Strain Fitness in Rahnella sp. WP5 around EX31_RS13120

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
49,186	+				+0.2
49,195	+				-0.7
49,195	+				+0.9
49,196	-				-0.6
49,245	-				-0.4
49,258	+				+1.0
49,258	+				+0.6
49,258	+				-0.5
49,258	+				-0.7
49,258	+				+1.1
49,258	+				+0.7
49,258	+				+0.4
49,259	-				+0.2
49,259	-				+1.8
49,259	-				-0.8
49,259	-				+0.0
49,259	-				-0.3
49,267	+				-0.3
49,267	+				-0.5
49,267	+				-0.7
49,267	+				-0.3
49,268	-				-0.2
49,268	-				-1.0
49,275	-				+0.3
49,310	-				+0.2
49,316	+				-1.5
49,339	-				-0.3
49,340	+				-0.1
49,341	-				-0.3
49,341	-				+0.4
49,360	+				-0.1
49,361	-				-0.2
49,361	-				-0.4
49,361	-				+0.4
49,374	+				-1.2
49,374	+				+0.1
49,374	+				-0.3
49,374	+				-2.7
49,374	+				-0.1
49,374	+				+1.2
49,375	-				+0.6
49,375	-				+0.0
49,375	-				+1.0
49,409	+				-0.1
49,409	+				-0.5
49,409	+				-0.3
49,410	-				+0.5
49,417	+				-0.5
49,417	+				-0.4
49,417	+				+0.0
49,433	+				-0.4
49,433	+				+0.0
49,490	+				+0.2
49,490	+				-0.4
49,522	+				+0.7
49,522	+				-0.0
49,522	+				-0.2
49,522	+				+0.8
49,522	+				-0.2
49,522	+				-0.3
49,522	+				+0.9
49,523	-				-0.1
49,523	-				-0.5
49,527	+				+0.4
49,528	-				-2.2
49,597	+				+0.9
49,598	-				+0.4
49,598	-				+1.0
49,606	+				+1.9
49,606	+				+0.8
49,607	-				+0.8
49,607	-				-0.2
49,641	+				+0.9
49,642	-				-0.3
49,642	-				+0.4
49,642	-				-1.2
49,706	-				-0.2
49,778	-		EX31_RS13115	0.16	+0.2
49,778	-		EX31_RS13115	0.16	-1.1
49,792	+		EX31_RS13115	0.23	-1.0
49,792	+		EX31_RS13115	0.23	-0.5
49,793	-		EX31_RS13115	0.23	-0.1
49,793	-		EX31_RS13115	0.23	+0.4
49,801	-		EX31_RS13115	0.27	+0.8
49,812	+		EX31_RS13115	0.32	-1.5
49,812	+		EX31_RS13115	0.32	-1.0
49,812	+		EX31_RS13115	0.32	+0.1
49,813	-		EX31_RS13115	0.32	+2.0
49,813	-		EX31_RS13115	0.32	-0.7
49,813	-		EX31_RS13115	0.32	+0.5
49,813	-		EX31_RS13115	0.32	+0.2
49,828	+		EX31_RS13115	0.39	-0.5
49,843	+		EX31_RS13115	0.45	-0.1
49,843	+		EX31_RS13115	0.45	+0.1
49,843	+		EX31_RS13115	0.45	-0.2
49,844	-		EX31_RS13115	0.46	-0.4
49,882	+		EX31_RS13115	0.63	+0.4
49,882	+		EX31_RS13115	0.63	-1.0
49,882	+		EX31_RS13115	0.63	+0.2
49,883	-		EX31_RS13115	0.64	-0.3
49,883	-		EX31_RS13115	0.64	+0.5
49,893	+		EX31_RS13115	0.68	-0.2
49,893	+		EX31_RS13115	0.68	+0.8
49,893	+		EX31_RS13115	0.68	-0.7
49,893	+		EX31_RS13115	0.68	-0.3
49,893	+		EX31_RS13115	0.68	+0.8
49,893	+		EX31_RS13115	0.68	-0.4
49,893	+		EX31_RS13115	0.68	-0.2
49,893	+		EX31_RS13115	0.68	+0.8
49,894	-		EX31_RS13115	0.68	+1.0
49,894	-		EX31_RS13115	0.68	-0.4
49,894	-		EX31_RS13115	0.68	+1.0
49,894	-		EX31_RS13115	0.68	+1.2
49,894	-		EX31_RS13115	0.68	+0.8
49,894	-		EX31_RS13115	0.68	-0.2
49,894	-		EX31_RS13115	0.68	-1.0
49,966	+				-0.4
49,966	+				-1.3
49,966	+				-0.4
49,966	+				-0.8
49,966	+				-1.5
49,967	-				+1.2
49,982	+				+0.1
49,983	-				+0.5
49,983	-				+0.3
49,983	-				+0.1
49,983	-				-0.4
