Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS15885 and EX31_RS15890 are separated by 187 nucleotides EX31_RS15890 and EX31_RS15900 are separated by 579 nucleotides
EX31_RS15885: EX31_RS15885 - oxygen-independent coproporphyrinogen III oxidase, at 34,162 to 35,535
_RS15885
EX31_RS15890: EX31_RS15890 - Der GTPase-activating protein YihI, at 35,723 to 36,274
_RS15890
EX31_RS15900: EX31_RS15900 - YihA family ribosome biogenesis GTP-binding protein, at 36,854 to 37,504
_RS15900
Position (kb) 35
36
37 Strain fitness (log2 ratio) -2
-1
0
1
2 at 34.811 kb on + strand, within EX31_RS15885 at 34.811 kb on + strand, within EX31_RS15885 at 34.812 kb on - strand, within EX31_RS15885 at 34.865 kb on + strand, within EX31_RS15885 at 34.865 kb on + strand, within EX31_RS15885 at 34.866 kb on - strand, within EX31_RS15885 at 34.902 kb on - strand, within EX31_RS15885 at 34.914 kb on + strand, within EX31_RS15885 at 34.915 kb on - strand, within EX31_RS15885 at 34.917 kb on + strand, within EX31_RS15885 at 34.917 kb on + strand, within EX31_RS15885 at 34.918 kb on - strand, within EX31_RS15885 at 35.031 kb on + strand, within EX31_RS15885 at 35.031 kb on + strand, within EX31_RS15885 at 35.099 kb on - strand, within EX31_RS15885 at 35.099 kb on - strand, within EX31_RS15885 at 35.131 kb on - strand, within EX31_RS15885 at 35.167 kb on + strand, within EX31_RS15885 at 35.167 kb on + strand, within EX31_RS15885 at 35.167 kb on + strand, within EX31_RS15885 at 35.168 kb on - strand, within EX31_RS15885 at 35.196 kb on + strand, within EX31_RS15885 at 35.235 kb on + strand, within EX31_RS15885 at 35.236 kb on - strand, within EX31_RS15885 at 35.282 kb on + strand, within EX31_RS15885 at 35.282 kb on + strand, within EX31_RS15885 at 35.283 kb on - strand, within EX31_RS15885 at 35.283 kb on - strand, within EX31_RS15885 at 35.295 kb on + strand, within EX31_RS15885 at 35.295 kb on + strand, within EX31_RS15885 at 35.296 kb on - strand, within EX31_RS15885 at 35.319 kb on + strand, within EX31_RS15885 at 35.336 kb on + strand, within EX31_RS15885 at 35.336 kb on + strand, within EX31_RS15885 at 35.337 kb on - strand, within EX31_RS15885 at 35.337 kb on - strand, within EX31_RS15885 at 35.347 kb on - strand, within EX31_RS15885 at 35.369 kb on + strand, within EX31_RS15885 at 35.369 kb on + strand, within EX31_RS15885 at 35.369 kb on + strand, within EX31_RS15885 at 35.369 kb on + strand, within EX31_RS15885 at 35.369 kb on + strand, within EX31_RS15885 at 35.369 kb on + strand, within EX31_RS15885 at 35.369 kb on + strand, within EX31_RS15885 at 35.369 kb on + strand, within EX31_RS15885 at 35.369 kb on + strand, within EX31_RS15885 at 35.370 kb on - strand, within EX31_RS15885 at 35.370 kb on - strand, within EX31_RS15885 at 35.370 kb on - strand, within EX31_RS15885 at 35.370 kb on - strand, within EX31_RS15885 at 35.370 kb on - strand, within EX31_RS15885 at 35.422 kb on - strand at 35.424 kb on + strand at 35.424 kb on + strand at 35.429 kb on + strand at 35.430 kb on - strand at 35.430 kb on - strand at 35.483 kb on + strand at 35.483 kb on + strand at 35.483 kb on + strand at 35.489 kb on + strand at 35.489 