Strain Fitness in Rahnella sp. WP5 around EX31_RS14985

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
7,962	+		EX31_RS14980	0.69	-0.1
7,962	+		EX31_RS14980	0.69	-0.1
7,962	+		EX31_RS14980	0.69	+0.1
7,962	+		EX31_RS14980	0.69	-0.2
7,962	+		EX31_RS14980	0.69	+0.5
7,962	+		EX31_RS14980	0.69	+0.3
7,962	+		EX31_RS14980	0.69	-0.2
7,962	+		EX31_RS14980	0.69	-0.6
7,962	+		EX31_RS14980	0.69	+0.4
7,963	-		EX31_RS14980	0.69	+0.0
7,963	-		EX31_RS14980	0.69	-0.2
7,963	-		EX31_RS14980	0.69	+1.4
7,963	-		EX31_RS14980	0.69	-0.1
7,963	-		EX31_RS14980	0.69	-0.6
7,983	+		EX31_RS14980	0.70	+0.9
7,984	-		EX31_RS14980	0.70	-0.1
7,984	-		EX31_RS14980	0.70	+0.4
7,984	-		EX31_RS14980	0.70	-0.2
7,984	-		EX31_RS14980	0.70	-0.3
8,018	+		EX31_RS14980	0.72	-0.7
8,018	+		EX31_RS14980	0.72	+0.9
8,019	-		EX31_RS14980	0.72	-0.4
8,085	+		EX31_RS14980	0.77	+0.3
8,086	-		EX31_RS14980	0.77	+0.0
8,086	-		EX31_RS14980	0.77	-0.2
8,144	+		EX31_RS14980	0.81	-0.7
8,144	+		EX31_RS14980	0.81	+1.5
8,145	-		EX31_RS14980	0.81	+1.2
8,221	-		EX31_RS14980	0.86	-0.5
8,267	+		EX31_RS14980	0.89	+0.2
8,421	-				+0.0
8,422	+				+0.0
8,422	+				-0.1
8,422	+				+0.9
8,422	+				+0.3
8,422	+				+0.9
8,422	+				-0.7
8,422	+				+0.3
8,423	-				+0.3
8,423	-				+0.6
8,423	-				-0.7
8,423	-				+0.3
8,423	-				-0.2
8,423	-				+0.7
8,423	-				-0.1
8,423	-				-0.0
8,424	+				+2.3
8,424	+				-0.2
8,424	+				+0.6
8,424	+				-0.1
8,424	+				+0.5
8,424	+				+0.5
8,424	+				+1.2
8,424	+				+0.7
8,424	+				+1.2
8,424	+				+1.9
8,424	+				-0.6
8,424	+				-0.0
8,424	+				+1.6
8,424	+				+0.5
8,424	+				-0.1
8,424	+				+0.3
8,424	+				-0.3
8,424	+				+1.3
8,425	-				+1.5
8,425	-				+0.9
8,425	-				-0.2
8,425	-				+2.3
8,425	-				-0.4
8,425	-				+0.0
8,425	-				+0.7
8,425	-				+0.4
8,425	-				+1.7
8,425	-				+0.1
8,425	-				-0.2
8,425	-				-0.4
8,425	-				-0.2
8,425	-				-0.5
8,425	-				+1.3
8,425	-				-0.3
8,425	-				+0.4
8,425	-				+0.2
8,425	-				+0.0
8,456	+				-0.2
8,456	+				+0.7
8,524	+				-0.4
8,524	+				-0.1
8,540	+				-0.2
8,541	-				-0.1
8,560	+				+1.7
8,560	+				-0.6
8,560	+				-0.2
8,560	+				+0.2
8,561	-				-0.3
8,561	-				-0.4
8,561	-				+1.3
8,599	+				+0.3
8,599	+				+0.8
8,599	+				+0.1
8,599	+				+0.5
8,599	+				-0.4
8,599	+				+0.6
8,599	+				-0.5
8,600	-				+0.5
8,600	-				-0.3
8,600	-				-0.2
