Strain Fitness in Rahnella sp. WP5

Strain Fitness in Rahnella sp. WP5 around EX31_RS04495

Experiment: NLN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NLN
				remove
7,618	+	EX31_RS04485	0.60	-0.2
7,619	-	EX31_RS04485	0.60	+0.6
7,619	-	EX31_RS04485	0.60	-0.6
7,647	+	EX31_RS04485	0.65	+0.3
7,647	+	EX31_RS04485	0.65	-0.1
7,647	+	EX31_RS04485	0.65	-1.4
7,647	+	EX31_RS04485	0.65	-1.8
7,647	+	EX31_RS04485	0.65	-0.6
7,647	+	EX31_RS04485	0.65	+1.1
7,648	-	EX31_RS04485	0.65	-0.5
7,648	-	EX31_RS04485	0.65	+0.3
7,657	-	EX31_RS04485	0.67	-0.2
7,679	+	EX31_RS04485	0.70	-0.9
7,679	+	EX31_RS04485	0.70	+0.2
7,679	+	EX31_RS04485	0.70	-0.6
7,680	-	EX31_RS04485	0.70	-0.3
7,680	-	EX31_RS04485	0.70	-0.8
7,680	-	EX31_RS04485	0.70	-0.7
7,680	-	EX31_RS04485	0.70	-0.3
7,680	-	EX31_RS04485	0.70	-0.0
7,680	-	EX31_RS04485	0.70	+0.7
7,680	-	EX31_RS04485	0.70	+0.0
7,680	-	EX31_RS04485	0.70	-1.9
7,680	-	EX31_RS04485	0.70	-0.0
7,680	-	EX31_RS04485	0.70	+0.6
7,680	-	EX31_RS04485	0.70	+0.1
7,680	-	EX31_RS04485	0.70	-0.4
7,680	-	EX31_RS04485	0.70	-0.7
7,680	-	EX31_RS04485	0.70	+0.1
7,688	+	EX31_RS04485	0.72	-0.5
7,688	+	EX31_RS04485	0.72	-0.9
7,688	+	EX31_RS04485	0.72	-0.5
7,688	+	EX31_RS04485	0.72	-1.2
7,688	+	EX31_RS04485	0.72	-0.0
7,688	+	EX31_RS04485	0.72	-0.5
7,688	+	EX31_RS04485	0.72	+0.4
7,688	+	EX31_RS04485	0.72	-0.3
7,689	-	EX31_RS04485	0.72	+0.4
7,689	-	EX31_RS04485	0.72	-0.3
7,759	-	EX31_RS04485	0.83	-0.9
7,759	-	EX31_RS04485	0.83	-0.2
7,810	+			-0.0
7,810	+			-0.0
7,810	+			-1.2
7,810	+			-0.2
7,811	-			-0.8
7,811	-			-0.5
7,814	+			+0.0
7,814	+			+0.4
7,814	+			-0.3
7,815	-			+0.4
7,815	-			-0.4
7,815	-			-0.3
7,821	+			-0.7
7,821	+			-0.1
7,850	+			-1.0
7,861	+			-0.6
7,861	+			-0.8
7,862	-			+0.0
7,862	-			-0.3
7,862	-			+0.3
7,862	-			-0.2
7,868	+			-0.1
7,869	-			+0.3
7,869	-			-0.6
7,907	+			+0.2
7,907	+			-0.6
7,907	+			-0.1
7,908	-			-0.7
7,908	-			+0.5
7,932	+			-0.6
7,932	+			-0.7
7,933	-			+0.3
7,933	-			+0.4
7,933	-			+1.0
7,986	-			+1.3
8,003	+			-0.2
8,003	+			-0.1
8,004	-			+0.3
8,024	+			-1.3
8,024	+			-0.9
8,024	+			-1.6
8,025	-			-0.3
8,027	+			-0.2
8,027	+			-0.5
8,027	+			+0.1
8,027	+			-0.3
8,028	-			-0.3
8,028	-			-0.0
8,052	+			+0.7
