Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS23250 and EX31_RS23255 are separated by 57 nucleotides EX31_RS23255 and EX31_RS23260 are separated by 20 nucleotides
EX31_RS23250: EX31_RS23250 - HAD-IIA family hydrolase, at 408,160 to 408,912
_RS23250
EX31_RS23255: EX31_RS23255 - ROK family protein, at 408,970 to 410,193
_RS23255
EX31_RS23260: EX31_RS23260 - N-acetylglucosamine-6-phosphate deacetylase, at 410,214 to 411,353
_RS23260
Position (kb) 408
409
410
411 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 408.161 kb on + strand at 408.162 kb on - strand at 408.191 kb on + strand at 408.301 kb on - strand, within EX31_RS23250 at 408.310 kb on - strand, within EX31_RS23250 at 408.327 kb on + strand, within EX31_RS23250 at 408.327 kb on + strand, within EX31_RS23250 at 408.328 kb on - strand, within EX31_RS23250 at 408.352 kb on - strand, within EX31_RS23250 at 408.352 kb on - strand, within EX31_RS23250 at 408.395 kb on + strand, within EX31_RS23250 at 408.395 kb on + strand, within EX31_RS23250 at 408.395 kb on + strand, within EX31_RS23250 at 408.395 kb on + strand, within EX31_RS23250 at 408.396 kb on - strand, within EX31_RS23250 at 408.396 kb on - strand, within EX31_RS23250 at 408.396 kb on - strand, within EX31_RS23250 at 408.396 kb on - strand, within EX31_RS23250 at 408.396 kb on - strand, within EX31_RS23250 at 408.474 kb on + strand, within EX31_RS23250 at 408.475 kb on - strand, within EX31_RS23250 at 408.529 kb on - strand, within EX31_RS23250 at 408.547 kb on - strand, within EX31_RS23250 at 408.548 kb on + strand, within EX31_RS23250 at 408.548 kb on + strand, within EX31_RS23250 at 408.548 kb on + strand, within EX31_RS23250 at 408.548 kb on + strand, within EX31_RS23250 at 408.548 kb on + strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.549 kb on - strand, within EX31_RS23250 at 408.601 kb on - strand, within EX31_RS23250 at 408.614 kb on + strand, within EX31_RS23250 at 408.615 kb on - strand, within EX31_RS23250 at 408.615 kb on - strand, within EX31_RS23250 at 408.615 kb on - strand, within EX31_RS23250 at 408.650 kb on + strand, within EX31_RS23250 at 408.650 kb on + strand, within EX31_RS23250 at 408.650 kb on + strand, within EX31_RS23250 at 408.651 kb on - strand, within EX31_RS23250 at 408.651 kb on - strand, within EX31_RS23250 at 408.651 kb on - strand, within EX31_RS23250 at 408.782 kb on + strand, within EX31_RS23250 at 408.782 kb on + strand, within EX31_RS23250 at 408.782 kb on + strand, within EX31_RS23250 at 408.782 kb on + strand, within EX31_RS23250 at 408.783 kb on - strand, within EX31_RS23250 at 408.783 kb on - strand, within EX31_RS23250 at 408.783 kb on - strand, within EX31_RS23250 at 408.783 kb on - strand, within EX31_RS23250 at 408.783 kb on - strand, within EX31_RS23250 at 408.787 kb on - strand, within EX31_RS23250 at 408.796 kb on - strand, within EX31_RS23250 