,419	+		EX31_RS21965	0.27	-0.0
137,439	+		EX31_RS21965	0.29	-0.7
137,439	+		EX31_RS21965	0.29	+0.5
137,464	+		EX31_RS21965	0.32	+0.0
137,475	+		EX31_RS21965	0.34	+1.1
137,475	+		EX31_RS21965	0.34	+1.0
137,475	+		EX31_RS21965	0.34	+0.1
137,475	+		EX31_RS21965	0.34	-0.1
137,475	+		EX31_RS21965	0.34	+0.2
137,475	+		EX31_RS21965	0.34	-0.1
137,476	-		EX31_RS21965	0.34	-0.8
137,476	-		EX31_RS21965	0.34	-0.3
137,477	+		EX31_RS21965	0.34	-0.3
137,477	+		EX31_RS21965	0.34	+0.8
137,477	+		EX31_RS21965	0.34	+0.1
137,477	+		EX31_RS21965	0.34	-0.6
137,478	-		EX31_RS21965	0.34	-0.5
137,478	-		EX31_RS21965	0.34	+0.9
137,478	-		EX31_RS21965	0.34	-0.3
137,478	-		EX31_RS21965	0.34	-0.3
137,478	-		EX31_RS21965	0.34	-0.1
137,515	-		EX31_RS21965	0.39	-0.1
137,515	-		EX31_RS21965	0.39	-0.5
137,516	+		EX31_RS21965	0.39	-0.3
137,516	+		EX31_RS21965	0.39	+1.1
137,516	+		EX31_RS21965	0.39	+1.2
137,516	+		EX31_RS21965	0.39	-0.2
137,517	-		EX31_RS21965	0.39	-0.5
137,517	-		EX31_RS21965	0.39	-1.4
137,543	+		EX31_RS21965	0.42	-0.1
137,543	+		EX31_RS21965	0.42	+0.5
137,544	-		EX31_RS21965	0.43	-0.8
137,544	-		EX31_RS21965	0.43	+0.6
137,574	+		EX31_RS21965	0.46	+0.9
137,574	+		EX31_RS21965	0.46	+0.1
137,574	+		EX31_RS21965	0.46	+0.2
137,575	-		EX31_RS21965	0.46	-1.3
137,575	-		EX31_RS21965	0.46	-0.3
137,575	-		EX31_RS21965	0.46	-0.7
137,575	-		EX31_RS21965	0.46	-1.6
137,588	+		EX31_RS21965	0.48	+0.5
137,652	+		EX31_RS21965	0.56	-1.2
137,652	+		EX31_RS21965	0.56	-0.1
137,709	-		EX31_RS21965	0.64	+0.8
137,804	-		EX31_RS21965	0.76	-0.7
137,807	+		EX31_RS21965	0.76	+0.1
137,807	+		EX31_RS21965	0.76	+1.1
137,807	+		EX31_RS21965	0.76	+0.2
137,808	-		EX31_RS21965	0.76	-0.1
137,808	-		EX31_RS21965	0.76	-1.3
137,831	+		EX31_RS21965	0.79	-0.8
137,832	-		EX31_RS21965	0.79	+0.6
137,857	+		EX31_RS21965	0.83	+0.2
137,857	+		EX31_RS21965	0.83	-0.1
137,857	+		EX31_RS21965	0.83	-1.0
137,858	-		EX31_RS21965	0.83	-0.6
137,858	-		EX31_RS21965	0.83	-0.2
137,858	-		EX31_RS21965	0.83	+0.4
137,858	-		EX31_RS21965	0.83	+1.1
137,863	+		EX31_RS21965	0.83	-1.4
137,863	+		EX31_RS21965	0.83	-0.2
137,908	+		EX31_RS21965	0.89	+0.5
137,909	-		EX31_RS21965	0.89	-1.0
137,930	-				-1.0
137,964	+				+0.5
137,974	+				+1.5
137,974	+				+1.2
137,974	+				-0.2
137,991	+				+0.5
137,991	+				+0.6
137,991	+				+0.1
137,991	+				-0.9
137,991	+				+0.0
137,991	+				+0.1
137,992	-				+0.7
138,030	+				-1.4
138,037	+				+1.3
138,037	+				-1.3
138,037	+				-1.0
138,038	-				+0.4
138,038	-				+0.6
138,046	+				+0.1
138,069	+				-0.2
138,069	+				-1.9
138,069	+				-0.1
138,069	+				-0.7
138,069	+				-0.8
138,069	+				-1.1
138,069	+				-0.2
138,070	-				-0.5
138,070	-				+0.0
138,070	-				-0.7
138,070	-				+0.7
138,093	+				-0.5
138,097	-				+0.2
138,097	-				-2.2
138,183	+				-0.5
138,183	+				-1.9
138,183	+				+0.2
138,183	+				-0.5
138,186	+				+0.5
138,186	+				+1.3
138,186	+				+2.8
138,186	+				+0.6
138,187	-				-0.7
138,187	-				+0.8
138,187	-				-1.9
138,218	+				-0.7
138,218	+				-0.1
138,218	+				-1.0
138,219	-				-0.2
138,219	-				-0.0
138,239	+		EX31_RS21970	0.11	-0.5
138,240	-		EX31_RS21970	0.11	-0.2
138,274	+		EX31_RS21970	0.13	-1.3
138,288	+		EX31_RS21970	0.14	-0.1
138,370	+		EX31_RS21970	0.19	+0.6
138,370	+		EX31_RS21970	0.19	-1.3