8,053	-			+0.3
8,058	+			-0.3
8,059	-			+0.1
8,059	-			+0.6
8,059	-			+0.0
8,059	-			+0.1
8,075	-			-0.0
8,075	-			-0.7
8,075	-			+0.1
8,075	-			-0.5
8,186	+	EX31_RS04490	0.63	+1.7
8,187	-	EX31_RS04490	0.64	-1.2
8,197	+	EX31_RS04490	0.69	+0.1
8,197	+	EX31_RS04490	0.69	-0.2
8,197	+	EX31_RS04490	0.69	+0.1
8,197	+	EX31_RS04490	0.69	+1.6
8,197	+	EX31_RS04490	0.69	+0.1
8,198	-	EX31_RS04490	0.69	+0.3
8,198	-	EX31_RS04490	0.69	-0.9
8,209	+	EX31_RS04490	0.75	+0.9
8,209	+	EX31_RS04490	0.75	-0.9
8,209	+	EX31_RS04490	0.75	-0.3
8,209	+	EX31_RS04490	0.75	+0.1
8,210	-	EX31_RS04490	0.75	+0.1
8,210	-	EX31_RS04490	0.75	+0.4
8,210	-	EX31_RS04490	0.75	-0.2
8,210	-	EX31_RS04490	0.75	+0.1
8,210	-	EX31_RS04490	0.75	+0.3
8,254	+			-0.2
8,254	+			+1.1
8,254	+			-0.3
8,255	-			-0.6
8,255	-			+0.2
8,255	-			-0.3
8,255	-			+0.5
8,263	+			+0.2
8,263	+			-0.1
8,263	+			+0.0
8,263	+			-0.2
8,263	+			-0.5
8,263	+			+0.3
8,263	+			+0.0
8,263	+			-0.4
8,264	-			-0.0
8,264	-			+0.2
8,264	-			-0.1
8,264	-			+0.4
8,264	-			-0.2
8,264	-			+0.3
8,264	-			+0.3
8,264	-			+0.1
8,264	-			+0.1
8,264	-			+0.1
8,264	-			+1.0
8,264	-			+0.4
8,264	-			-0.1
8,264	-			-0.1
8,264	-			-0.1
8,264	-			+0.6
8,381	-			-0.5
8,524	-	EX31_RS04495	0.10	+0.9
8,584	+	EX31_RS04495	0.14	-0.5
8,613	-	EX31_RS04495	0.15	+0.2
8,696	+	EX31_RS04495	0.20	+0.1
8,697	-	EX31_RS04495	0.20	+0.8
8,697	-	EX31_RS04495	0.20	+1.7
8,697	-	EX31_RS04495	0.20	-0.3
8,697	-	EX31_RS04495	0.20	-0.1
8,697	-	EX31_RS04495	0.20	+0.4
8,716	+	EX31_RS04495	0.21	-0.1
8,716	+	EX31_RS04495	0.21	-0.6
8,716	+	EX31_RS04495	0.21	+0.3
8,716	+	EX31_RS04495	0.21	+0.5
8,716	+	EX31_RS04495	0.21	+0.3
8,716	+	EX31_RS04495	0.21	+0.4
8,717	-	EX31_RS04495	0.21	+0.9
8,717	-	EX31_RS04495	0.21	+0.4
8,717	-	EX31_RS04495	0.21	+0.1
8,717	-	EX31_RS04495	0.21	+0.0
8,737	+	EX31_RS04495	0.22	-1.3
8,737	+	EX31_RS04495	0.22	-0.4
8,737	+	EX31_RS04495	0.22	-0.4
8,737	+	EX31_RS04495	0.22	-0.6
8,738	-	EX31_RS04495	0.22	-1.3
8,738	-	EX31_RS04495	0.22	+0.1
8,738	-	EX31_RS04495	0.22	+0.4
8,740	+	EX31_RS04495	0.22	-0.1
8,740	+	EX31_RS04495	0.22	-0.1
8,740	+	EX31_RS04495	0.22	+1.4
8,741	-	EX31_RS04495	0.22	-0.1
8,741	-	EX31_RS04495	0.22	+0.3
8,780	+	EX31_RS04495	0.24	-0.2