8,600	-				-0.2
8,600	-				-1.8
8,614	+				+0.7
8,614	+				+0.2
8,646	+				+2.0
8,647	-				+0.1
8,647	-				+0.0
8,676	+				+0.4
8,676	+				+1.1
8,676	+				+0.2
8,691	+				-0.2
8,701	+				+0.3
8,709	+				-0.3
8,724	-				-0.9
8,775	+				-0.2
8,775	+				-0.2
8,776	-				+0.3
8,786	-				+0.3
8,796	-				+0.0
8,796	-				-0.7
8,834	+				+0.3
8,835	-				+1.2
8,835	-				-0.6
8,932	+		EX31_RS14985	0.10	+1.2
8,932	+		EX31_RS14985	0.10	+0.0
8,932	+		EX31_RS14985	0.10	+0.1
8,932	+		EX31_RS14985	0.10	-1.1
8,933	-		EX31_RS14985	0.10	+1.1
8,933	-		EX31_RS14985	0.10	+1.1
8,933	-		EX31_RS14985	0.10	-0.5
8,933	-		EX31_RS14985	0.10	-0.3
8,933	-		EX31_RS14985	0.10	-0.8
8,933	-		EX31_RS14985	0.10	-0.3
8,936	+		EX31_RS14985	0.10	+1.5
8,936	+		EX31_RS14985	0.10	+1.4
8,936	+		EX31_RS14985	0.10	+0.3
8,936	+		EX31_RS14985	0.10	+0.5
8,937	-		EX31_RS14985	0.10	+0.9
8,937	-		EX31_RS14985	0.10	-0.2
8,959	+		EX31_RS14985	0.12	-0.8
8,959	+		EX31_RS14985	0.12	+1.0
8,960	-		EX31_RS14985	0.12	+0.2
8,960	-		EX31_RS14985	0.12	+0.2
9,050	+		EX31_RS14985	0.20	-1.5
9,051	-		EX31_RS14985	0.20	-0.3
9,051	-		EX31_RS14985	0.20	-0.8
9,081	-		EX31_RS14985	0.22	+0.2
9,129	+		EX31_RS14985	0.26	+0.4
9,160	+		EX31_RS14985	0.28	+0.1
9,161	-		EX31_RS14985	0.28	+0.3
9,161	-		EX31_RS14985	0.28	-0.5
9,246	+		EX31_RS14985	0.35	-0.2
9,265	+		EX31_RS14985	0.37	-0.2
9,265	+		EX31_RS14985	0.37	+0.2
9,265	+		EX31_RS14985	0.37	+0.2
9,265	+		EX31_RS14985	0.37	+0.2
9,265	+		EX31_RS14985	0.37	+0.5
9,265	+		EX31_RS14985	0.37	-0.2
9,265	+		EX31_RS14985	0.37	+0.3
9,265	+		EX31_RS14985	0.37	-0.5
9,265	+		EX31_RS14985	0.37	+0.0
9,265	+		EX31_RS14985	0.37	+1.7
9,265	+		EX31_RS14985	0.37	-0.3
9,265	+		EX31_RS14985	0.37	+0.2
9,265	+		EX31_RS14985	0.37	+1.5
9,265	+		EX31_RS14985	0.37	-0.0
9,265	+		EX31_RS14985	0.37	+1.3
9,265	+		EX31_RS14985	0.37	+0.8
9,265	+		EX31_RS14985	0.37	+1.2
9,265	+		EX31_RS14985	0.37	+0.0
9,265	+		EX31_RS14985	0.37	+0.8
9,265	+		EX31_RS14985	0.37	+0.3
9,265	+		EX31_RS14985	0.37	+1.2
9,266	-		EX31_RS14985	0.37	-0.2
9,266	-		EX31_RS14985	0.37	-0.4
9,266	-		EX31_RS14985	0.37	-0.2
9,266	-		EX31_RS14985	0.37	-0.1
9,266	-		EX31_RS14985	0.37	-0.1
9,266	-		EX31_RS14985	0.37	+1.9
9,266	-		EX31_RS14985	0.37	-0.3
9,266	-		EX31_RS14985	0.37	-0.3
9,266	-		EX31_RS14985	0.37	+0.3
9,266	-		EX31_RS14985	0.37	+1.2
