Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS08365 and EX31_RS08370 are separated by 301 nucleotides EX31_RS08370 and EX31_RS08375 are separated by 77 nucleotides
EX31_RS08365: EX31_RS08365 - glutamine amidotransferase, at 176,978 to 177,724
_RS08365
EX31_RS08370: EX31_RS08370 - TerC family protein, at 178,026 to 178,997
_RS08370
EX31_RS08375: EX31_RS08375 - magnesium-translocating P-type ATPase, at 179,075 to 181,777
_RS08375
Position (kb) 178
179 Strain fitness (log2 ratio) -2
-1
0
1
2 at 177.037 kb on + strand at 177.089 kb on - strand, within EX31_RS08365 at 177.155 kb on + strand, within EX31_RS08365 at 177.155 kb on + strand, within EX31_RS08365 at 177.156 kb on - strand, within EX31_RS08365 at 177.156 kb on - strand, within EX31_RS08365 at 177.156 kb on - strand, within EX31_RS08365 at 177.156 kb on - strand, within EX31_RS08365 at 177.258 kb on + strand, within EX31_RS08365 at 177.258 kb on + strand, within EX31_RS08365 at 177.258 kb on + strand, within EX31_RS08365 at 177.278 kb on + strand, within EX31_RS08365 at 177.300 kb on - strand, within EX31_RS08365 at 177.323 kb on + strand, within EX31_RS08365 at 177.451 kb on + strand, within EX31_RS08365 at 177.451 kb on + strand, within EX31_RS08365 at 177.452 kb on - strand, within EX31_RS08365 at 177.516 kb on - strand, within EX31_RS08365 at 177.578 kb on + strand, within EX31_RS08365 at 177.578 kb on + strand, within EX31_RS08365 at 177.578 kb on + strand, within EX31_RS08365 at 177.578 kb on + strand, within EX31_RS08365 at 177.578 kb on + strand, within EX31_RS08365 at 177.578 kb on + strand, within EX31_RS08365 at 177.579 kb on - strand, within EX31_RS08365 at 177.579 kb on - strand, within EX31_RS08365 at 177.579 kb on - strand, within EX31_RS08365 at 177.579 kb on - strand, within EX31_RS08365 at 177.579 kb on - strand, within EX31_RS08365 at 177.598 kb on + strand, within EX31_RS08365 at 177.613 kb on + strand, within EX31_RS08365 at 177.614 kb on - strand, within EX31_RS08365 at 177.618 kb on + strand, within EX31_RS08365 at 177.619 kb on - strand, within EX31_RS08365 at 177.619 kb on - strand, within EX31_RS08365 at 177.723 kb on - strand at 177.732 kb on + strand at 177.732 kb on + strand at 177.732 kb on + strand at 177.733 kb on - strand at 177.772 kb on - strand at 177.772 kb on - strand at 177.795 kb on + strand at 177.795 kb on + strand at 177.795 kb on + strand at 177.795 kb on + strand at 177.795 kb on + strand at 177.796 kb on - strand at 177.821 kb on + strand at 177.821 kb on + strand at 177.821 kb on + strand at 177.821 kb on + strand at 177.883 kb on + strand at 177.883 kb on + strand at 177.883 kb on + strand at 177.883 kb on + strand at 177.883 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.902 kb on + strand at 177.903 kb on - strand at 177.903 kb on - strand at 177.903 kb on - strand at 177.903 kb on - strand at 177.903 kb on - strand at 177.903 kb on - strand at 177.903 kb on - strand at 177.903 kb on - strand at 177.903 kb on - strand at 177.906 kb on + strand at 177.906 kb on + strand at 177.906 kb on + strand at 177.906 kb on + strand at 177.906 kb on + strand at 177.906 kb on + strand at 177.907 kb on - strand at 177.907 kb on - strand at 177.907 kb on - strand at 177.907 kb on - strand at 177.914 kb on + strand at 177.914 kb on + strand at 177.914 kb on + strand at 177.914 kb on + strand at 177.914 kb on + strand at 177.914 kb on + strand at 177.914 kb on + strand at 177.915 