at 408.850 kb on + strand at 408.895 kb on + strand at 408.895 kb on + strand at 408.896 kb on - strand at 408.896 kb on - strand at 408.896 kb on - strand at 408.896 kb on - strand at 408.956 kb on + strand at 408.956 kb on + strand at 408.956 kb on + strand at 408.956 kb on + strand at 408.956 kb on + strand at 408.957 kb on - strand at 408.957 kb on - strand at 408.957 kb on - strand at 408.957 kb on - strand at 408.957 kb on - strand at 408.959 kb on + strand at 408.959 kb on + strand at 408.959 kb on + strand at 408.959 kb on + strand at 408.959 kb on + strand at 408.960 kb on - strand at 408.960 kb on - strand at 408.960 kb on - strand at 408.960 kb on - strand at 408.960 kb on - strand at 408.960 kb on - strand at 408.960 kb on - strand at 408.960 kb on - strand at 408.960 kb on - strand at 408.960 kb on - strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.961 kb on + strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.962 kb on - strand at 408.972 kb on - strand at 409.114 kb on - strand, within EX31_RS23255 at 409.335 kb on - strand, within EX31_RS23255 at 409.450 kb on - strand, within EX31_RS23255 at 409.476 kb on + strand, within EX31_RS23255 at 409.532 kb on - strand, within EX31_RS23255 at 409.532 kb on - strand, within EX31_RS23255 at 409.532 kb on - strand, within EX31_RS23255 at 409.546 kb on - strand, within EX31_RS23255 at 409.577 kb on + strand, within EX31_RS23255 at 409.577 kb on + strand, within EX31_RS23255 at 409.578 kb on - strand, within EX31_RS23255 at 409.578 kb on - strand, within EX31_RS23255 at 409.578 kb on - strand, within EX31_RS23255 at 409.578 kb on - strand, within EX31_RS23255 at 409.681 kb on - strand, within EX31_RS23255 at 409.689 kb on + strand, within EX31_RS23255 at 409.690 kb on - strand, within EX31_RS23255 at 409.690 kb on - strand, within EX31_RS23255 at 409.691 kb on + strand, within EX31_RS23255 at 409.691 kb on + strand, within EX31_RS23255 at 409.691 kb on + strand, within EX31_RS23255 at 409.691 kb on + strand, within EX31_RS23255 at 409.692 kb on - strand, within EX31_RS23255 at 409.692 kb on - strand, within EX31_RS23255 at 409.692 kb on - strand, within EX31_RS23255 at 409.692 kb on - strand, within EX31_RS23255 at 409.794 kb on + strand, within EX31_RS23255 at 409.795 kb on - strand, within EX31_RS23255 at 409.848 kb on - strand, within EX31_RS23255 at 409.848 kb on - strand, within EX31_RS23255 at 409.891 kb on - strand, within EX31_RS23255 at 409.919 kb on - strand, within EX31_RS23255 at 409.929 kb on + strand, within EX31_RS23255 at 409.957 kb on - strand, within EX31_RS23255 at 409.957 kb on - strand, within EX31_RS23255 at 410.121 kb on - strand at 410.138 kb on - strand at 410.253 kb on - strand at 410.289 kb on - strand at 410.355 kb on - strand, within EX31_RS23260 at 410.476 kb on + strand, within EX31_RS23260 at 410.477 kb on - strand, within