Strain Fitness in Rahnella sp. WP5 around EX31_RS15835

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
20,371	+		EX31_RS15830	0.42	+0.3
20,371	+		EX31_RS15830	0.42	+1.0
20,371	+		EX31_RS15830	0.42	-1.1
20,371	+		EX31_RS15830	0.42	-0.1
20,371	+		EX31_RS15830	0.42	-0.1
20,372	-		EX31_RS15830	0.42	-0.9
20,372	-		EX31_RS15830	0.42	+1.8
20,372	-		EX31_RS15830	0.42	+0.3
20,372	-		EX31_RS15830	0.42	-0.4
20,372	-		EX31_RS15830	0.42	-0.0
20,372	-		EX31_RS15830	0.42	+1.3
20,372	-		EX31_RS15830	0.42	+0.8
20,372	-		EX31_RS15830	0.42	+0.0
20,372	-		EX31_RS15830	0.42	+1.0
20,372	-		EX31_RS15830	0.42	-0.4
20,372	-		EX31_RS15830	0.42	-0.1
20,373	+		EX31_RS15830	0.42	-0.1
20,373	+		EX31_RS15830	0.42	-0.0
20,373	+		EX31_RS15830	0.42	+0.9
20,373	+		EX31_RS15830	0.42	+0.2
20,373	+		EX31_RS15830	0.42	+0.4
20,373	+		EX31_RS15830	0.42	-0.4
20,373	+		EX31_RS15830	0.42	-0.3
20,373	+		EX31_RS15830	0.42	+1.1
20,373	+		EX31_RS15830	0.42	-0.3
20,373	+		EX31_RS15830	0.42	-0.2
20,373	+		EX31_RS15830	0.42	-0.9
20,373	+		EX31_RS15830	0.42	+0.4
20,373	+		EX31_RS15830	0.42	-1.8
20,373	+		EX31_RS15830	0.42	-0.2
20,373	+		EX31_RS15830	0.42	+0.5
20,373	+		EX31_RS15830	0.42	+1.6
20,374	-		EX31_RS15830	0.42	-0.7
20,374	-		EX31_RS15830	0.42	+1.4
20,374	-		EX31_RS15830	0.42	-0.0
20,374	-		EX31_RS15830	0.42	-0.2
20,374	-		EX31_RS15830	0.42	+0.8
20,374	-		EX31_RS15830	0.42	+0.2
20,374	-		EX31_RS15830	0.42	+2.2
20,374	-		EX31_RS15830	0.42	-0.4
20,374	-		EX31_RS15830	0.42	+1.2
20,374	-		EX31_RS15830	0.42	-0.4
20,374	-		EX31_RS15830	0.42	+0.1
20,434	+		EX31_RS15830	0.47	-0.1
20,435	-		EX31_RS15830	0.48	+0.5
20,435	-		EX31_RS15830	0.48	+1.3
20,482	+		EX31_RS15830	0.51	-1.5
20,482	+		EX31_RS15830	0.51	-0.4
20,483	-		EX31_RS15830	0.51	+0.1
20,873	+		EX31_RS15830	0.84	-0.3
20,873	+		EX31_RS15830	0.84	+0.2
20,907	-		EX31_RS15830	0.86	+1.5
20,930	+		EX31_RS15830	0.88	+0.9
20,930	+		EX31_RS15830	0.88	-0.4
20,930	+		EX31_RS15830	0.88	+0.2
20,931	-		EX31_RS15830	0.88	-0.3
20,931	-		EX31_RS15830	0.88	+0.0
20,973	+				+0.8
20,973	+				-0.8
20,974	-				+0.3
21,014	+				-0.3
21,015	-				-0.7
21,023	+				-0.6
21,023	+				+0.9
21,023	+				+0.5
21,023	+				+0.4
21,024	-				-1.1
21,024	-				-0.0
21,024	-				-0.3
21,051	+				+1.5
21,051	+				-0.3
21,052	-				+1.0
21,052	-				+1.3
21,196	+				+1.4
21,196	+				-0.4
21,196	+				+0.3
21,197	-				+1.0
21,197	-				+1.1
21,197	-				+1.1
21,197	-				-0.6
21,230	-				+1.3
21,230	-				+0.0
21,382	-				-0.8
21,406	+				+1.4
21,406	+				+0.5
21,407	-				-0.3
21,407	-				-0.1
21,461	-		EX31_RS15835	0.11	+0.6
21,475	+		EX31_RS15835	0.12	+2.0
21,475	+		EX31_RS15835	0.12	+0.1
21,476	-		EX31_RS15835	0.12	-0.5
21,476	-		EX31_RS15835	0.12	-0.4
21,476	-		EX31_RS15835	0.12	-0.4
21,601	+		EX31_RS15835	0.21	-0.4
21,626	+		EX31_RS15835	0.23	-0.0
21,626	+		EX31_RS15835	0.23	+0.2
21,783	-		EX31_RS15835	0.34	+1.3
21,931	+		EX31_RS15835	0.45	+0.1
21,932	-		EX31_RS15835	0.45	-1.7
21,959	+		EX31_RS15835	0.47	+1.0
21,960	-		EX31_RS15835	0.47	+0.1
21,966	+		EX31_RS15835	0.47	+0.0
21,966	+		EX31_RS15835	0.47	-0.4
21,967	-		EX31_RS15835	0.47	+0.4
22,072	+		EX31_RS15835	0.55	+0.2
22,073	-		EX31_RS15835	0.55	-1.1
22,078	+		EX31_RS15835	0.55	+0.2
22,092	+		EX31_RS15835	0.56	+0.9
22,092	+		EX31_RS15835	0.56	-0.0
22,093	-		EX31_RS15835	0.56	+1.0
22,095	+		EX31_RS15835	0.56	+0.6