9,266	-		EX31_RS14985	0.37	+0.0
9,266	-		EX31_RS14985	0.37	-0.1
9,266	-		EX31_RS14985	0.37	+0.1
9,267	+		EX31_RS14985	0.37	+0.3
9,267	+		EX31_RS14985	0.37	+0.7
9,267	+		EX31_RS14985	0.37	-0.9
9,267	+		EX31_RS14985	0.37	-0.0
9,267	+		EX31_RS14985	0.37	+0.4
9,267	+		EX31_RS14985	0.37	+0.1
9,267	+		EX31_RS14985	0.37	+0.6
9,267	+		EX31_RS14985	0.37	-0.5
9,267	+		EX31_RS14985	0.37	+0.5
9,268	-		EX31_RS14985	0.37	+0.8
9,268	-		EX31_RS14985	0.37	+0.0
9,268	-		EX31_RS14985	0.37	-0.2
9,268	-		EX31_RS14985	0.37	-0.5
9,268	-		EX31_RS14985	0.37	-0.4
9,442	+		EX31_RS14985	0.51	-0.4
9,442	+		EX31_RS14985	0.51	-0.8
9,442	+		EX31_RS14985	0.51	-0.8
9,442	+		EX31_RS14985	0.51	-0.6
9,442	+		EX31_RS14985	0.51	+0.2
9,442	+		EX31_RS14985	0.51	+0.0
9,442	+		EX31_RS14985	0.51	+1.2
9,442	+		EX31_RS14985	0.51	-0.2
9,442	+		EX31_RS14985	0.51	-0.4
9,442	+		EX31_RS14985	0.51	-0.5
9,443	-		EX31_RS14985	0.51	-0.2
9,443	-		EX31_RS14985	0.51	-0.3
9,443	-		EX31_RS14985	0.51	-0.1
9,443	-		EX31_RS14985	0.51	-0.3
9,443	-		EX31_RS14985	0.51	-0.2
9,443	-		EX31_RS14985	0.51	+0.5
9,443	-		EX31_RS14985	0.51	-0.8
9,443	-		EX31_RS14985	0.51	+0.3
9,443	-		EX31_RS14985	0.51	-0.4
9,443	-		EX31_RS14985	0.51	-1.1
9,443	-		EX31_RS14985	0.51	+0.6
9,446	+		EX31_RS14985	0.51	+1.8
9,446	+		EX31_RS14985	0.51	+0.3
9,446	+		EX31_RS14985	0.51	+0.3
9,446	+		EX31_RS14985	0.51	-0.2
9,446	+		EX31_RS14985	0.51	-1.6
9,446	+		EX31_RS14985	0.51	-0.7
9,446	+		EX31_RS14985	0.51	-0.6
9,446	+		EX31_RS14985	0.51	+0.2
9,446	+		EX31_RS14985	0.51	+0.1
9,446	+		EX31_RS14985	0.51	+0.7
9,446	+		EX31_RS14985	0.51	+0.1
9,446	+		EX31_RS14985	0.51	+0.2
9,446	+		EX31_RS14985	0.51	+1.4
9,446	+		EX31_RS14985	0.51	+0.5
9,446	+		EX31_RS14985	0.51	-0.4
9,446	+		EX31_RS14985	0.51	+0.3
9,447	-		EX31_RS14985	0.52	-0.8
9,447	-		EX31_RS14985	0.52	-0.3
9,447	-		EX31_RS14985	0.52	-0.0
9,447	-		EX31_RS14985	0.52	-0.8
9,447	-		EX31_RS14985	0.52	-0.0
9,447	-		EX31_RS14985	0.52	-0.4
9,447	-		EX31_RS14985	0.52	-0.1
9,447	-		EX31_RS14985	0.52	+0.6
9,447	-		EX31_RS14985	0.52	-0.3
9,447	-		EX31_RS14985	0.52	+0.0
9,447	-		EX31_RS14985	0.52	+0.2
9,447	-		EX31_RS14985	0.52	+1.1
9,447	-		EX31_RS14985	0.52	-0.3
9,447	-		EX31_RS14985	0.52	-0.7
9,447	-		EX31_RS14985	0.52	-0.4
9,447	-		EX31_RS14985	0.52	+0.1
9,447	-		EX31_RS14985	0.52	+1.7