EX31_RS23260 at 410.477 kb on - strand, within EX31_RS23260 at 410.477 kb on - strand, within EX31_RS23260 at 410.479 kb on - strand, within EX31_RS23260 at 410.630 kb on - strand, within EX31_RS23260 at 410.630 kb on - strand, within EX31_RS23260 at 410.660 kb on + strand, within EX31_RS23260 at 410.661 kb on - strand, within EX31_RS23260 at 410.661 kb on - strand, within EX31_RS23260 at 410.661 kb on - strand, within EX31_RS23260 at 410.700 kb on - strand, within EX31_RS23260 at 410.701 kb on + strand, within EX31_RS23260 at 410.702 kb on - strand, within EX31_RS23260 at 410.702 kb on - strand, within EX31_RS23260 at 410.702 kb on - strand, within EX31_RS23260 at 410.702 kb on - strand, within EX31_RS23260 at 410.702 kb on - strand, within EX31_RS23260 at 410.702 kb on - strand, within EX31_RS23260 at 410.702 kb on - strand, within EX31_RS23260 at 410.702 kb on - strand, within EX31_RS23260 at 410.755 kb on + strand, within EX31_RS23260 at 410.756 kb on - strand, within EX31_RS23260 at 410.756 kb on - strand, within EX31_RS23260 at 410.756 kb on - strand, within EX31_RS23260 at 410.756 kb on - strand, within EX31_RS23260 at 410.788 kb on - strand, within EX31_RS23260 at 410.814 kb on - strand, within EX31_RS23260 at 410.814 kb on - strand, within EX31_RS23260 at 410.815 kb on + strand, within EX31_RS23260 at 410.815 kb on + strand, within EX31_RS23260 at 410.816 kb on - strand, within EX31_RS23260 at 410.816 kb on - strand, within EX31_RS23260 at 410.816 kb on - strand, within EX31_RS23260 at 410.816 kb on - strand, within EX31_RS23260 at 410.816 kb on - strand, within EX31_RS23260 at 411.004 kb on + strand, within EX31_RS23260 at 411.008 kb on + strand, within EX31_RS23260 at 411.008 kb on + strand, within EX31_RS23260 at 411.008 kb on + strand, within EX31_RS23260 at 411.009 kb on - strand, within EX31_RS23260 at 411.009 kb on - strand, within EX31_RS23260 at 411.009 kb on - strand, within EX31_RS23260 at 411.009 kb on - strand, within EX31_RS23260 at 411.009 kb on - strand, within EX31_RS23260 at 411.009 kb on - strand, within EX31_RS23260 at 411.009 kb on - strand, within EX31_RS23260 at 411.009 kb on - strand, within EX31_RS23260 at 411.037 kb on + strand, within EX31_RS23260 at 411.037 kb on + strand, within EX31_RS23260 at 411.038 kb on - strand, within EX31_RS23260 at 411.038 kb on - strand, within EX31_RS23260 at 411.038 kb on - strand, within EX31_RS23260 at 411.053 kb on + strand, within EX31_RS23260 at 411.124 kb on - strand, within EX31_RS23260 at 411.174 kb on - strand, within EX31_RS23260
