Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS13825 and EX31_RS26010 are separated by 165 nucleotides EX31_RS26010 and EX31_RS13830 are separated by 303 nucleotides
EX31_RS13825: EX31_RS13825 - C40 family peptidase, at 23,333 to 24,232
_RS13825
EX31_RS26010: EX31_RS26010 - YnhF family membrane protein, at 24,398 to 24,517
_RS26010
EX31_RS13830: EX31_RS13830 - HTH-type transcriptional repressor PurR, at 24,821 to 25,846
_RS13830
Position (kb) 24
25 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 23.431 kb on + strand, within EX31_RS13825 at 23.443 kb on + strand, within EX31_RS13825 at 23.443 kb on + strand, within EX31_RS13825 at 23.509 kb on + strand, within EX31_RS13825 at 23.509 kb on + strand, within EX31_RS13825 at 23.566 kb on + strand, within EX31_RS13825 at 23.734 kb on + strand, within EX31_RS13825 at 23.735 kb on - strand, within EX31_RS13825 at 23.747 kb on + strand, within EX31_RS13825 at 23.748 kb on - strand, within EX31_RS13825 at 23.767 kb on + strand, within EX31_RS13825 at 23.767 kb on + strand, within EX31_RS13825 at 23.802 kb on + strand, within EX31_RS13825 at 23.802 kb on + strand, within EX31_RS13825 at 23.802 kb on + strand, within EX31_RS13825 at 23.802 kb on + strand, within EX31_RS13825 at 23.815 kb on + strand, within EX31_RS13825 at 23.815 kb on + strand, within EX31_RS13825 at 23.931 kb on + strand, within EX31_RS13825 at 23.939 kb on + strand, within EX31_RS13825 at 23.939 kb on + strand, within EX31_RS13825 at 23.962 kb on + strand, within EX31_RS13825 at 23.965 kb on + strand, within EX31_RS13825 at 23.965 kb on + strand, within EX31_RS13825 at 23.965 kb on + strand, within EX31_RS13825 at 23.965 kb on + strand, within EX31_RS13825 at 23.965 kb on + strand, within EX31_RS13825 at 23.966 kb on - strand, within EX31_RS13825 at 23.993 kb on + strand, within EX31_RS13825 at 23.993 kb on + strand, within EX31_RS13825 at 23.993 kb on + strand, within EX31_RS13825 at 23.993 kb on + strand, within EX31_RS13825 at 24.098 kb on + strand, within EX31_RS13825 at 24.098 kb on + strand, within EX31_RS13825 at 24.099 kb on - strand, within EX31_RS13825 at 24.173 kb on + strand at 24.174 kb on - strand at 24.188 kb on + strand at 24.188 kb on + strand at 24.188 kb on + strand at 24.188 kb on + strand at 24.188 kb on + strand at 24.188 kb on + strand at 24.188 kb on + strand at 24.189 kb on - strand at 24.189 kb on - strand at 24.234 kb on + strand at 24.245 kb on + strand at 24.284 kb on + strand at 24.285 kb on - strand at 24.285 kb on - strand at 24.392 kb on - strand at 24.437 kb on - strand, within EX31_RS26010 at 24.437 kb on - strand, within EX31_RS26010 at 24.450 kb on - strand, within EX31_RS26010 at 24.468 kb on - strand, within