Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS24020 and EX31_RS24025 are separated by 320 nucleotides EX31_RS24025 and EX31_RS24030 overlap by 8 nucleotides
EX31_RS24020: EX31_RS24020 - ATP-binding cassette domain-containing protein, at 571,298 to 572,779
_RS24020
EX31_RS24025: EX31_RS24025 - VOC family protein, at 573,100 to 573,960
_RS24025
EX31_RS24030: EX31_RS24030 - alkylhydroperoxidase domain protein, at 573,953 to 575,062
_RS24030
Position (kb) 573
574 Strain fitness (log2 ratio) -2
-1
0
1
2 at 572.164 kb on + strand, within EX31_RS24020 at 572.165 kb on - strand, within EX31_RS24020 at 572.165 kb on - strand, within EX31_RS24020 at 572.206 kb on + strand, within EX31_RS24020 at 572.206 kb on + strand, within EX31_RS24020 at 572.207 kb on - strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.211 kb on - strand, within EX31_RS24020 at 572.320 kb on + strand, within EX31_RS24020 at 572.320 kb on + strand, within EX31_RS24020 at 572.321 kb on - strand, within EX31_RS24020 at 572.321 kb on - strand, within EX31_RS24020 at 572.455 kb on + strand, within EX31_RS24020 at 572.456 kb on - strand, within EX31_RS24020 at 572.456 kb on - strand, within EX31_RS24020 at 572.456 kb on - strand, within EX31_RS24020 at 572.456 kb on - strand, within EX31_RS24020 at 572.557 kb on + strand, within EX31_RS24020 at 572.590 kb on + strand, within EX31_RS24020 at 572.629 kb on - strand, within EX31_RS24020 at 572.693 kb on + strand at 572.694 kb on - strand at 572.770 kb on + strand at 572.770 kb on + strand at 572.770 kb on + strand at 572.770 kb on + strand at 572.770 kb on + strand at 572.771 kb on - strand at 572.771 kb on - strand at 572.773 kb on + strand at 572.773 kb on + strand at 572.774 kb on - strand at 572.815 kb on + strand at 572.815 kb on + strand at 572.815 kb on + strand at 572.818 kb on + strand at 572.818 kb on + strand at 572.819 kb on - strand at 572.819 kb on - strand at 572.819 kb on - strand at 572.867 kb on - strand at 572.877 kb on + strand at 572.878 kb on - strand at 572.878 kb on - strand at 572.882 kb on + strand at 572.883 kb on - strand at 572.894 kb on + strand at 572.894 kb on + strand at 572.895 kb on - strand at 572.895 kb on - strand at 572.907 kb on - strand at 572.915 kb on + strand at 572.916 kb on - strand at 572.919 kb on + strand at 572.919 kb on + strand at 572.919 kb on + strand at 572.919 kb on + strand at 572.920 kb on - strand at 572.920 kb on - strand at 572.920 kb on - strand at 572.920 kb on - strand at 572.935 kb on + strand at 573.052 kb on - strand at 573.052 kb on - strand at 573.052 kb on - strand at 573.052 kb on - strand at 573.181 kb on + strand at 573.181 kb on + strand at 573.182 kb on - strand at 573.182 kb on - strand at 573.182 kb on - strand at 573.398 kb on + strand, within EX31_RS24025 at 573.399 kb on - strand, within EX31_RS24025 at 573.400 kb on + strand, within EX31_RS24025 at 573.400 kb on + strand, within EX31_RS24025 at 573.400 kb on + strand, within EX31_RS24025 at 573.401 kb on - strand, within EX31_RS24025 at 573.401 kb on - strand, within EX31_RS24025 at 573.401 kb on - strand, within EX31_RS24025 at 573.401 kb on - strand, within EX31_RS24025 at 573.401 kb on - strand, within EX31_RS24025 at 573.668 kb on + strand, within EX31_RS24025 at 573.669 kb on - strand, within EX31_RS24025 at 573.811 kb on - strand, within EX31_RS24025 at 574.049 kb on + strand at 574.050 kb on - strand at 574.258 kb on - strand, within EX31_RS24030 at 574.261 kb on + strand, within EX31_RS24030 at 574.261 kb on + strand, within EX31_RS24030 at 