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 408,161 + -1.4 408,162 - -0.0 408,191 + +0.6 408,301 - EX31_RS23250 0.19 +1.3 408,310 - EX31_RS23250 0.20 +0.3 408,327 + EX31_RS23250 0.22 -0.3 408,327 + EX31_RS23250 0.22 +0.7 408,328 - EX31_RS23250 0.22 -0.1 408,352 - EX31_RS23250 0.25 -0.4 408,352 - EX31_RS23250 0.25 -1.2 408,395 + EX31_RS23250 0.31 +0.3 408,395 + EX31_RS23250 0.31 +0.0 408,395 + EX31_RS23250 0.31 +0.8 408,395 + EX31_RS23250 0.31 -0.1 408,396 - EX31_RS23250 0.31 -0.7 408,396 - EX31_RS23250 0.31 -0.1 408,396 - EX31_RS23250 0.31 +0.0 408,396 - EX31_RS23250 0.31 +0.9 408,396 - EX31_RS23250 0.31 -0.0 408,474 + EX31_RS23250 0.42 -1.6 408,475 - EX31_RS23250 0.42 -0.3 408,529 - EX31_RS23250 0.49 +0.7 408,547 - EX31_RS23250 0.51 -0.6 408,548 + EX31_RS23250 0.52 -0.7 408,548 + EX31_RS23250 0.52 -1.9 408,548 + EX31_RS23250 0.52 +0.8 408,548 + EX31_RS23250 0.52 -0.4 408,548 + EX31_RS23250 0.52 +1.6 408,549 - EX31_RS23250 0.52 +0.5 408,549 - EX31_RS23250 0.52 -0.1 408,549 - EX31_RS23250 0.52 -0.7 408,549 - EX31_RS23250 0.52 +0.6 408,549 - EX31_RS23250 0.52 -0.7 408,549 - EX31_RS23250 0.52 +0.9 408,549 - EX31_RS23250 0.52 -0.2 408,549 - EX31_RS23250 0.52 +0.5 408,549 - EX31_RS23250 0.52 -1.2 408,549 - EX31_RS23250 0.52 -0.4 408,549 - EX31_RS23250 0.52 +0.2 408,601 - EX31_RS23250 0.59 +1.2 408,614 + EX31_RS23250 0.60 +0.8 408,615 - EX31_RS23250 0.60 -1.5 408,615 - EX31_RS23250 0.60 -0.4 408,615 - EX31_RS23250 0.60 +0.6 408,650 + EX31_RS23250 0.65 +1.0 408,650 + EX31_RS23250 0.65 +0.4 408,650 + EX31_RS23250 0.65 -0.0 408,651 - EX31_RS23250 0.65 +0.9 408,651 - EX31_RS23250 0.65 +0.0 408,651 - EX31_RS23250 0.65 -0.9 408,782 + EX31_RS23250 0.83 -0.5 408,782 + EX31_RS23250 0.83 +0.9 408,782 + EX31_RS23250 0.83 +0.9 408,782 + EX31_RS23250 0.83 -0.7 408,783 - EX31_RS23250 0.83 -1.2 408,783 - EX31_RS23250 0.83 -1.7 408,783 - EX31_RS23250 0.83 -0.2 408,783 - EX31_RS23250 0.83 -0.9 408,783 - EX31_RS23250 0.83 +0.1 408,787 - EX31_RS23250 0.83 +0.5 408,796 - EX31_RS23250 0.84 -1.4 408,850 + -0.4 408,895 + -1.4 408,895 + -0.7 408,896 - -0.2 408,896 - +0.0 408,896 - -1.4 408,896 - +1.2 408,956 + -3.7 408,956 + +0.1 408,956 + -1.2 408,956 + +0.2 408,956 + +0.6 408,957 - +0.1 408,957 - +0.3 408,957 - +1.0 408,957 - +0.6 408,957 - +0.6 408,959 + -0.6 408,959 + -0.0 408,959 + -2.1 408,959 + +0.2 408,959 + +1.0 408,960 - -0.5 408,960 - -1.5 408,960 - -2.1 408,960 - +0.2 408,960 - -0.3 408,960 - -2.2 408,960 - +1.0 408,960 - +0.6 408,960 - -0.2 408,960 - +0.3 408,961 + -2.2 408,961 + +0.5 408,961 + +0.0 408,961 + +0.3 408,961 + -1.1 408,961 + +0.7 408,961 + +1.1 408,961 + -0.3 408,961 + -1.1 408,961 + +0.9 408,961 + +0.0 408,961 + -0.5 408,961 + +1.5 408,962 - +0.4 408,962 - -1.5 408,962 - -0.2 408,962 - -0.3 408,962 - +0.3 408,962 - -0.7 408,962 - -0.8 408,962 - -0.6 408,962 - -0.5 408,962 - -0.2 408,962 - +0.3 408,962 - -0.6 408,962 - +0.6 408,962 - +1.1 408,962 - -0.1 408,972 - -2.7 409,114 - EX31_RS23255 0.12 +0.9 409,335 - EX31_RS23255 0.30 -0.7 409,450 - EX31_RS23255 0.39 -0.5 409,476 + EX31_RS23255 0.41 -0.7 409,532 - EX31_RS23255 0.46 +1.7 409,532 - EX31_RS23255 0.46 +0.5 409,532 - EX31_RS23255 0.46 +0.0 409,546 - EX31_RS23255 0.47 +1.4 