EX31_RS26010 at 24.533 kb on - strand at 24.533 kb on - strand at 24.533 kb on - strand at 24.533 kb on - strand at 24.563 kb on - strand at 24.595 kb on - strand at 24.629 kb on - strand at 24.629 kb on - strand at 24.629 kb on - strand at 24.630 kb on + strand at 24.631 kb on - strand at 24.684 kb on + strand at 24.685 kb on - strand at 24.735 kb on - strand at 24.770 kb on + strand at 24.775 kb on + strand at 24.775 kb on + strand at 24.776 kb on - strand at 24.776 kb on - strand at 24.781 kb on + strand at 24.781 kb on + strand at 24.781 kb on + strand at 24.781 kb on + strand at 24.818 kb on + strand at 24.819 kb on - strand at 24.832 kb on + strand at 24.948 kb on + strand, within EX31_RS13830 at 24.954 kb on - strand, within EX31_RS13830 at 24.969 kb on + strand, within EX31_RS13830 at 25.037 kb on + strand, within EX31_RS13830 at 25.089 kb on - strand, within EX31_RS13830 at 25.090 kb on + strand, within EX31_RS13830 at 25.118 kb on - strand, within EX31_RS13830 at 25.118 kb on - strand, within EX31_RS13830 at 25.139 kb on + strand, within EX31_RS13830 at 25.139 kb on + strand, within EX31_RS13830 at 25.139 kb on + strand, within EX31_RS13830 at 25.216 kb on + strand, within EX31_RS13830 at 25.216 kb on + strand, within EX31_RS13830 at 25.216 kb on + strand, within EX31_RS13830 at 25.216 kb on + strand, within EX31_RS13830 at 25.273 kb on + strand, within EX31_RS13830 at 25.294 kb on + strand, within EX31_RS13830 at 25.319 kb on + strand, within EX31_RS13830 at 25.319 kb on + strand, within EX31_RS13830 at 25.319 kb on + strand, within EX31_RS13830 at 25.319 kb on + strand, within EX31_RS13830 at 25.319 kb on + strand, within EX31_RS13830 at 25.319 kb on + strand, within EX31_RS13830 at 25.320 kb on - strand, within EX31_RS13830 at 25.320 kb on - strand, within EX31_RS13830 at 25.390 kb on + strand, within EX31_RS13830 at 25.390 kb on + strand, within EX31_RS13830 at 25.390 kb on + strand, within EX31_RS13830 at 25.390 kb on + strand, within EX31_RS13830 at 25.390 kb on + strand, within EX31_RS13830 at 25.390 kb on + strand, within EX31_RS13830 at 25.390 kb on + strand, within EX31_RS13830 at 25.390 kb on + strand, within EX31_RS13830 at 25.391 kb on - strand, within EX31_RS13830 at 25.444 kb on + strand, within EX31_RS13830 at 25.467 kb on + strand, within EX31_RS13830