kb on + strand at 35.489 kb on + strand at 35.490 kb on - strand at 35.490 kb on - strand at 35.520 kb on + strand at 35.520 kb on + strand at 35.521 kb on - strand at 35.540 kb on + strand at 35.540 kb on + strand at 35.541 kb on - strand at 35.579 kb on + strand at 35.580 kb on - strand at 35.651 kb on + strand at 35.651 kb on + strand at 35.652 kb on - strand at 35.676 kb on + strand at 35.676 kb on + strand at 35.676 kb on + strand at 35.676 kb on + strand at 35.676 kb on + strand at 35.676 kb on + strand at 35.676 kb on + strand at 35.677 kb on - strand at 35.677 kb on - strand at 35.677 kb on - strand at 35.690 kb on + strand at 35.691 kb on - strand at 35.691 kb on - strand at 35.691 kb on - strand at 35.696 kb on + strand at 35.697 kb on - strand at 35.697 kb on - strand at 35.719 kb on + strand at 35.720 kb on - strand at 35.720 kb on - strand at 35.720 kb on - strand at 35.720 kb on - strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.868 kb on + strand, within EX31_RS15890 at 35.868 kb on + strand, within EX31_RS15890 at 35.868 kb on + strand, within EX31_RS15890 at 35.868 kb on + strand, within EX31_RS15890 at 35.868 kb on + strand, within EX31_RS15890 at 35.868 kb on + strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.869 kb on - strand, within EX31_RS15890 at 35.888 kb on + strand, within EX31_RS15890 at 35.888 kb on + strand, within EX31_RS15890 at 35.889 kb on - strand, within EX31_RS15890 at 35.949 kb on - strand, within EX31_RS15890 at 35.977 kb on + strand, within EX31_RS15890 at 35.978 kb on - strand, within EX31_RS15890 at 35.978 kb on - strand, within EX31_RS15890 at 35.978 kb on - strand, within EX31_RS15890 at 36.077 kb on - strand, within EX31_RS15890 at 36.152 kb on - strand, within EX31_RS15890 at 36.229 kb on + strand at 36.229 kb on + strand at 36.229 kb on + strand at 36.230 kb on - strand at 36.287 kb on + strand at 36.287 kb on + strand at 36.287 kb on + strand at 36.287 kb on + strand at 36.288 kb on - strand at 36.288 kb on - strand at 36.288 kb on - strand at 36.295 kb on + strand at 36.295 kb on + strand at 36.295 kb on + strand at 36.295 kb on + strand at 36.296 kb on - strand at 36.296 kb on - strand at 36.296 kb on - strand at 36.296 kb on - strand at 36.296 kb on - strand at 36.296 kb on - strand at 36.296 kb on - strand at 36.301 kb on + strand at 36.301 kb on + strand at 36.301 kb on + strand at 36.301 kb on + strand at 36.301 kb on + strand at 36.301 kb on + strand at 36.301 kb on + strand at 36.301 kb on + strand at 36.301 kb on + strand at 36.302 kb on - strand at 36.302 kb on - strand at 36.302 kb on - strand at 36.302 kb on - strand at 36.302 kb on - strand at 36.302 kb on - strand at 36.302 kb on - strand at 36.302 kb on - strand at 36.302 kb on - strand at 36.304 kb on + strand at 36.306 kb on + strand at 36.306 kb on + strand at 36.307 kb on - strand at 36.307 kb on - strand at 36.307 kb on - strand at 36.307 kb on - strand at 36.396 kb on + strand at 36.396 kb on + strand at 36.396 kb on + strand at 36.407 kb on + strand at 36.407 kb on + strand at 36.407 kb on + strand at 36.407 kb on + strand at 36.407 kb on + strand at 36.407 kb on + strand at 36.408 kb on - strand at 36.408 kb on - strand at 36.408 kb on - strand at 36.408 kb on - strand at 36.408 kb on - strand at 36.408 kb on - strand at 36.408 kb on - strand at 36.408 kb on - strand at 36.408 kb on - strand at 36.418 kb on + strand at 36.418 kb on + strand at 36.419 kb on - strand at 36.419 kb on - strand at 36.419 kb on - strand at 36.420 kb on + strand at 36.420 kb on + strand at 36.420 kb on + strand at 36.420 kb on + strand at 36.421 kb on - strand at 36.421 kb on - strand at 36.421 kb on - strand at 36.421 kb on - strand at 36.478 kb on + strand at 36.478 kb on + strand at 36.479 kb on - strand at 36.479 kb on - strand at 36.557 kb on + strand at 36.557 kb on + strand at 36.557 kb on + strand at 36.558 kb on - strand at 36.648 kb on + strand at 36.712 kb on - strand at 36.712 kb on - strand at 36.712 kb on - strand at 36.712 kb on - strand at 36.712 kb on - strand at 36.810 kb on + strand at 36.810 kb on + strand at 36.810 kb on + strand at 36.810 kb on + strand at 36.810 kb on + strand at 36.811 kb on - strand at 36.811 kb on - strand at 36.812 kb on + strand at 36.812 kb on + strand at 36.812 kb on + strand at 36.827 kb on + strand at 36.827 kb on + strand at 36.827 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 34,811 + EX31_RS15885 0.47 +0.5 34,811 + EX31_RS15885 0.47 +0.4 34,812 - EX31_RS15885 0.47 -1.1 34,865 + EX31_RS15885 0.51 -0.3 34,865 + EX31_RS15885 0.51 +0.2 34,866 - EX31_RS15885 0.51 +1.4 34,902 - EX31_RS15885 0.54 +1.8 34,914 + EX31_RS15885 0.55 -0.1 34,915 - EX31_RS15885 0.55 +0.1 34,917 + EX31_RS15885 0.55 +0.4 34,917 + EX31_RS15885 0.55 +0.5 34,918 - EX31_RS15885 0.55 +1.1 35,031 + EX31_RS15885 0.63 -0.2 35,031 + EX31_RS15885 0.63 +0.2 35,099 - EX31_RS15885 0.68 +0.3 35,099 - EX31_RS15885 0.68 +1.0 35,131 - EX31_RS15885 0.71 +0.5 35,167 + EX31_RS15885 0.73 -0.5 35,167 + EX31_RS15885 0.73 -1.0 35,167 + EX31_RS15885 0.73 +0.8 35,168 - EX31_RS15885 0.73 -0.2 35,196 + EX31_RS15885 0.75 -1.7 35,235 + EX31_RS15885 0.78 +1.1 35,236 - EX31_RS15885 0.78 -0.2 35,282 + EX31_RS15885 0.82 +0.0 35,282 + EX31_RS15885 0.82 +0.1 35,283 - EX31_RS15885 0.82 -0.7 35,283 - EX31_RS15885 0.82 +0.5 35,295 + EX31_RS15885 0.82 +0.9 35,295 + EX31_RS15885 0.82 +0.2 35,296 - EX31_RS15885 0.83 +0.2 35,319 + EX31_RS15885 0.84 +0.1 35,336 + EX31_RS15885 0.85 +0.3 35,336 + EX31_RS15885 0.85 +0.5 35,337 - EX31_RS15885 0.86 -0.1 35,337 - EX31_RS15885 0.86 +0.6 35,347 - EX31_RS15885 0.86 -0.1 35,369 + EX31_RS15885 0.88 -0.0 35,369 + EX31_RS15885 0.88 -0.1 35,369 + EX31_RS15885 0.88 +0.3 35,369 + EX31_RS15885 0.88 -0.1 35,369 + EX31_RS15885 0.88 +0.4 35,369 + EX31_RS15885 0.88 -0.1 35,369 + EX31_RS15885 0.88 +0.5 35,369 + EX31_RS15885 0.88 -0.3 35,369 + EX31_RS15885 0.88 -0.2 35,370 - EX31_RS15885 0.88 +1.0 35,370 - EX31_RS15885 0.88 -0.3 35,370 - EX31_RS15885 0.88 -0.8 35,370 - EX31_RS15885 0.88 -0.2 35,370 - EX31_RS15885 0.88 -0.0 35,422 - -0.2 35,424 + +0.5 35,424 + +0.4 35,429 + +0.5 35,430 - +0.5 35,430 - +0.4 35,483 + -0.1 35,483 + +0.5 35,483 + +0.3 35,489 + -1.1 35,489 + +0.2 35,489 + +0.6 35,490 - +1.0 35,490 - +0.0 35,520 + -0.3 35,520 + +0.4 35,521 - -0.2 35,540 + +0.9 