409,577 + EX31_RS23255 0.50 -0.7 409,577 + EX31_RS23255 0.50 +0.7 409,578 - EX31_RS23255 0.50 -0.1 409,578 - EX31_RS23255 0.50 +0.6 409,578 - EX31_RS23255 0.50 +0.8 409,578 - EX31_RS23255 0.50 +0.1 409,681 - EX31_RS23255 0.58 +0.2 409,689 + EX31_RS23255 0.59 +1.3 409,690 - EX31_RS23255 0.59 +1.5 409,690 - EX31_RS23255 0.59 +1.4 409,691 + EX31_RS23255 0.59 -0.3 409,691 + EX31_RS23255 0.59 +1.5 409,691 + EX31_RS23255 0.59 +0.0 409,691 + EX31_RS23255 0.59 +0.2 409,692 - EX31_RS23255 0.59 +0.0 409,692 - EX31_RS23255 0.59 +1.4 409,692 - EX31_RS23255 0.59 +0.0 409,692 - EX31_RS23255 0.59 +1.3 409,794 + EX31_RS23255 0.67 +0.5 409,795 - EX31_RS23255 0.67 -0.5 409,848 - EX31_RS23255 0.72 +0.2 409,848 - EX31_RS23255 0.72 -0.2 409,891 - EX31_RS23255 0.75 +1.8 409,919 - EX31_RS23255 0.78 +0.7 409,929 + EX31_RS23255 0.78 -1.3 409,957 - EX31_RS23255 0.81 +0.9 409,957 - EX31_RS23255 0.81 +0.9 410,121 - +0.7 410,138 - +0.7 410,253 - +0.3 410,289 - +1.6 410,355 - EX31_RS23260 0.12 +1.2 410,476 + EX31_RS23260 0.23 -1.0 410,477 - EX31_RS23260 0.23 +0.9 410,477 - EX31_RS23260 0.23 +0.5 410,477 - EX31_RS23260 0.23 +0.9 410,479 - EX31_RS23260 0.23 -0.1 410,630 - EX31_RS23260 0.36 -1.1 410,630 - EX31_RS23260 0.36 +0.1 410,660 + EX31_RS23260 0.39 +0.0 410,661 - EX31_RS23260 0.39 +1.7 410,661 - EX31_RS23260 0.39 +1.7 410,661 - EX31_RS23260 0.39 +1.5 410,700 - EX31_RS23260 0.43 +1.8 410,701 + EX31_RS23260 0.43 -2.4 410,702 - EX31_RS23260 0.43 +0.9 410,702 - EX31_RS23260 0.43 -0.4 410,702 - EX31_RS23260 0.43 +0.7 410,702 - EX31_RS23260 0.43 +0.5 410,702 - EX31_RS23260 0.43 +0.9 410,702 - EX31_RS23260 0.43 +0.6 410,702 - EX31_RS23260 0.43 +0.2 410,702 - EX31_RS23260 0.43 +1.3 410,755 + EX31_RS23260 0.47 +0.8 410,756 - EX31_RS23260 0.48 +0.8 410,756 - EX31_RS23260 0.48 -0.5 410,756 - EX31_RS23260 0.48 +0.9 410,756 - EX31_RS23260 0.48 +1.0 410,788 - EX31_RS23260 0.50 -0.2 410,814 - EX31_RS23260 0.53 +0.8 410,814 - EX31_RS23260 0.53 +1.0 410,815 + EX31_RS23260 0.53 -0.7 410,815 + EX31_RS23260 0.53 +0.4 410,816 - EX31_RS23260 0.53 -0.8 410,816 - EX31_RS23260 0.53 +0.7 410,816 - EX31_RS23260 0.53 +0.8 410,816 - EX31_RS23260 0.53 +0.6 410,816 - EX31_RS23260 0.53 -0.2 411,004 + EX31_RS23260 0.69 +0.3 411,008 + EX31_RS23260 0.70 +0.7 411,008 + EX31_RS23260 0.70 +0.3 411,008 + EX31_RS23260 0.70 +0.1 411,009 - EX31_RS23260 0.70 +0.3 411,009 - EX31_RS23260 0.70 +1.6 411,009 - EX31_RS23260 0.70 +1.2 411,009 - EX31_RS23260 0.70 -0.4 411,009 - EX31_RS23260 0.70 +0.5 411,009 - EX31_RS23260 0.70 +2.7 411,009 - EX31_RS23260 0.70 +2.2 411,009 - EX31_RS23260 0.70 +1.2 411,037 + EX31_RS23260 0.72 +2.0 411,037 + EX31_RS23260 0.72 +1.6 411,038 - EX31_RS23260 0.72 +0.7 411,038 - EX31_RS23260 0.72 +0.7 411,038 - EX31_RS23260 0.72 -0.5 411,053 + EX31_RS23260 0.74 -1.6 411,124 - EX31_RS23260 0.80 +1.2 411,174 - EX31_RS23260 0.84 +1.2
Or see this region's nucleotide sequence