8,780	+	EX31_RS04495	0.24	+1.1
8,780	+	EX31_RS04495	0.24	+0.2
8,805	+	EX31_RS04495	0.26	+0.5
8,805	+	EX31_RS04495	0.26	-0.8
8,806	-	EX31_RS04495	0.26	+0.2
8,808	+	EX31_RS04495	0.26	+0.6
8,808	+	EX31_RS04495	0.26	+0.1
8,808	+	EX31_RS04495	0.26	-0.7
8,808	+	EX31_RS04495	0.26	-0.2
8,808	+	EX31_RS04495	0.26	+0.0
8,809	-	EX31_RS04495	0.26	-0.0
8,809	-	EX31_RS04495	0.26	+0.2
8,818	-	EX31_RS04495	0.26	+1.0
8,824	-	EX31_RS04495	0.27	-1.2
8,870	-	EX31_RS04495	0.29	+0.7
8,870	-	EX31_RS04495	0.29	+0.3
8,935	+	EX31_RS04495	0.33	-0.3
8,935	+	EX31_RS04495	0.33	+0.4
8,935	+	EX31_RS04495	0.33	+1.1
8,935	+	EX31_RS04495	0.33	-0.7
8,935	+	EX31_RS04495	0.33	+0.1
8,935	+	EX31_RS04495	0.33	+0.6
8,936	-	EX31_RS04495	0.33	+0.4
8,998	-	EX31_RS04495	0.36	+0.4
9,057	-	EX31_RS04495	0.40	+0.5
9,203	+	EX31_RS04495	0.48	-0.1
9,203	+	EX31_RS04495	0.48	-0.4
9,203	+	EX31_RS04495	0.48	+0.2
9,204	-	EX31_RS04495	0.48	+0.3
9,204	-	EX31_RS04495	0.48	+0.6
9,219	+	EX31_RS04495	0.49	-0.1
9,219	+	EX31_RS04495	0.49	+0.1
9,219	+	EX31_RS04495	0.49	+0.5
9,236	+	EX31_RS04495	0.50	+0.5
9,236	+	EX31_RS04495	0.50	+0.7
9,236	+	EX31_RS04495	0.50	-0.5
9,237	-	EX31_RS04495	0.50	-0.8
9,277	+	EX31_RS04495	0.52	-0.2
9,277	+	EX31_RS04495	0.52	+0.1
9,277	+	EX31_RS04495	0.52	+0.4
9,278	-	EX31_RS04495	0.52	+0.2
9,284	-	EX31_RS04495	0.52	+0.4
9,284	-	EX31_RS04495	0.52	+0.0
9,285	+	EX31_RS04495	0.52	-0.3
9,286	-	EX31_RS04495	0.52	+0.2
9,286	-	EX31_RS04495	0.52	+0.1
9,286	-	EX31_RS04495	0.52	-0.1
9,286	-	EX31_RS04495	0.52	-0.2
9,286	-	EX31_RS04495	0.52	-0.8
9,286	-	EX31_RS04495	0.52	-0.0
9,286	-	EX31_RS04495	0.52	+0.1
9,286	-	EX31_RS04495	0.52	+0.3
9,322	+	EX31_RS04495	0.54	-0.3
9,322	+	EX31_RS04495	0.54	-0.1
9,323	-	EX31_RS04495	0.54	+0.5
9,349	+	EX31_RS04495	0.56	+0.2
9,349	+	EX31_RS04495	0.56	+0.4
9,384	+	EX31_RS04495	0.58	-0.8
9,401	+	EX31_RS04495	0.59	-0.3
9,448	+	EX31_RS04495	0.61	-0.4
9,449	-	EX31_RS04495	0.61	+0.6
9,553	-	EX31_RS04495	0.67	+0.7
9,613	+	EX31_RS04495	0.70	+0.4
9,613	+	EX31_RS04495	0.70	+0.2
9,613	+	EX31_RS04495	0.70	+0.5
9,613	+	EX31_RS04495	0.70	+0.5
9,614	-	EX31_RS04495	0.70	+0.1
9,614	-	EX31_RS04495	0.70	+0.9
9,677	-	EX31_RS04495	0.74	+0.2
9,828	+	EX31_RS04495	0.82	-0.3
9,829	-	EX31_RS04495	0.82	+0.6