35,540 + +0.2 35,541 - +0.9 35,579 + +0.1 35,580 - +1.2 35,651 + +0.4 35,651 + +0.1 35,652 - -0.7 35,676 + -0.7 35,676 + +0.2 35,676 + +0.3 35,676 + -0.6 35,676 + +0.3 35,676 + -0.4 35,676 + +1.3 35,677 - +0.6 35,677 - -0.6 35,677 - +0.5 35,690 + -0.2 35,691 - -0.4 35,691 - +1.1 35,691 - -0.4 35,696 + -0.5 35,697 - -0.5 35,697 - +0.6 35,719 + -1.2 35,720 - -0.0 35,720 - -0.2 35,720 - +0.2 35,720 - +0.4 35,724 + -0.3 35,724 + +0.6 35,724 + +0.7 35,724 + -1.0 35,724 + -0.5 35,724 + -0.8 35,724 + +0.3 35,724 + +0.4 35,724 + -0.2 35,725 - -0.0 35,725 - +0.1 35,725 - -0.5 35,725 - +0.3 35,725 - +0.1 35,725 - +0.1 35,725 - +0.2 35,725 - +0.4 35,725 - -1.1 35,868 + EX31_RS15890 0.26 -0.4 35,868 + EX31_RS15890 0.26 -0.2 35,868 + EX31_RS15890 0.26 +0.2 35,868 + EX31_RS15890 0.26 +0.7 35,868 + EX31_RS15890 0.26 +0.6 35,868 + EX31_RS15890 0.26 -0.3 35,869 - EX31_RS15890 0.26 -0.0 35,869 - EX31_RS15890 0.26 +1.3 35,869 - EX31_RS15890 0.26 +0.3 35,869 - EX31_RS15890 0.26 +0.1 35,869 - EX31_RS15890 0.26 +0.6 35,869 - EX31_RS15890 0.26 +0.7 35,869 - EX31_RS15890 0.26 -0.3 35,869 - EX31_RS15890 0.26 +0.4 35,869 - EX31_RS15890 0.26 +0.5 35,869 - EX31_RS15890 0.26 +0.2 35,869 - EX31_RS15890 0.26 +0.6 35,869 - EX31_RS15890 0.26 +1.1 35,869 - EX31_RS15890 0.26 +0.8 35,869 - EX31_RS15890 0.26 -0.3 35,869 - EX31_RS15890 0.26 +0.9 35,888 + EX31_RS15890 0.30 -0.0 35,888 + EX31_RS15890 0.30 +0.4 35,889 - EX31_RS15890 0.30 +0.3 35,949 - EX31_RS15890 0.41 +0.7 35,977 + EX31_RS15890 0.46 +0.5 35,978 - EX31_RS15890 0.46 +0.3 35,978 - EX31_RS15890 0.46 +0.1 35,978 - EX31_RS15890 0.46 +1.7 36,077 - EX31_RS15890 0.64 -0.3 36,152 - EX31_RS15890 0.78 -0.1 36,229 + -0.1 36,229 + +0.1 36,229 + +0.1 36,230 - -0.4 36,287 + -0.1 36,287 + +0.4 36,287 + +0.7 36,287 + +0.0 36,288 - +0.0 36,288 - +0.5 36,288 - +0.1 36,295 + +0.3 36,295 + +0.1 36,295 + +0.5 36,295 + +0.2 36,296 - -0.5 36,296 - +1.1 36,296 - +0.5 36,296 - -0.0 36,296 - +1.2 36,296 - -2.1 36,296 - -0.1 36,301 + +0.8 36,301 + -0.1 36,301 + +0.3 36,301 + +0.4 36,301 + +0.2 36,301 + -0.4 36,301 + -0.3 36,301 + +0.4 36,301 + +1.3 36,302 - -0.6 36,302 - -0.5 36,302 - +0.0 36,302 - -0.1 36,302 - -0.1 36,302 - +0.7 36,302 - +0.4 36,302 - -0.2 36,302 - -0.0 36,304 + +0.2 36,306 + +0.4 36,306 + +0.6 36,307 - +0.4 36,307 - -0.8 36,307 - -0.0 36,307 - -0.3 36,396 + -1.6 36,396 + -0.8 36,396 + -0.3 36,407 + -0.0 36,407 + +0.1 36,407 + +0.9 36,407 + -0.8 36,407 + -1.1 36,407 + +0.1 36,408 - +0.1 36,408 - +0.5 36,408 - -0.1 36,408 - -1.3 36,408 - +0.4 36,408 - +0.2 36,408 - -0.0 36,408 - +1.1 36,408 - +1.0 36,418 + +1.0 36,418 + -0.2 36,419 - -0.6 36,419 - +0.4 36,419 - +0.2 36,420 + +0.1 36,420 + -0.1 36,420 + +0.4 36,420 + -0.2 36,421 - +0.4 36,421 - +0.7 36,421 - -0.2 36,421 - +1.4 36,478 + +0.5 36,478 + +0.2 36,479 - -0.3 36,479 - +0.5 36,557 + +0.1 36,557 + -0.0 36,557 + +0.0 36,558 - +0.3 36,648 + -0.2 36,712 - -0.3 36,712 - -0.6 36,712 - +0.9 36,712 - -0.4 36,712 - +0.3 36,810 + -1.1 36,810 + -0.7 36,810 + -0.2 36,810 + -0.3 36,810 + -0.6 36,811 - +0.9 36,811 - -0.2 36,812 + -1.0 36,812 + -0.3 36,812 + +0.4 36,827 + +0.1 36,827 + -0.4 36,827 + +1.5
Or see this region's nucleotide sequence