22,175	+		EX31_RS15835	0.62	-0.3
22,176	-		EX31_RS15835	0.62	+0.1
22,176	-		EX31_RS15835	0.62	-0.3
22,224	+		EX31_RS15835	0.66	-0.5
22,225	-		EX31_RS15835	0.66	-0.6
22,225	-		EX31_RS15835	0.66	+0.4
22,225	-		EX31_RS15835	0.66	+0.0
22,285	+		EX31_RS15835	0.70	-0.0
22,285	+		EX31_RS15835	0.70	+1.1
22,285	+		EX31_RS15835	0.70	-0.3
22,286	-		EX31_RS15835	0.70	+1.1
22,289	+		EX31_RS15835	0.70	+1.6
22,289	+		EX31_RS15835	0.70	-0.6
22,289	+		EX31_RS15835	0.70	+0.9
22,289	+		EX31_RS15835	0.70	+0.8
22,290	-		EX31_RS15835	0.70	+0.8
22,290	-		EX31_RS15835	0.70	+1.3
22,359	+		EX31_RS15835	0.75	-0.3
22,359	+		EX31_RS15835	0.75	-0.5
22,433	+		EX31_RS15835	0.81	-0.5
22,433	+		EX31_RS15835	0.81	+0.5
22,433	+		EX31_RS15835	0.81	+0.1
22,433	+		EX31_RS15835	0.81	+0.4
22,434	-		EX31_RS15835	0.81	-0.9
22,538	+		EX31_RS15835	0.88	+0.0
22,569	-				-1.0
22,659	-				+1.2
22,659	-				+1.3
22,698	+				-0.2
22,698	+				-0.0
22,698	+				+1.0
22,698	+				+1.1
22,699	-				+0.9
22,699	-				+0.3
22,711	+				-0.4
22,711	+				+0.6
22,711	+				-0.5
22,711	+				+0.5
22,712	-				-0.1
22,712	-				+0.0
22,712	-				+0.2
22,712	-				-0.6
22,712	-				-0.8
22,712	-				+1.4
22,808	+				+0.2
22,862	+				+0.0
22,891	+				-1.7
22,891	+				-0.6
22,892	-				-0.8
22,892	-				-0.3
22,892	-				+1.4
22,920	+				+0.5
22,920	+				+1.6
22,920	+				+0.9
22,920	+				+1.0
22,920	+				+0.1
22,920	+				-0.2
22,920	+				-0.1
22,920	+				+0.7
22,920	+				-0.5
22,921	-				-0.3
22,921	-				-1.2
22,921	-				-0.9
22,921	-				-1.1
22,921	-				+0.7
22,927	+				-0.9
22,928	-				+1.4
22,930	+				-0.6
22,930	+				+0.0
22,930	+				+0.2
22,930	+				-0.3
22,930	+				-0.4
22,930	+				-0.0
22,931	-				-0.1
22,931	-				+1.7
22,977	-				-0.5
22,977	-				+0.1
22,977	-				-0.0
22,986	+				-0.3
23,015	+				+0.3
23,015	+				-0.3
23,015	+				-0.1
23,016	-				-0.1
23,016	-				+1.5
23,016	-				-0.5
23,016	-				+1.6
23,016	-				-1.2
23,016	-				+0.1
23,016	-				+0.2
23,113	+		EX31_RS15840	0.15	-0.3
23,113	+		EX31_RS15840	0.15	-0.3
23,113	+		EX31_RS15840	0.15	-1.0
23,113	+		EX31_RS15840	0.15	-0.2
23,220	-		EX31_RS15840	0.22	-0.5
23,234	+		EX31_RS15840	0.22	+1.1
23,235	-		EX31_RS15840	0.22	-0.2
23,266	+		EX31_RS15840	0.24	-0.6
23,266	+		EX31_RS15840	0.24	+0.7
23,266	+		EX31_RS15840	0.24	+0.4
23,267	-		EX31_RS15840	0.24	+0.2
23,267	-		EX31_RS15840	0.24	+1.0
23,332	+		EX31_RS15840	0.28	+0.1
23,333	-		EX31_RS15840	0.28	+0.5
23,339	+		EX31_RS15840	0.29	+0.1
23,340	-		EX31_RS15840	0.29	+0.4
23,423	+		EX31_RS15840	0.34	+1.3
23,423	+		EX31_RS15840	0.34	-0.8
23,424	-		EX31_RS15840	0.34	-1.6
23,426	+		EX31_RS15840	0.34	+0.1
23,426	+		EX31_RS15840	0.34	+0.1
23,426	+		EX31_RS15840	0.34	-0.4
23,426	+		EX31_RS15840	0.34	-0.1
23,426	+		EX31_RS15840	0.34	-0.6
23,426	+		EX31_RS15840	0.34	-0.8
23,426	+		EX31_RS15840	0.34	+1.0
23,427	-		EX31_RS15840	0.34	+1.8
23,427	-		EX31_RS15840	0.34	+0.3
23,427	-		EX31_RS15840	0.34	-0.2
23,444	+		EX31_RS15840	0.35	-0.3
23,444	+		EX31_RS15840	0.35	+0.9
23,476	+		EX31_RS15840	0.37	-0.7
23,518	+		EX31_RS15840	0.39	-0.2
23,518	+		EX31_RS15840	0.39	-0.8
23,519	-		EX31_RS15840	0.39	-0.2
23,519	-		EX31_RS15840	0.39	-0.2
23,519	-		EX31_RS15840	0.39	-0.2
23,519	-		EX31_RS15840	0.39	+1.0
23,519	-		EX31_RS15840	0.39	+0.6
23,609	+		EX31_RS15840	0.45	+0.8
23,609	+		EX31_RS15840	0.45	-0.7