kb on - strand at 178.036 kb on + strand at 178.072 kb on + strand at 178.073 kb on - strand at 178.073 kb on - strand at 178.073 kb on - strand at 178.078 kb on + strand at 178.078 kb on + strand at 178.079 kb on - strand at 178.079 kb on - strand at 178.079 kb on - strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.082 kb on + strand at 178.083 kb on - strand at 178.083 kb on - strand at 178.083 kb on - strand at 178.083 kb on - strand at 178.083 kb on - strand at 178.083 kb on - strand at 178.083 kb on - strand at 178.083 kb on - strand at 178.083 kb on - strand at 178.083 kb on - strand at 178.136 kb on + strand, within EX31_RS08370 at 178.137 kb on - strand, within EX31_RS08370 at 178.137 kb on - strand, within EX31_RS08370 at 178.137 kb on - strand, within EX31_RS08370 at 178.171 kb on + strand, within EX31_RS08370 at 178.209 kb on + strand, within EX31_RS08370 at 178.302 kb on - strand, within EX31_RS08370 at 178.332 kb on + strand, within EX31_RS08370 at 178.332 kb on + strand, within EX31_RS08370 at 178.332 kb on + strand, within EX31_RS08370 at 178.332 kb on + strand, within EX31_RS08370 at 178.333 kb on - strand, within EX31_RS08370 at 178.333 kb on - strand, within EX31_RS08370 at 178.333 kb on - strand, within EX31_RS08370 at 178.333 kb on - strand, within EX31_RS08370 at 178.333 kb on - strand, within EX31_RS08370 at 178.333 kb on - strand, within EX31_RS08370 at 178.366 kb on + strand, within EX31_RS08370 at 178.374 kb on + strand, within EX31_RS08370 at 178.374 kb on + strand, within EX31_RS08370 at 178.446 kb on - strand, within EX31_RS08370 at 178.459 kb on - strand, within EX31_RS08370 at 178.620 kb on - strand, within EX31_RS08370 at 178.631 kb on + strand, within EX31_RS08370 at 178.632 kb on - strand, within EX31_RS08370 at 178.655 kb on + strand, within EX31_RS08370 at 178.656 kb on - strand, within EX31_RS08370 at 178.656 kb on - strand, within EX31_RS08370 at 178.779 kb on + strand, within EX31_RS08370 at 178.779 kb on + strand, within EX31_RS08370 at 178.779 kb on + strand, within EX31_RS08370 at 178.779 kb on + strand, within EX31_RS08370 at 178.779 kb on + strand, within EX31_RS08370 at 178.779 kb on + strand, within EX31_RS08370 at 178.779 kb on + strand, within EX31_RS08370 at 178.780 kb on - strand, within EX31_RS08370 at 178.780 kb on - strand, within EX31_RS08370 at 178.780 kb on - strand, within EX31_RS08370 at 178.780 kb on - strand, within EX31_RS08370 at 178.780 kb on - strand, within EX31_RS08370 at 178.780 kb on - strand, within EX31_RS08370 at 178.780 kb on - strand, within EX31_RS08370 at 178.780 kb on - strand, within EX31_RS08370 at 178.824 kb on + strand, within EX31_RS08370 at 178.946 kb on + strand at 178.947 kb on - strand at 178.968 kb on - strand at 178.996 kb on - strand at 178.996 kb on - strand at 178.999 kb on - strand at 179.012 kb on + strand at 179.012 kb on + strand at 179.013 kb on - strand at 179.013 kb on - strand at 179.062 kb on - strand at 179.076 kb on + strand at 179.077 kb on - strand at 179.133 kb on + strand at 179.133 kb on + strand at 179.133 kb on + strand at 179.133 kb on + strand at 179.133 kb on + strand at 179.134 kb on - strand at 179.134 kb on - strand at 179.134 kb on - strand at 179.134 kb on - strand at 179.134 kb on - strand at 179.166 kb on + strand at 179.166 kb on + strand at 179.166 kb on + strand at 179.166 kb on + strand at 179.166 kb on + strand at 179.166 kb on + strand at 179.166 