Strain Fitness in Rahnella sp. WP5 around EX31_RS12125

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
91,878	+		EX31_RS12120	0.43	-1.3
91,878	+		EX31_RS12120	0.43	-0.1
91,878	+		EX31_RS12120	0.43	-0.3
91,879	-		EX31_RS12120	0.43	-1.3
91,941	+		EX31_RS12120	0.47	+1.2
91,942	-		EX31_RS12120	0.47	-1.3
91,948	-		EX31_RS12120	0.47	-1.1
92,131	-		EX31_RS12120	0.59	+1.2
92,131	-		EX31_RS12120	0.59	+0.2
92,135	-		EX31_RS12120	0.59	-0.5
92,135	-		EX31_RS12120	0.59	-0.0
92,169	-		EX31_RS12120	0.61	+0.8
92,230	+		EX31_RS12120	0.65	+0.8
92,230	+		EX31_RS12120	0.65	-0.3
92,231	-		EX31_RS12120	0.65	-0.0
92,231	-		EX31_RS12120	0.65	+0.7
92,231	-		EX31_RS12120	0.65	+0.9
92,235	+		EX31_RS12120	0.65	+0.2
92,235	+		EX31_RS12120	0.65	-0.6
92,236	-		EX31_RS12120	0.65	-0.1
92,236	-		EX31_RS12120	0.65	+0.6
92,236	-		EX31_RS12120	0.65	+0.7
92,283	+		EX31_RS12120	0.68	+0.2
92,283	+		EX31_RS12120	0.68	+0.5
92,284	-		EX31_RS12120	0.68	+0.0
92,284	-		EX31_RS12120	0.68	-0.3
92,312	+		EX31_RS12120	0.70	-0.7
92,348	-		EX31_RS12120	0.72	+1.4
92,517	+		EX31_RS12120	0.82	-0.1
92,517	+		EX31_RS12120	0.82	+0.2
92,517	+		EX31_RS12120	0.82	+0.0
92,518	-		EX31_RS12120	0.82	-0.0
92,556	+		EX31_RS12120	0.84	-0.2
92,557	-		EX31_RS12120	0.84	-0.6
92,557	-		EX31_RS12120	0.84	-0.1
92,606	+		EX31_RS12120	0.87	+0.6
92,616	+		EX31_RS12120	0.88	+0.1
92,616	+		EX31_RS12120	0.88	+0.7
92,617	-		EX31_RS12120	0.88	+0.7
92,713	+				-0.8
92,714	-				+2.0
92,714	-				-1.7
92,780	+				+0.5
92,781	-				+0.7
92,812	+				+0.3
92,812	+				+1.0
92,812	+				+0.2
92,813	-				+0.1
92,813	-				-0.5
92,813	-				+0.0
92,813	-				-0.0
92,813	-				-0.1
92,824	+				-0.9
92,875	-				-0.6
92,928	+				-0.2
92,928	+				-0.2
92,928	+				-0.2
92,928	+				-0.3
92,929	-				-0.3
92,929	-				-1.4
92,929	-				+0.8
92,929	-				+0.5
93,004	+		EX31_RS12125	0.15	+0.4
93,004	+		EX31_RS12125	0.15	-1.3
93,059	+		EX31_RS12125	0.21	-0.5
93,059	+		EX31_RS12125	0.21	-0.7
93,060	-		EX31_RS12125	0.21	+0.3
93,113	-		EX31_RS12125	0.27	-0.3
93,128	-		EX31_RS12125	0.29	+0.0
93,171	+		EX31_RS12125	0.34	-0.5
93,171	+		EX31_RS12125	0.34	-0.4
93,171	+		EX31_RS12125	0.34	+0.5
93,172	-		EX31_RS12125	0.34	+1.2
93,289	+		EX31_RS12125	0.47	-0.8
93,290	-		EX31_RS12125	0.47	+0.8
93,385	+		EX31_RS12125	0.58	-0.7
93,405	+		EX31_RS12125	0.61	-0.2
93,406	-		EX31_RS12125	0.61	-0.8
93,496	+		EX31_RS12125	0.71	-0.4
93,496	+		EX31_RS12125	0.71	-0.4
93,497	-		EX31_RS12125	0.71	-0.2
93,497	-		EX31_RS12125	0.71	-0.8
93,497	-		EX31_RS12125	0.71	+0.3
93,497	-		EX31_RS12125	0.71	+0.4
93,497	-		EX31_RS12125	0.71	-0.2
93,541	+		EX31_RS12125	0.76	+1.2
93,558	+		EX31_RS12125	0.78	-0.3
93,558	+		EX31_RS12125	0.78	-0.3
93,558	+		EX31_RS12125	0.78	+0.2
93,559	-		EX31_RS12125	0.78	+0.7
93,559	-		EX31_RS12125	0.78	+0.2
93,587	+		EX31_RS12125	0.81	-0.3
93,587	+		EX31_RS12125	0.81	+0.6
93,587	+		EX31_RS12125	0.81	-0.0
93,588	-		EX31_RS12125	0.81	-0.1
93,729	+				-0.7
93,730	-				+0.2
93,730	-				-0.2
93,730	-				-0.4
93,734	+				-1.0
93,734	+				-0.8
93,734	+				-0.2
93,735	-				-0.4
93,735	-				+0.8
93,735	-				-0.7
93,739	+				+0.2
93,739	+				-1.5