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 23,431 + EX31_RS13825 0.11 +0.0 23,443 + EX31_RS13825 0.12 +1.7 23,443 + EX31_RS13825 0.12 +0.6 23,509 + EX31_RS13825 0.20 +0.0 23,509 + EX31_RS13825 0.20 -0.7 23,566 + EX31_RS13825 0.26 +0.6 23,734 + EX31_RS13825 0.45 +0.1 23,735 - EX31_RS13825 0.45 +1.1 23,747 + EX31_RS13825 0.46 -1.4 23,748 - EX31_RS13825 0.46 -1.4 23,767 + EX31_RS13825 0.48 +0.8 23,767 + EX31_RS13825 0.48 +0.2 23,802 + EX31_RS13825 0.52 +1.8 23,802 + EX31_RS13825 0.52 +0.2 23,802 + EX31_RS13825 0.52 -0.3 23,802 + EX31_RS13825 0.52 +1.2 23,815 + EX31_RS13825 0.54 -0.2 23,815 + EX31_RS13825 0.54 -0.5 23,931 + EX31_RS13825 0.66 -1.1 23,939 + EX31_RS13825 0.67 -1.8 23,939 + EX31_RS13825 0.67 -0.2 23,962 + EX31_RS13825 0.70 -1.1 23,965 + EX31_RS13825 0.70 +0.8 23,965 + EX31_RS13825 0.70 -0.5 23,965 + EX31_RS13825 0.70 +0.3 23,965 + EX31_RS13825 0.70 -0.3 23,965 + EX31_RS13825 0.70 +0.9 23,966 - EX31_RS13825 0.70 -0.7 23,993 + EX31_RS13825 0.73 -1.2 23,993 + EX31_RS13825 0.73 +0.2 23,993 + EX31_RS13825 0.73 +0.2 23,993 + EX31_RS13825 0.73 -0.1 24,098 + EX31_RS13825 0.85 +0.2 24,098 + EX31_RS13825 0.85 +0.7 24,099 - EX31_RS13825 0.85 -1.2 24,173 + +0.4 24,174 - -1.8 24,188 + +0.1 24,188 + -0.8 24,188 + -0.0 24,188 + +0.2 24,188 + -0.4 24,188 + +1.2 24,188 + -1.8 24,189 - -1.9 24,189 - +1.5 24,234 + -0.0 24,245 + -0.8 24,284 + -0.6 24,285 - -0.3 24,285 - -0.6 24,392 - -0.7 24,437 - EX31_RS26010 0.33 -1.6 24,437 - EX31_RS26010 0.33 -0.5 24,450 - EX31_RS26010 0.43 -2.9 24,468 - EX31_RS26010 0.58 -1.4 24,533 - +1.0 24,533 - +0.1 24,533 - -0.3 24,533 - -0.3 24,563 - -0.9 24,595 - -0.7 24,629 - +0.1 24,629 - -0.1 24,629 - -1.2 24,630 + +0.7 24,631 - +1.3 24,684 + -0.4 24,685 - -0.5 24,735 - +0.2 24,770 + -0.1 24,775 + +1.0 24,775 + -2.2 24,776 - +0.1 24,776 - -0.5 24,781 + -0.0 24,781 + +0.5 24,781 + +0.0 24,781 + +1.1 24,818 + +0.1 24,819 - -1.0 24,832 + -0.2 24,948 + EX31_RS13830 0.12 +0.0 24,954 - EX31_RS13830 0.13 -0.3 24,969 + EX31_RS13830 0.14 -1.7 25,037 + EX31_RS13830 0.21 +0.3 25,089 - EX31_RS13830 0.26 +0.4 25,090 + EX31_RS13830 0.26 +0.2 25,118 - EX31_RS13830 0.29 -0.8 25,118 - EX31_RS13830 0.29 +0.2 25,139 + EX31_RS13830 0.31 +0.3 25,139 + EX31_RS13830 0.31 +0.1 25,139 + EX31_RS13830 0.31 -0.2 25,216 + EX31_RS13830 0.38 -0.3 25,216 + EX31_RS13830 0.38 -0.2 25,216 + EX31_RS13830 0.38 -0.6 25,216 + EX31_RS13830 0.38 -0.2 25,273 + EX31_RS13830 0.44 -0.2 25,294 + EX31_RS13830 0.46 +0.7 25,319 + EX31_RS13830 0.49 +0.0 25,319 + EX31_RS13830 0.49 -2.0 25,319 + EX31_RS13830 0.49 +0.7 25,319 + EX31_RS13830 0.49 +0.4 25,319 + EX31_RS13830 0.49 -0.4 25,319 + EX31_RS13830 0.49 +0.2 25,320 - EX31_RS13830 0.49 -0.6 25,320 - EX31_RS13830 0.49 +0.4 25,390 + EX31_RS13830 0.55 +0.7 25,390 + EX31_RS13830 0.55 +0.5 25,390 + EX31_RS13830 0.55 +0.2 25,390 + EX31_RS13830 0.55 -0.9 25,390 + EX31_RS13830 0.55 -0.4 25,390 + EX31_RS13830 0.55 -0.1 25,390 + EX31_RS13830 0.55 +0.1 25,390 + EX31_RS13830 0.55 -0.3 25,391 - EX31_RS13830 0.56 -2.9 25,444 + EX31_RS13830 0.61 -2.3 25,467 + EX31_RS13830 0.63 +0.4
Or see this region's nucleotide sequence