138,370	+		EX31_RS21970	0.19	-0.6
138,370	+		EX31_RS21970	0.19	+0.1
138,370	+		EX31_RS21970	0.19	+1.1
138,371	-		EX31_RS21970	0.19	-1.3
138,371	-		EX31_RS21970	0.19	+0.5
138,371	-		EX31_RS21970	0.19	-1.1
138,442	+		EX31_RS21970	0.24	-0.2
138,526	-		EX31_RS21970	0.29	+0.2
138,526	-		EX31_RS21970	0.29	-0.9
138,575	+		EX31_RS21970	0.32	+0.6
138,575	+		EX31_RS21970	0.32	-0.3
138,576	-		EX31_RS21970	0.32	+1.6
138,576	-		EX31_RS21970	0.32	-0.5
138,645	+		EX31_RS21970	0.36	+0.1
138,730	+		EX31_RS21970	0.42	-0.3
138,730	+		EX31_RS21970	0.42	-0.5
138,730	+		EX31_RS21970	0.42	-0.7
138,730	+		EX31_RS21970	0.42	-1.2
138,730	+		EX31_RS21970	0.42	-0.6
138,730	+		EX31_RS21970	0.42	+1.1
138,730	+		EX31_RS21970	0.42	-1.0
138,730	+		EX31_RS21970	0.42	-0.5
138,731	-		EX31_RS21970	0.42	-0.3
138,731	-		EX31_RS21970	0.42	+0.2
138,731	-		EX31_RS21970	0.42	-1.0
138,731	-		EX31_RS21970	0.42	-0.3
138,731	-		EX31_RS21970	0.42	-0.4
138,732	+		EX31_RS21970	0.42	-0.6
138,732	+		EX31_RS21970	0.42	+1.3
138,733	-		EX31_RS21970	0.42	+0.9
138,733	-		EX31_RS21970	0.42	-0.4
138,801	+		EX31_RS21970	0.46	+0.0
138,852	+		EX31_RS21970	0.50	+0.7
138,853	-		EX31_RS21970	0.50	-2.3
138,853	-		EX31_RS21970	0.50	-0.5
138,853	-		EX31_RS21970	0.50	-1.1
138,853	-		EX31_RS21970	0.50	-0.9
138,881	-		EX31_RS21970	0.51	-1.6
138,882	+		EX31_RS21970	0.51	+0.8
138,883	-		EX31_RS21970	0.52	+0.6
138,883	-		EX31_RS21970	0.52	-0.8
138,883	-		EX31_RS21970	0.52	-0.7
138,923	-		EX31_RS21970	0.54	-0.4
138,964	+		EX31_RS21970	0.57	+0.4
139,056	+		EX31_RS21970	0.62	-0.6
139,056	+		EX31_RS21970	0.62	+0.1
139,061	+		EX31_RS21970	0.63	-0.8
139,061	+		EX31_RS21970	0.63	+0.1
139,061	+		EX31_RS21970	0.63	-0.2
139,061	+		EX31_RS21970	0.63	-0.2
139,062	-		EX31_RS21970	0.63	-0.4
139,062	-		EX31_RS21970	0.63	-0.1
139,062	-		EX31_RS21970	0.63	+0.1
139,066	-		EX31_RS21970	0.63	+0.7
139,100	+		EX31_RS21970	0.65	-1.5
139,176	+		EX31_RS21970	0.70	-0.5
139,235	+		EX31_RS21970	0.74	+0.1
139,283	-		EX31_RS21970	0.77	-0.2
139,291	+		EX31_RS21970	0.77	-1.3
139,291	+		EX31_RS21970	0.77	-0.3
139,314	-		EX31_RS21970	0.79	-0.3
139,314	-		EX31_RS21970	0.79	-1.0
139,527	+				+0.3
139,528	-				-0.0
139,591	-				-0.9
139,609	+				-0.8
139,609	+				-0.0
139,610	-				-0.9
139,610	-				+0.4
139,652	+				+0.2
139,689	+				+1.0
139,690	-				-0.3
139,690	-				-0.6
139,690	-				-0.5
139,690	-				-0.5
139,750	-				-1.9
139,750	-				-0.4
139,768	+				+0.6
139,769	-				-0.3
139,769	-				+0.1
139,769	-				-0.5
139,881	+		EX31_RS21975	0.11	-1.8
139,881	+		EX31_RS21975	0.11	-0.2
139,936	-		EX31_RS21975	0.16	-1.1
139,936	-		EX31_RS21975	0.16	-1.6
140,100	+		EX31_RS21975	0.34	+0.8
140,100	+		EX31_RS21975	0.34	-1.6
140,100	+		EX31_RS21975	0.34	-1.5
140,341	+		EX31_RS21975	0.60	+0.1
140,341	+		EX31_RS21975	0.60	-0.2
140,341	+		EX31_RS21975	0.60	-0.2
140,341	+		EX31_RS21975	0.60	-0.2
140,341	+		EX31_RS21975	0.60	-1.8
140,341	+		EX31_RS21975	0.60	-0.3
140,342	-		EX31_RS21975	0.60	-1.2
140,418	+		EX31_RS21975	0.68	-0.9
140,419	-		EX31_RS21975	0.68	+0.6
140,469	+		EX31_RS21975	0.74	+0.5
140,469	+		EX31_RS21975	0.74	+0.7
140,469	+		EX31_RS21975	0.74	-0.3
140,470	-		EX31_RS21975	0.74	-0.8
140,517	+		EX31_RS21975	0.79	-0.8
140,520	+		EX31_RS21975	0.79	-0.4