49,983	-				+0.7
49,985	+				-0.0
49,985	+				+0.0
49,985	+				-0.6
49,985	+				-0.7
49,985	+				+1.1
49,985	+				+1.2
49,986	-				-0.2
49,986	-				+0.1
50,016	+				+1.0
50,017	-				-0.2
50,017	-				-0.5
50,025	+				-0.1
50,025	+				-2.1
50,026	-				-1.8
50,026	-				-0.1
50,026	-				+0.5
50,034	+				-0.4
50,044	+				+0.6
50,071	-				+0.3
50,089	+				-1.1
50,103	+				-0.9
50,104	-				+0.2
50,109	+				+1.6
50,109	+				-0.3
50,109	+				-0.4
50,110	-				+1.0
50,118	-				-1.0
50,118	-				+0.3
50,150	+				-0.2
50,150	+				+0.2
50,215	-				+0.6
50,215	-				-0.1
50,269	+				-0.7
50,314	-		EX31_RS13120	0.14	-0.4
50,339	+		EX31_RS13120	0.16	+0.1
50,339	+		EX31_RS13120	0.16	+0.2
50,340	-		EX31_RS13120	0.16	+0.4
50,340	-		EX31_RS13120	0.16	-0.2
50,340	-		EX31_RS13120	0.16	+0.9
50,340	-		EX31_RS13120	0.16	-0.5
50,340	-		EX31_RS13120	0.16	-0.9
50,343	+		EX31_RS13120	0.16	-0.3
50,343	+		EX31_RS13120	0.16	-0.9
50,344	-		EX31_RS13120	0.16	+0.2
50,344	-		EX31_RS13120	0.16	+1.3
50,344	-		EX31_RS13120	0.16	+0.0
50,344	-		EX31_RS13120	0.16	-0.6
50,399	+		EX31_RS13120	0.21	-0.1
50,399	+		EX31_RS13120	0.21	+0.9
50,431	+		EX31_RS13120	0.23	+0.3
50,431	+		EX31_RS13120	0.23	-1.5
50,431	+		EX31_RS13120	0.23	-0.2
50,487	-		EX31_RS13120	0.28	+0.9
50,487	-		EX31_RS13120	0.28	-0.0
50,597	+		EX31_RS13120	0.37	-0.5
50,686	+		EX31_RS13120	0.44	-0.7
50,686	+		EX31_RS13120	0.44	-0.7
50,686	+		EX31_RS13120	0.44	-0.4
50,686	+		EX31_RS13120	0.44	-0.1
50,686	+		EX31_RS13120	0.44	-0.7
50,686	+		EX31_RS13120	0.44	-0.0
50,686	+		EX31_RS13120	0.44	-0.4
50,687	-		EX31_RS13120	0.44	-1.3
50,687	-		EX31_RS13120	0.44	+1.1
50,687	-		EX31_RS13120	0.44	-0.5
50,796	+		EX31_RS13120	0.53	+0.1
50,797	-		EX31_RS13120	0.54	-0.1
50,797	-		EX31_RS13120	0.54	-1.0
50,797	-		EX31_RS13120	0.54	+0.3
50,797	-		EX31_RS13120	0.54	+0.1
50,813	+		EX31_RS13120	0.55	-1.3
50,814	-		EX31_RS13120	0.55	+0.6
50,814	-		EX31_RS13120	0.55	-0.9
50,847	+		EX31_RS13120	0.58	-0.4
50,847	+		EX31_RS13120	0.58	+0.1
50,848	-		EX31_RS13120	0.58	-0.3
50,863	+		EX31_RS13120	0.59	+0.1
50,863	+		EX31_RS13120	0.59	+1.1
50,864	-		EX31_RS13120	0.59	+0.4
50,874	-		EX31_RS13120	0.60	-0.1
50,930	+		EX31_RS13120	0.65	+0.4
50,930	+		EX31_RS13120	0.65	-0.5
50,930	+		EX31_RS13120	0.65	-0.8
50,930	+		EX31_RS13120	0.65	-0.1
50,931	-		EX31_RS13120	0.65	-1.5
51,025	+		EX31_RS13120	0.72	+0.6
51,026	-		EX31_RS13120	0.73	-0.5
51,026	-		EX31_RS13120	0.73	-0.3
51,048	+		EX31_RS13120	0.74	+1.1
51,048	+		EX31_RS13120	0.74	-0.6
51,048	+		EX31_RS13120	0.74	-0.5
51,049	-		EX31_RS13120	0.74	+0.1
51,049	-		EX31_RS13120	0.74	-1.1
51,050	+		EX31_RS13120	0.75	+0.3
51,050	+		EX31_RS13120	0.75	-0.7
51,050	+		EX31_RS13120	0.75	+0.0
51,051	-		EX31_RS13120	0.75	+0.7
51,051	-		EX31_RS13120	0.75	+0.8
51,087	-		EX31_RS13120	0.78	-0.3
51,157	+		EX31_RS13120	0.83	-1.1
51,157	+		EX31_RS13120	0.83	+0.1
51,157	+		EX31_RS13120	0.83	-0.4
51,157	+		EX31_RS13120	0.83	-0.6