9,829	-	EX31_RS04495	0.82	+0.4
9,829	-	EX31_RS04495	0.82	+0.4
9,829	-	EX31_RS04495	0.82	+0.0
9,829	-	EX31_RS04495	0.82	+0.7
9,913	+	EX31_RS04495	0.87	-0.9
9,940	+	EX31_RS04495	0.89	+1.6
9,941	+	EX31_RS04495	0.89	+0.6
9,941	-	EX31_RS04495	0.89	+1.0
10,007	+			+0.8
10,007	+			+0.5
10,007	+			+1.4
10,007	+			+0.9
10,007	+			-0.4
10,007	+			+0.4
10,064	-			-0.2
10,067	+			-0.3
10,067	+			-0.1
10,067	+			-0.3
10,067	+			+0.3
10,068	-			+0.7
10,106	+			+0.2
10,132	+			+0.3
10,132	+			-0.1
10,133	-			-0.6
10,133	-			+0.3
10,133	-			+0.1
10,133	-			-0.0
10,133	-			+1.0
10,133	-			-0.4
10,133	-			+0.3
10,244	+	EX31_RS04500	0.17	-0.7
10,244	+	EX31_RS04500	0.17	-0.5
10,244	+	EX31_RS04500	0.17	-0.9
10,244	+	EX31_RS04500	0.17	+0.2
10,244	+	EX31_RS04500	0.17	-0.3
10,245	-	EX31_RS04500	0.18	-0.6
10,245	-	EX31_RS04500	0.18	+0.4
10,248	+	EX31_RS04500	0.18	+0.8
10,272	+	EX31_RS04500	0.23	-0.4
10,272	+	EX31_RS04500	0.23	-0.2
10,272	+	EX31_RS04500	0.23	-0.9
10,272	+	EX31_RS04500	0.23	+1.5
10,272	+	EX31_RS04500	0.23	+0.2
10,272	+	EX31_RS04500	0.23	-0.2
10,273	-	EX31_RS04500	0.23	+0.1
10,273	-	EX31_RS04500	0.23	+0.4
10,273	-	EX31_RS04500	0.23	+2.6
10,273	-	EX31_RS04500	0.23	-0.0
10,273	-	EX31_RS04500	0.23	-0.5
10,309	-	EX31_RS04500	0.29	+0.7
10,309	-	EX31_RS04500	0.29	-0.4
10,309	-	EX31_RS04500	0.29	-0.3
10,332	+	EX31_RS04500	0.33	-0.6
10,333	-	EX31_RS04500	0.34	+1.2
10,391	+	EX31_RS04500	0.44	-0.1
10,392	-	EX31_RS04500	0.44	-0.1
10,484	+	EX31_RS04500	0.61	+0.4
10,484	+	EX31_RS04500	0.61	+0.1
10,484	+	EX31_RS04500	0.61	-0.9
10,484	+	EX31_RS04500	0.61	-0.0
10,484	+	EX31_RS04500	0.61	+0.6
10,484	+	EX31_RS04500	0.61	-0.1
10,484	+	EX31_RS04500	0.61	+0.4
10,484	+	EX31_RS04500	0.61	-0.1
10,484	+	EX31_RS04500	0.61	+0.0
10,485	-	EX31_RS04500	0.61	+0.5
10,485	-	EX31_RS04500	0.61	+0.1
10,485	-	EX31_RS04500	0.61	+0.3
10,485	-	EX31_RS04500	0.61	-0.3
10,485	-	EX31_RS04500	0.61	+1.1
10,485	-	EX31_RS04500	0.61	+0.6
10,485	-	EX31_RS04500	0.61	-2.0
10,485	-	EX31_RS04500	0.61	+0.0
10,485	-	EX31_RS04500	0.61	+1.1
10,485	-	EX31_RS04500	0.61	+0.2
10,485	-	EX31_RS04500	0.61	+0.6
10,485	-	EX31_RS04500	0.61	-0.0
10,485	-	EX31_RS04500	0.61	+0.2
10,488	+	EX31_RS04500	0.61	-0.4