9,447	-		EX31_RS14985	0.52	+0.2
9,447	-		EX31_RS14985	0.52	-1.0
9,447	-		EX31_RS14985	0.52	+0.2
9,447	-		EX31_RS14985	0.52	+0.1
9,447	-		EX31_RS14985	0.52	+0.2
9,447	-		EX31_RS14985	0.52	-0.6
9,447	-		EX31_RS14985	0.52	+0.4
9,447	-		EX31_RS14985	0.52	-0.3
9,447	-		EX31_RS14985	0.52	+0.4
9,447	-		EX31_RS14985	0.52	-0.8
9,447	-		EX31_RS14985	0.52	+0.3
9,450	+		EX31_RS14985	0.52	+0.1
9,451	-		EX31_RS14985	0.52	+0.0
9,451	-		EX31_RS14985	0.52	+0.7
9,477	-		EX31_RS14985	0.54	-0.8
9,548	+		EX31_RS14985	0.60	-0.5
9,549	-		EX31_RS14985	0.60	+1.6
9,549	-		EX31_RS14985	0.60	-0.2
9,549	-		EX31_RS14985	0.60	-0.4
9,549	-		EX31_RS14985	0.60	-1.0
9,549	-		EX31_RS14985	0.60	+0.3
9,559	+		EX31_RS14985	0.61	-0.3
9,568	+		EX31_RS14985	0.61	+0.1
9,568	+		EX31_RS14985	0.61	-0.5
9,574	-		EX31_RS14985	0.62	-0.2
9,574	-		EX31_RS14985	0.62	+0.2
9,574	-		EX31_RS14985	0.62	+1.4
9,591	-		EX31_RS14985	0.63	+1.7
9,591	-		EX31_RS14985	0.63	-0.4
9,635	+		EX31_RS14985	0.67	+1.0
9,635	+		EX31_RS14985	0.67	+0.0
9,635	+		EX31_RS14985	0.67	+1.7
9,635	+		EX31_RS14985	0.67	-0.5
9,636	-		EX31_RS14985	0.67	+0.1
9,636	-		EX31_RS14985	0.67	+1.1
9,647	+		EX31_RS14985	0.68	-0.2
9,647	+		EX31_RS14985	0.68	+0.9
9,743	+		EX31_RS14985	0.75	-0.3
9,800	+		EX31_RS14985	0.80	-0.6
9,801	-		EX31_RS14985	0.80	+0.4
9,831	+		EX31_RS14985	0.83	+1.0
9,879	+		EX31_RS14985	0.86	-0.2
9,879	+		EX31_RS14985	0.86	-0.1
9,879	+		EX31_RS14985	0.86	+0.6
9,879	+		EX31_RS14985	0.86	-0.8
9,879	+		EX31_RS14985	0.86	+0.1
9,879	+		EX31_RS14985	0.86	+0.2
9,879	+		EX31_RS14985	0.86	+0.4
9,879	+		EX31_RS14985	0.86	-0.9
9,879	+		EX31_RS14985	0.86	+0.1
9,879	+		EX31_RS14985	0.86	-0.2
9,879	+		EX31_RS14985	0.86	+2.0
9,880	-		EX31_RS14985	0.87	+0.4
9,880	-		EX31_RS14985	0.87	-0.3
9,880	-		EX31_RS14985	0.87	+1.0
9,880	-		EX31_RS14985	0.87	-0.6
9,880	-		EX31_RS14985	0.87	-0.2
9,880	-		EX31_RS14985	0.87	+2.4
9,880	-		EX31_RS14985	0.87	+0.1
9,880	-		EX31_RS14985	0.87	+0.6
9,880	-		EX31_RS14985	0.87	+0.4
9,880	-		EX31_RS14985	0.87	-0.2
9,880	-		EX31_RS14985	0.87	-0.3
9,880	-		EX31_RS14985	0.87	-0.5
9,880	-		EX31_RS14985	0.87	+0.0
9,880	-		EX31_RS14985	0.87	-0.3
9,906	+		EX31_RS14985	0.89	+0.2
9,906	+		EX31_RS14985	0.89	+1.2
9,907	-		EX31_RS14985	0.89	+0.5
9,907	-		EX31_RS14985	0.89	-0.7
9,907	-		EX31_RS14985	0.89	+1.9
9,907	-		EX31_RS14985	0.89	+3.7