51,157	+		EX31_RS13120	0.83	+0.8
51,158	-		EX31_RS13120	0.83	-0.5
51,158	-		EX31_RS13120	0.83	-0.5
51,158	-		EX31_RS13120	0.83	-0.4
51,265	+				-1.4
51,285	+				+0.0
51,285	+				-0.1
51,285	+				+0.9
51,286	-				-0.5
51,286	-				+0.4
51,287	+				-1.0
51,287	+				+0.5
51,287	+				+0.7
51,287	+				-1.9
51,287	+				-0.7
51,287	+				-0.1
51,287	+				-1.0
51,287	+				-0.2
51,288	-				-0.1
51,288	-				-0.8
51,288	-				+0.9
51,288	-				-2.4
51,291	-				-0.9
51,291	-				+0.4
51,305	+				-0.4
51,307	+				+0.4
51,307	+				+1.2
51,307	+				+0.6
51,307	+				-0.6
51,307	+				+0.1
51,307	+				+0.1
51,307	+				-0.5
51,307	+				+0.8
51,307	+				-0.4
51,307	+				+0.1
51,308	-				+0.0
51,308	-				-0.8
51,308	-				-0.4
51,308	-				-0.6
51,308	-				-0.5
51,308	-				+0.8
51,308	-				-0.3
51,308	-				+1.0
51,325	+				-0.6
51,330	+				+0.5
51,330	+				-0.5
51,331	-				+0.2
51,331	-				-0.1
51,331	-				+0.1
51,355	-				-0.6
51,374	-				-1.4
51,374	-				-0.7
51,374	-				-1.0
51,374	-				-0.5
51,474	+		EX31_RS13125	0.22	+0.3
51,474	+		EX31_RS13125	0.22	-0.1
51,474	+		EX31_RS13125	0.22	-0.3
51,475	-		EX31_RS13125	0.23	+1.4
51,508	+		EX31_RS13125	0.30	-0.9
51,509	-		EX31_RS13125	0.30	+1.0
51,602	+		EX31_RS13125	0.52	+0.0
51,603	-		EX31_RS13125	0.52	-0.9
51,629	-		EX31_RS13125	0.58	-0.3
51,648	+		EX31_RS13125	0.62	+0.1
51,649	-		EX31_RS13125	0.63	-0.1
51,717	+		EX31_RS13125	0.78	-0.6
51,718	-		EX31_RS13125	0.78	+0.1
51,718	-		EX31_RS13125	0.78	-0.6
51,718	-		EX31_RS13125	0.78	+0.5
51,718	-		EX31_RS13125	0.78	-0.3
51,718	-		EX31_RS13125	0.78	+0.5
51,718	-		EX31_RS13125	0.78	+1.0
51,718	-		EX31_RS13125	0.78	-0.4
51,742	+		EX31_RS13125	0.84	-0.1
51,829	-				+0.4
51,847	+				-0.9
51,847	+				+0.5
51,847	+				+0.8
51,857	-				-1.3
51,958	+		EX31_RS13130	0.19	-0.0
51,958	+		EX31_RS13130	0.19	-1.5
51,958	+		EX31_RS13130	0.19	-2.3
51,959	-		EX31_RS13130	0.20	+1.2
51,959	-		EX31_RS13130	0.20	+0.0
51,959	-		EX31_RS13130	0.20	+0.6
51,980	+		EX31_RS13130	0.22	-0.3
51,980	+		EX31_RS13130	0.22	+1.7
51,981	-		EX31_RS13130	0.22	-0.9
51,981	-		EX31_RS13130	0.22	-0.4
52,023	+		EX31_RS13130	0.27	-1.2
52,023	+		EX31_RS13130	0.27	-0.6
52,023	+		EX31_RS13130	0.27	-0.3
52,023	+		EX31_RS13130	0.27	+0.4
52,023	+		EX31_RS13130	0.27	-0.2
52,023	+		EX31_RS13130	0.27	-0.5
52,023	+		EX31_RS13130	0.27	-1.5
52,024	-		EX31_RS13130	0.28	-1.0
52,024	-		EX31_RS13130	0.28	-1.2
52,024	-		EX31_RS13130	0.28	-0.6
52,244	+		EX31_RS13130	0.55	+1.5
52,244	+		EX31_RS13130	0.55	-0.7
52,244	+		EX31_RS13130	0.55	+0.4
52,244	+		EX31_RS13130	0.55	+0.7
52,244	+		EX31_RS13130	0.55	+0.3
52,244	+		EX31_RS13130	0.55	+0.4
52,244	+		EX31_RS13130	0.55	-0.1
52,245	-		EX31_RS13130	0.55	-0.7
52,245	-		EX31_RS13130	0.55	-0.3
52,245	-		EX31_RS13130	0.55	+0.3
52,245	-		EX31_RS13130	0.55	-0.2
52,245	-		EX31_RS13130	0.55	-0.9
52,245	-		EX31_RS13130	0.55	+0.4
52,288	-		EX31_RS13130	0.60	-0.5
52,290	+		EX31_RS13130	0.60	-0.8
52,351	-		EX31_RS13130	0.68	+0.3