kb on + strand at 179.167 kb on - strand at 179.167 kb on - strand at 179.167 kb on - strand at 179.167 kb on - strand at 179.167 kb on - strand at 179.214 kb on + strand at 179.214 kb on + strand at 179.214 kb on + strand at 179.214 kb on + strand at 179.215 kb on - strand at 179.215 kb on - strand at 179.227 kb on + strand at 179.228 kb on - strand at 179.288 kb on - strand at 179.288 kb on - strand at 179.389 kb on + strand, within EX31_RS08375 at 179.399 kb on - strand, within EX31_RS08375 at 179.438 kb on + strand, within EX31_RS08375 at 179.467 kb on + strand, within EX31_RS08375 at 179.467 kb on + strand, within EX31_RS08375 at 179.467 kb on + strand, within EX31_RS08375 at 179.467 kb on + strand, within EX31_RS08375 at 179.468 kb on - strand, within EX31_RS08375 at 179.562 kb on + strand, within EX31_RS08375 at 179.562 kb on + strand, within EX31_RS08375 at 179.562 kb on + strand, within EX31_RS08375 at 179.563 kb on - strand, within EX31_RS08375 at 179.563 kb on - strand, within EX31_RS08375 at 179.679 kb on + strand, within EX31_RS08375 at 179.680 kb on - strand, within EX31_RS08375 at 179.758 kb on + strand, within EX31_RS08375 at 179.758 kb on + strand, within EX31_RS08375 at 179.758 kb on + strand, within EX31_RS08375 at 179.758 kb on + strand, within EX31_RS08375 at 179.889 kb on - strand, within EX31_RS08375
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 177,037 + -0.6 177,089 - EX31_RS08365 0.15 -0.3 177,155 + EX31_RS08365 0.24 +0.2 177,155 + EX31_RS08365 0.24 +0.5 177,156 - EX31_RS08365 0.24 +0.3 177,156 - EX31_RS08365 0.24 -1.4 177,156 - EX31_RS08365 0.24 +2.2 177,156 - EX31_RS08365 0.24 +0.9 177,258 + EX31_RS08365 0.37 -1.1 177,258 + EX31_RS08365 0.37 +0.3 177,258 + EX31_RS08365 0.37 +0.8 177,278 + EX31_RS08365 0.40 +0.5 177,300 - EX31_RS08365 0.43 -1.1 177,323 + EX31_RS08365 0.46 -0.1 177,451 + EX31_RS08365 0.63 +0.2 177,451 + EX31_RS08365 0.63 -1.2 177,452 - EX31_RS08365 0.63 -0.3 177,516 - EX31_RS08365 0.72 +0.3 177,578 + EX31_RS08365 0.80 +0.1 177,578 + EX31_RS08365 0.80 -0.7 177,578 + EX31_RS08365 0.80 -0.2 177,578 + EX31_RS08365 0.80 +0.2 177,578 + EX31_RS08365 0.80 -0.8 177,578 + EX31_RS08365 0.80 +0.2 177,579 - EX31_RS08365 0.80 +1.0 177,579 - EX31_RS08365 0.80 +0.1 177,579 - EX31_RS08365 0.80 +0.2 177,579 - EX31_RS08365 0.80 +1.0 177,579 - EX31_RS08365 0.80 -0.0 177,598 + EX31_RS08365 0.83 +0.3 177,613 + EX31_RS08365 0.85 +0.2 177,614 - EX31_RS08365 0.85 -1.2 177,618 + EX31_RS08365 0.86 -0.4 177,619 - EX31_RS08365 0.86 -0.5 177,619 - EX31_RS08365 0.86 +1.5 177,723 - -0.1 177,732 + -1.4 177,732 + +0.4 177,732 + +0.7 177,733 - -0.4 177,772 - +0.3 177,772 - +0.3 177,795 + +0.7 177,795 + -0.7 177,795 + -0.3 177,795 + +0.3 177,795 + +0.0 177,796 - +0.7 177,821 + +0.0 177,821 + +0.0 177,821 + +0.4 177,821 + -0.0 177,883 + +0.0 177,883 + +1.1 177,883 + +0.2 177,883 + -0.0 177,883 + -0.4 177,902 + +0.5 177,902 + -1.1 177,902 + +1.1 177,902 + +0.8 177,902 + +0.6 177,902 + +1.0 177,902 + +1.4 177,902 + -0.2 177,902 + +0.6 177,902 + +0.2 177,902 + +0.2 177,902 + +0.8 177,902 + +0.6 177,902 + +0.3 177,902 + -0.2 177,902 + +0.3 177,902 + -0.2 177,902 + +1.0 177,902 + +0.0 177,902 + +0.6 177,903 - +0.1 177,903 - -0.7 177,903 - -0.3 177,903 - -0.1 177,903 - +1.2 177,903 - -0.5 177,903 - +0.2 177,903 - -1.0 177,903 - -0.7 177,906 + +0.8 177,906 + +0.6 177,906 + +0.3 177,906 + +0.9 177,906 + +0.6 177,906 + +0.4 177,907 - +0.4 177,907 - +1.1 177,907 - +0.0 