10,488	+	EX31_RS04500	0.61	-0.4
10,488	+	EX31_RS04500	0.61	+0.7
10,488	+	EX31_RS04500	0.61	-0.0
10,489	-	EX31_RS04500	0.62	-0.7
10,489	-	EX31_RS04500	0.62	+0.7
10,489	-	EX31_RS04500	0.62	+0.0
10,489	-	EX31_RS04500	0.62	+0.3
10,489	-	EX31_RS04500	0.62	+0.6
10,489	-	EX31_RS04500	0.62	+0.0
10,489	-	EX31_RS04500	0.62	-0.7
10,490	+	EX31_RS04500	0.62	+0.2
10,490	+	EX31_RS04500	0.62	-1.2
10,490	+	EX31_RS04500	0.62	+0.7
10,491	-	EX31_RS04500	0.62	+0.5
10,491	-	EX31_RS04500	0.62	-1.5
10,491	-	EX31_RS04500	0.62	+0.1
10,551	+	EX31_RS04500	0.73	-0.2
10,571	+	EX31_RS04500	0.76	-0.2
10,571	+	EX31_RS04500	0.76	-0.2
10,625	-	EX31_RS04500	0.86	-0.1
10,625	-	EX31_RS04500	0.86	+1.5
10,670	+			+1.0
10,670	+			+0.1
10,670	+			-0.4
10,670	+			+0.6
10,670	+			+1.0
10,670	+			-0.2
10,671	-			-0.4
10,671	-			+0.9
10,671	-			+0.5
10,671	-			+0.3
10,705	+			-3.7
10,705	+			-1.1
10,705	+			+0.2
10,706	-			+0.0
10,706	-			-0.3
10,706	-			-0.6
10,706	-			+0.5
10,741	+			-2.2
10,742	-			+0.1
10,774	+			-0.5
10,775	-			+0.1
10,775	-			-0.8
10,775	-			+0.3
10,785	+			+0.1
10,785	+			-0.0
10,785	+			+0.0
10,785	+			+0.4
10,786	-			-0.1
10,786	-			+0.3
10,786	-			-0.6
10,786	-			-0.4
10,786	-			-0.4
10,793	+			-0.8
10,793	+			+0.7
10,806	+			-0.0
10,806	+			-0.1
10,806	+			+0.1
10,806	+			-1.3
10,806	+			-1.8
10,806	+			+0.3
10,807	-			+0.0
10,807	-			+0.9
10,811	+			-0.7
10,811	+			+0.3
10,812	-			-0.5
10,812	-			-0.5
10,830	+			+0.5
10,830	+			+0.1
10,831	-			+0.2
10,850	+			-1.0
10,850	+			+0.1
10,850	+			+1.0
10,850	+			+0.2
10,851	-			+0.6
10,851	-			-0.4
10,851	-			+0.7
10,869	+			-0.7
10,870	-			-0.1
10,947	+			-0.3
10,948	-			+0.7
10,971	+			-0.0
10,971	+			+1.7
10,972	-			-0.6
10,972	-			+0.9
10,972	-			+0.4
11,077	+	EX31_RS04505	0.13	+0.4
11,077	+	EX31_RS04505	0.13	-0.2
11,077	+	EX31_RS04505	0.13	-0.3
11,077	+	EX31_RS04505	0.13	+0.1
11,077	+	EX31_RS04505	0.13	+0.3
11,077	+	EX31_RS04505	0.13	-0.9
11,077	+	EX31_RS04505	0.13	+0.4
11,077	+	EX31_RS04505	0.13	+0.1
11,077	+	EX31_RS04505	0.13	+0.3
11,077	+	EX31_RS04505	0.13	+0.2
11,077	+	EX31_RS04505	0.13	+1.2
11,077	+	EX31_RS04505	0.13	+0.2
11,077	+	EX31_RS04505	0.13	-0.4
11,077	+	EX31_RS04505	0.13	-0.2
11,077	+	EX31_RS04505	0.13	+0.5