10,009	+				-0.0
10,089	+				+2.0
10,116	-				-1.3
10,125	-				-1.1
10,158	-				+0.4
10,198	+		EX31_RS25375	0.19	+0.3
10,199	-		EX31_RS25375	0.20	-1.9
10,199	-		EX31_RS25375	0.20	-1.4
10,233	-		EX31_RS25375	0.53	-2.4
10,233	-		EX31_RS25375	0.53	-1.3
10,275	+				-0.2
10,275	+				-0.0
10,275	+				-0.2
10,279	-				-1.6
10,389	-				-0.9
10,389	-				-2.0
10,448	-				-1.2
10,450	+				-0.6
10,450	+				+0.6
10,450	+				-0.7
10,450	+				-1.3
10,451	-				-1.9
10,451	-				-0.8
10,451	-				-3.3
10,451	-				-2.1
10,474	+				-1.4
10,474	+				-1.1
10,474	+				-1.2
10,474	+				-1.0
10,475	-				-1.4
10,475	-				-3.1
10,475	-				-1.9
10,475	-				-1.2
10,475	-				-1.7
10,478	+				-0.3
10,478	+				-1.6
10,478	+				-0.1
10,478	+				+1.0
10,478	+				-0.8
10,478	+				-0.2
10,478	+				-1.7
10,478	+				-0.5
10,478	+				-1.7
10,479	-				-0.5
10,479	-				-0.2
10,479	-				-2.0
10,479	-				-3.4
10,479	-				-1.9
10,479	-				-2.1
10,479	-				-2.2
10,479	-				-2.9
10,479	-				-1.9
10,483	+				-1.2
10,483	+				-0.1
10,483	+				-2.5
10,483	+				-0.6
10,483	+				-0.6
10,484	-				-1.3
10,484	-				-2.1
10,518	+				-1.7
10,518	+				-0.7
10,518	+				-1.8
10,519	-				-1.0
10,519	-				-0.0
10,519	-				-2.4
10,519	-				-0.6
10,519	-				-1.3
10,530	+				-2.0
10,530	+				-1.3
10,530	+				+0.2
10,530	+				-2.0
10,530	+				-0.7
10,530	+				-1.8
10,530	+				-0.9
10,531	-				-0.4
10,531	-				-2.8
10,531	-				-2.2
10,531	-				-2.8
10,531	-				-2.6
10,531	-				-2.6
10,531	-				-2.3
10,531	-				-0.6
10,531	-				-2.7
10,629	-		EX31_RS14990	0.12	-2.8
10,688	-		EX31_RS14990	0.16	-2.6
10,688	-		EX31_RS14990	0.16	-1.4
10,771	+		EX31_RS14990	0.21	-0.2
10,771	+		EX31_RS14990	0.21	+0.4
10,771	+		EX31_RS14990	0.21	-0.0
10,772	-		EX31_RS14990	0.21	-2.5
10,772	-		EX31_RS14990	0.21	-1.8
10,907	+		EX31_RS14990	0.29	-0.9
10,907	+		EX31_RS14990	0.29	-1.4
10,908	-		EX31_RS14990	0.29	-2.6
10,908	-		EX31_RS14990	0.29	-2.0
10,930	+		EX31_RS14990	0.30	-1.0
10,931	-		EX31_RS14990	0.31	-1.3
10,984	+		EX31_RS14990	0.34	-1.5
10,984	+		EX31_RS14990	0.34	-0.5
10,984	+		EX31_RS14990	0.34	-1.0
10,984	+		EX31_RS14990	0.34	-0.4
10,985	-		EX31_RS14990	0.34	-0.6
10,985	-		EX31_RS14990	0.34	-1.0
10,985	-		EX31_RS14990	0.34	-1.3
10,985	-		EX31_RS14990	0.34	-1.3
11,032	-		EX31_RS14990	0.37	-3.1
11,032	-		EX31_RS14990	0.37	-2.8