177,907 - +1.1 177,914 + +0.3 177,914 + +0.5 177,914 + +1.2 177,914 + +0.6 177,914 + -1.0 177,914 + -0.0 177,914 + -0.4 177,915 - -0.4 178,036 + -0.2 178,072 + +0.6 178,073 - +0.4 178,073 - +0.4 178,073 - +0.4 178,078 + +0.8 178,078 + +0.3 178,079 - -1.2 178,079 - -1.7 178,079 - -1.6 178,082 + +1.7 178,082 + -0.5 178,082 + -1.5 178,082 + -0.2 178,082 + -0.2 178,082 + +0.2 178,082 + -0.2 178,082 + +0.0 178,082 + +0.5 178,082 + -0.6 178,082 + +1.3 178,082 + +0.4 178,083 - +0.5 178,083 - -0.5 178,083 - -0.3 178,083 - +0.2 178,083 - +0.4 178,083 - +0.8 178,083 - +0.5 178,083 - -0.8 178,083 - +0.0 178,083 - -0.1 178,136 + EX31_RS08370 0.11 -0.4 178,137 - EX31_RS08370 0.11 -1.1 178,137 - EX31_RS08370 0.11 -0.2 178,137 - EX31_RS08370 0.11 +1.0 178,171 + EX31_RS08370 0.15 -0.5 178,209 + EX31_RS08370 0.19 +0.6 178,302 - EX31_RS08370 0.28 -0.0 178,332 + EX31_RS08370 0.31 +0.2 178,332 + EX31_RS08370 0.31 -0.6 178,332 + EX31_RS08370 0.31 -0.1 178,332 + EX31_RS08370 0.31 -0.6 178,333 - EX31_RS08370 0.32 -0.5 178,333 - EX31_RS08370 0.32 -2.1 178,333 - EX31_RS08370 0.32 +0.8 178,333 - EX31_RS08370 0.32 -1.3 178,333 - EX31_RS08370 0.32 -0.3 178,333 - EX31_RS08370 0.32 -0.3 178,366 + EX31_RS08370 0.35 +0.6 178,374 + EX31_RS08370 0.36 -0.4 178,374 + EX31_RS08370 0.36 -0.4 178,446 - EX31_RS08370 0.43 +0.2 178,459 - EX31_RS08370 0.45 -0.6 178,620 - EX31_RS08370 0.61 -0.5 178,631 + EX31_RS08370 0.62 -0.8 178,632 - EX31_RS08370 0.62 -0.8 178,655 + EX31_RS08370 0.65 +0.1 178,656 - EX31_RS08370 0.65 -0.8 178,656 - EX31_RS08370 0.65 +0.3 178,779 + EX31_RS08370 0.77 +0.1 178,779 + EX31_RS08370 0.77 +0.7 178,779 + EX31_RS08370 0.77 -0.6 178,779 + EX31_RS08370 0.77 -1.4 178,779 + EX31_RS08370 0.77 -0.7 178,779 + EX31_RS08370 0.77 -0.5 178,779 + EX31_RS08370 0.77 -0.6 178,780 - EX31_RS08370 0.78 -1.8 178,780 - EX31_RS08370 0.78 -0.1 178,780 - EX31_RS08370 0.78 -0.3 178,780 - EX31_RS08370 0.78 +0.3 178,780 - EX31_RS08370 0.78 -1.5 178,780 - EX31_RS08370 0.78 -0.7 178,780 - EX31_RS08370 0.78 -0.0 178,780 - EX31_RS08370 0.78 +0.8 178,824 + EX31_RS08370 0.82 +1.4 178,946 + +0.1 178,947 - +0.7 178,968 - -0.6 178,996 - +0.8 178,996 - -0.2 178,999 - -0.6 179,012 + +0.3 179,012 + +0.5 179,013 - -0.3 179,013 - +0.2 179,062 - -0.0 179,076 + +0.6 179,077 - +0.3 179,133 + -1.3 179,133 + -0.8 179,133 + +1.0 179,133 + -0.1 179,133 + -0.2 179,134 - -0.5 179,134 - -1.5 179,134 - -0.0 179,134 - +0.0 179,134 - -1.0 179,166 + +0.7 179,166 + -0.3 179,166 + -0.9 179,166 + +0.5 179,166 + +0.1 179,166 + +0.6 179,166 + -1.1 179,167 - +0.3 179,167 - -0.1 179,167 - +0.9 179,167 - -0.1 179,167 - -0.7 179,214 + -0.0 179,214 + +1.3 179,214 + -0.7 179,214 + +0.4 179,215 - -0.4 179,215 - +0.3 179,227 + -0.3 179,228 - -0.2 179,288 - +0.2 179,288 - -0.4 179,389 + EX31_RS08375 0.12 +0.4 179,399 - EX31_RS08375 0.12 +0.2 179,438 + EX31_RS08375 0.13 -1.4 179,467 + EX31_RS08375 0.15 +0.7 179,467 + EX31_RS08375 0.15 +0.3 179,467 + EX31_RS08375 0.15 -0.5 179,467 + EX31_RS08375 0.15 -0.6 179,468 - EX31_RS08375 0.15 +0.1 179,562 + EX31_RS08375 0.18 -0.3 179,562 + EX31_RS08375 0.18 -1.8 179,562 + EX31_RS08375 0.18 -1.5 179,563 - EX31_RS08375 0.18 +0.3 179,563 - EX31_RS08375 0.18 +0.2 179,679 + EX31_RS08375 0.22 -0.3 179,680 - EX31_RS08375 0.22 -0.2 179,758 + EX31_RS08375 0.25 +0.6 179,758 + EX31_RS08375 0.25 +0.5 179,758 + EX31_RS08375 0.25 -0.4 179,758 + EX31_RS08375 0.25 +0.2 179,889 - EX31_RS08375 0.30 +0.4
Or see this region's nucleotide sequence