93,739	+				-0.6
93,740	-				-1.0
93,784	+				-0.5
93,791	+				-0.5
93,792	-				+1.8
93,853	+				-0.1
93,853	+				-1.9
93,853	+				+0.0
93,853	+				-0.1
93,853	+				-0.6
93,854	-				+0.3
93,854	-				+0.5
93,854	-				+1.4
93,854	-				+0.5
93,854	-				+0.3
93,854	-				-0.1
93,854	-				+0.7
93,855	+				-0.5
93,855	+				-0.8
93,855	+				-0.7
93,968	+		EX31_RS12130	0.17	+0.1
93,968	+		EX31_RS12130	0.17	-0.8
93,969	-		EX31_RS12130	0.17	+1.4
93,969	-		EX31_RS12130	0.17	+0.9
93,969	-		EX31_RS12130	0.17	+1.9
93,978	+		EX31_RS12130	0.19	-0.5
93,979	-		EX31_RS12130	0.20	+0.7
93,979	-		EX31_RS12130	0.20	-0.1
94,011	+		EX31_RS12130	0.27	-0.9
94,011	+		EX31_RS12130	0.27	-0.4
94,011	+		EX31_RS12130	0.27	-1.9
94,011	+		EX31_RS12130	0.27	+0.4
94,011	+		EX31_RS12130	0.27	-0.8
94,011	+		EX31_RS12130	0.27	-0.2
94,012	-		EX31_RS12130	0.27	+0.8
94,012	-		EX31_RS12130	0.27	+1.3
94,012	-		EX31_RS12130	0.27	+0.1
94,012	-		EX31_RS12130	0.27	+0.1
94,012	-		EX31_RS12130	0.27	+1.1
94,012	-		EX31_RS12130	0.27	+0.5
94,012	-		EX31_RS12130	0.27	+0.9
94,012	-		EX31_RS12130	0.27	+0.2
94,033	+		EX31_RS12130	0.32	-0.0
94,033	+		EX31_RS12130	0.32	+1.0
94,034	-		EX31_RS12130	0.33	-0.9
94,034	-		EX31_RS12130	0.33	+0.2
94,034	-		EX31_RS12130	0.33	+1.8
94,066	+		EX31_RS12130	0.40	+1.4
94,066	+		EX31_RS12130	0.40	-0.2
94,066	+		EX31_RS12130	0.40	-0.4
94,066	+		EX31_RS12130	0.40	-1.3
94,066	+		EX31_RS12130	0.40	+0.8
94,066	+		EX31_RS12130	0.40	+0.4
94,067	-		EX31_RS12130	0.40	+0.7
94,067	-		EX31_RS12130	0.40	-0.6
94,067	-		EX31_RS12130	0.40	+1.0
94,067	-		EX31_RS12130	0.40	-0.3
94,067	-		EX31_RS12130	0.40	+0.1
94,067	-		EX31_RS12130	0.40	+0.0
94,075	+		EX31_RS12130	0.42	+0.2
94,075	+		EX31_RS12130	0.42	+0.0
94,155	+		EX31_RS12130	0.61	+0.0
94,155	+		EX31_RS12130	0.61	+0.2
94,155	+		EX31_RS12130	0.61	+0.1
94,156	-		EX31_RS12130	0.61	+1.6
94,156	-		EX31_RS12130	0.61	+0.3
94,156	-		EX31_RS12130	0.61	-1.0
94,156	-		EX31_RS12130	0.61	-0.5
94,156	-		EX31_RS12130	0.61	+0.2
94,170	-		EX31_RS12130	0.65	-0.6
94,271	+		EX31_RS12130	0.89	+0.3
94,271	+		EX31_RS12130	0.89	-0.0
94,322	-				+0.7
94,322	-				+2.1
94,362	+				+0.1
94,362	+				-0.5
94,362	+				+0.1
94,362	+				-0.7
94,363	-				+0.5
94,365	+				-0.3
94,366	-				+0.9
94,383	+		EX31_RS12135	0.10	-1.0
94,435	+		EX31_RS12135	0.18	+1.1
94,435	+		EX31_RS12135	0.18	+1.4
94,435	+		EX31_RS12135	0.18	+0.2
94,479	+		EX31_RS12135	0.24	-0.1
94,480	-		EX31_RS12135	0.24	+0.9
94,480	-		EX31_RS12135	0.24	-0.8
94,557	-		EX31_RS12135	0.36	-0.1
94,557	-		EX31_RS12135	0.36	-1.2
94,557	-		EX31_RS12135	0.36	-0.5
94,557	-		EX31_RS12135	0.36	-1.2
94,557	-		EX31_RS12135	0.36	+0.3
94,612	+		EX31_RS12135	0.44	+1.8
94,613	-		EX31_RS12135	0.44	+0.9
94,679	+		EX31_RS12135	0.53	+2.2
94,679	+		EX31_RS12135	0.53	-0.7
94,679	+		EX31_RS12135	0.53	-1.3
94,697	+		EX31_RS12135	0.56	-0.4
94,697	+		EX31_RS12135	0.56	-0.5
94,698	-		EX31_RS12135	0.56	+0.9
94,698	-		EX31_RS12135	0.56	-0.3
94,698	-		EX31_RS12135	0.56	-0.9
94,698	-		EX31_RS12135	0.56	+1.0
94,703	+		EX31_RS12135	0.57	-0.4
94,703	+		EX31_RS12135	0.57	-0.6
94,704	-		EX31_RS12135	0.57	-0.0