11,077	+	EX31_RS04505	0.13	-0.2
11,077	+	EX31_RS04505	0.13	+0.7
11,077	+	EX31_RS04505	0.13	-0.3
11,077	+	EX31_RS04505	0.13	+0.8
11,077	+	EX31_RS04505	0.13	-0.1
11,077	+	EX31_RS04505	0.13	+0.3
11,077	+	EX31_RS04505	0.13	-0.6
11,077	+	EX31_RS04505	0.13	-0.3
11,077	+	EX31_RS04505	0.13	-0.2
11,077	+	EX31_RS04505	0.13	+0.3
11,077	+	EX31_RS04505	0.13	-0.3
11,077	+	EX31_RS04505	0.13	+0.3
11,077	+	EX31_RS04505	0.13	+1.0
11,077	+	EX31_RS04505	0.13	+0.7
11,077	+	EX31_RS04505	0.13	+0.2
11,077	+	EX31_RS04505	0.13	+0.7
11,077	+	EX31_RS04505	0.13	-0.9
11,077	+	EX31_RS04505	0.13	-0.2
11,077	+	EX31_RS04505	0.13	-0.0
11,077	+	EX31_RS04505	0.13	-0.3
11,077	+	EX31_RS04505	0.13	+0.4
11,077	+	EX31_RS04505	0.13	+0.3
11,077	+	EX31_RS04505	0.13	-0.1
11,077	+	EX31_RS04505	0.13	+0.1
11,077	+	EX31_RS04505	0.13	+0.3
11,077	+	EX31_RS04505	0.13	+0.2
11,078	-	EX31_RS04505	0.13	-0.3
11,078	-	EX31_RS04505	0.13	+0.2
11,078	-	EX31_RS04505	0.13	-0.0
11,078	-	EX31_RS04505	0.13	-0.2
11,078	-	EX31_RS04505	0.13	-1.7
11,078	-	EX31_RS04505	0.13	-0.7
11,078	-	EX31_RS04505	0.13	+0.5
11,078	-	EX31_RS04505	0.13	-0.0
11,078	-	EX31_RS04505	0.13	-0.0
11,078	-	EX31_RS04505	0.13	+0.6
11,078	-	EX31_RS04505	0.13	-1.0
11,078	-	EX31_RS04505	0.13	+0.3
11,078	-	EX31_RS04505	0.13	-0.3
11,078	-	EX31_RS04505	0.13	+0.0
11,078	-	EX31_RS04505	0.13	-0.4
11,078	-	EX31_RS04505	0.13	-0.2
11,078	-	EX31_RS04505	0.13	-0.0
11,078	-	EX31_RS04505	0.13	-0.6
11,078	-	EX31_RS04505	0.13	-0.2
11,078	-	EX31_RS04505	0.13	+0.5
11,078	-	EX31_RS04505	0.13	-0.4
11,078	-	EX31_RS04505	0.13	+0.1
11,078	-	EX31_RS04505	0.13	-0.5
11,078	-	EX31_RS04505	0.13	-0.2
11,078	-	EX31_RS04505	0.13	-0.6
11,078	-	EX31_RS04505	0.13	-0.2
11,078	-	EX31_RS04505	0.13	-0.1
11,078	-	EX31_RS04505	0.13	-0.3
11,078	-	EX31_RS04505	0.13	-0.0
11,078	-	EX31_RS04505	0.13	-0.0
11,078	-	EX31_RS04505	0.13	-0.2
11,078	-	EX31_RS04505	0.13	+0.2
11,078	-	EX31_RS04505	0.13	-0.3
11,078	-	EX31_RS04505	0.13	+0.5
11,078	-	EX31_RS04505	0.13	-0.0
11,078	-	EX31_RS04505	0.13	-0.9
11,078	-	EX31_RS04505	0.13	-0.8
11,078	-	EX31_RS04505	0.13	+0.0
11,078	-	EX31_RS04505	0.13	-0.2
11,078	-	EX31_RS04505	0.13	+0.1
11,078	-	EX31_RS04505	0.13	-0.5

Or see this region's nucleotide sequence