574.261 kb on + strand, within EX31_RS24030 at 574.261 kb on + strand, within EX31_RS24030 at 574.261 kb on + strand, within EX31_RS24030 at 574.261 kb on + strand, within EX31_RS24030 at 574.332 kb on + strand, within EX31_RS24030 at 574.332 kb on + strand, within EX31_RS24030 at 574.333 kb on - strand, within EX31_RS24030 at 574.333 kb on - strand, within EX31_RS24030 at 574.376 kb on + strand, within EX31_RS24030 at 574.402 kb on - strand, within EX31_RS24030 at 574.414 kb on + strand, within EX31_RS24030 at 574.511 kb on - strand, within EX31_RS24030 at 574.583 kb on - strand, within EX31_RS24030 at 574.583 kb on - strand, within EX31_RS24030 at 574.623 kb on + strand, within EX31_RS24030 at 574.844 kb on - strand, within EX31_RS24030 at 574.947 kb on + strand, within EX31_RS24030
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 572,164 + EX31_RS24020 0.58 +1.9 572,165 - EX31_RS24020 0.59 +0.4 572,165 - EX31_RS24020 0.59 -0.7 572,206 + EX31_RS24020 0.61 +0.0 572,206 + EX31_RS24020 0.61 -0.1 572,207 - EX31_RS24020 0.61 -0.8 572,210 + EX31_RS24020 0.62 +0.8 572,210 + EX31_RS24020 0.62 +0.1 572,210 + EX31_RS24020 0.62 +0.5 572,210 + EX31_RS24020 0.62 +0.8 572,210 + EX31_RS24020 0.62 +0.9 572,211 - EX31_RS24020 0.62 -0.9 572,320 + EX31_RS24020 0.69 -0.4 572,320 + EX31_RS24020 0.69 -0.5 572,321 - EX31_RS24020 0.69 -0.5 572,321 - EX31_RS24020 0.69 -0.6 572,455 + EX31_RS24020 0.78 -0.4 572,456 - EX31_RS24020 0.78 +1.5 572,456 - EX31_RS24020 0.78 -0.4 572,456 - EX31_RS24020 0.78 +0.2 572,456 - EX31_RS24020 0.78 -0.4 572,557 + EX31_RS24020 0.85 +0.3 572,590 + EX31_RS24020 0.87 -0.3 572,629 - EX31_RS24020 0.90 -0.5 572,693 + -1.2 572,694 - -0.7 572,770 + -1.6 572,770 + -0.1 572,770 + +0.2 572,770 + -0.3 572,770 + +0.8 572,771 - +0.2 572,771 - -0.7 572,773 + +0.2 572,773 + +0.3 572,774 - -0.2 572,815 + +0.1 572,815 + +0.5 572,815 + -0.9 572,818 + -1.0 572,818 + -1.9 572,819 - -0.4 572,819 - +0.3 572,819 - +0.3 572,867 - -0.3 572,877 + +0.2 572,878 - +0.8 572,878 - +0.1 572,882 + +0.0 572,883 - -0.7 572,894 + -0.6 572,894 + -0.3 572,895 - +0.8 572,895 - +0.5 572,907 - -1.6 572,915 + -0.9 572,916 - +1.5 572,919 + -0.0 572,919 + -0.3 572,919 + +1.1 572,919 + -0.2 572,920 - -1.7 572,920 - +0.5 572,920 - -2.1 572,920 - +0.2 572,935 + -0.7 573,052 - +0.1 573,052 - -0.8 573,052 - +0.8 573,052 - +2.3 573,181 + -1.0 573,181 + +0.4 573,182 - -0.7 573,182 - -0.3 573,182 - +0.4 573,398 + EX31_RS24025 0.35 +0.6 573,399 - EX31_RS24025 0.35 -0.2 573,400 + EX31_RS24025 0.35 +0.0 573,400 + EX31_RS24025 0.35 -0.9 573,400 + EX31_RS24025 0.35 -1.8 573,401 - EX31_RS24025 0.35 -0.8 573,401 - EX31_RS24025 0.35 -0.7 573,401 - EX31_RS24025 0.35 +0.1 573,401 - EX31_RS24025 0.35 -0.6 573,401 - EX31_RS24025 0.35 -0.7 573,668 + EX31_RS24025 0.66 -0.0 573,669 - EX31_RS24025 0.66 +0.8 573,811 - EX31_RS24025 0.83 +0.2 574,049 + -0.1 574,050 - -0.6 574,258 - EX31_RS24030 0.27 +0.9 574,261 + EX31_RS24030 0.28 +0.4 574,261 + EX31_RS24030 0.28 +0.2 574,261 + EX31_RS24030 0.28 +0.3 574,261 + EX31_RS24030 0.28 -0.5 574,261 + EX31_RS24030 0.28 -0.6 574,261 + EX31_RS24030 0.28 -0.9 574,332 + EX31_RS24030 0.34 -0.1 574,332 + EX31_RS24030 0.34 +0.7 574,333 - EX31_RS24030 0.34 -0.1 574,333 - EX31_RS24030 0.34 -0.8 574,376 + EX31_RS24030 0.38 +0.7 574,402 - EX31_RS24030 0.40 -0.7 574,414 + EX31_RS24030 0.42 -0.4 574,511 - EX31_RS24030 0.50 -1.6 574,583 - EX31_RS24030 0.57 +0.6 574,583 - EX31_RS24030 0.57 +1.2 574,623 + EX31_RS24030 0.60 +0.7 574,844 - EX31_RS24030 0.80 +0.5 574,947 + EX31_RS24030 0.90 -0.8
Or see this region's nucleotide sequence