Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS22745 and EX31_RS22750 are separated by 56 nucleotides EX31_RS22750 and EX31_RS22755 are separated by 219 nucleotides EX31_RS22755 and EX31_RS22760 are separated by 114 nucleotides EX31_RS22760 and EX31_RS22765 are separated by 1 nucleotides
EX31_RS22745: EX31_RS22745 - outer membrane protein assembly factor BamC, at 308,510 to 309,589
_RS22745
EX31_RS22750: EX31_RS22750 - phosphoribosylaminoimidazolesuccinocarboxamide synthase, at 309,646 to 310,359
_RS22750
EX31_RS22755: EX31_RS22755 - hypothetical protein, at 310,579 to 311,454
_RS22755
EX31_RS22760: EX31_RS22760 - DUF441 domain-containing protein, at 311,569 to 312,021
_RS22760
EX31_RS22765: EX31_RS22765 - tRNA(Met) cytidine acetyltransferase, at 312,023 to 314,008
_RS22765
Position (kb) 310
311
312 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 309.587 kb on + strand at 309.590 kb on + strand at 309.590 kb on + strand at 309.614 kb on + strand at 309.614 kb on + strand at 309.614 kb on + strand at 309.614 kb on + strand at 309.614 kb on + strand at 309.614 kb on + strand at 309.615 kb on - strand at 309.637 kb on + strand at 309.641 kb on + strand at 309.641 kb on + strand at 309.641 kb on + strand at 309.642 kb on - strand at 309.656 kb on + strand at 309.667 kb on + strand at 309.738 kb on + strand, within EX31_RS22750 at 309.738 kb on + strand, within EX31_RS22750 at 309.739 kb on - strand, within EX31_RS22750 at 309.793 kb on - strand, within EX31_RS22750 at 309.798 kb on + strand, within EX31_RS22750 at 309.798 kb on + strand, within EX31_RS22750 at 309.822 kb on + strand, within EX31_RS22750 at 309.822 kb on + strand, within EX31_RS22750 at 309.951 kb on - strand, within EX31_RS22750 at 310.111 kb on + strand, within EX31_RS22750 at 310.111 kb on + strand, within EX31_RS22750 at 310.111 kb on + strand, within EX31_RS22750 at 310.112 kb on - strand, within EX31_RS22750 at 310.112 kb on - strand, within EX31_RS22750 at 310.357 kb on + strand at 310.357 kb on + strand at 310.446 kb on + strand at 310.446 kb on + strand at 310.447 kb on - strand at 310.447 kb on - strand at 310.489 kb on + strand at 310.510 kb on + strand at 310.510 kb on + strand at 310.510 kb on + strand at 310.510 kb on + strand at 310.510 kb on + strand at 310.511 kb on - strand at 310.511 kb on - strand at 310.529 kb on + strand at 310.532 kb on + strand at 310.532 kb on + strand at 310.533 kb on - strand at 310.533 kb on - strand at 310.549 kb on + strand at 310.549 kb on + strand at 310.574 kb on + strand at 310.574 kb on + strand at 310.574 kb on + strand at 310.574 kb on + strand at 310.574 kb on + strand at 310.578 kb on + strand at 310.578 kb on + strand at 310.578 kb on + strand at 310.578 kb on + strand at 310.578 kb on + strand at 310.578 kb on + strand at 310.578 kb on + strand at 310.578 kb on + strand at 310.578 kb on + strand at 310.578 kb on + strand at 310.579 kb on - strand at 310.579 kb on - strand at 310.579 kb on - strand at 310.579 kb on - strand at 310.579 kb on - strand at 310.579 kb on - strand at 310.613 kb on + strand at 310.613 kb on + strand at 310.613 kb on + strand at 310.613 kb on + strand at 310.613 kb on + strand at 310.614 kb on - strand at 310.614 kb on - strand at 310.733 kb on - strand, within EX31_RS22755 at 310.906 kb on + strand, within EX31_RS22755 at 310.907 kb on - strand, within EX31_RS22755 at 310.907 kb on - strand, within EX31_RS22755 at 310.907 kb on - strand, within EX31_RS22755 at 310.907 kb on - strand, within EX31_RS22755 at 310.930 kb on + strand, within EX31_RS22755 at 310.931 kb on - strand, within EX31_RS22755 at 310.931 kb on - strand, within EX31_RS22755 at 310.931 kb on - strand, within EX31_RS22755 at 310.931 kb on - strand, within EX31_RS22755 at 310.987 kb on + strand, within EX31_RS22755 at 310.988 kb on - strand, within EX31_RS22755 at 311.011 kb on + strand, within EX31_RS22755 at 311.011 kb on + strand, within EX31_RS22755 at 311.011 kb on + strand, within EX31_RS22755 at 311.011 kb on + strand, within EX31_RS22755 at 311.011 kb on + strand, within EX31_RS22755 at 311.012 kb on - strand, within EX31_RS22755 at 311.012 kb on - strand, within EX31_RS22755 at 311.012 kb on - strand, within EX31_RS22755 at 311.013 kb on + strand, within EX31_RS22755 at 311.029 kb on + strand, within EX31_RS22755 at 311.177 kb on + strand, within EX31_RS22755 at 311.178 kb on - strand, within EX31_RS22755 at 311.204 kb on + strand, within EX31_RS22755 at 311.205 kb on - strand, within EX31_RS22755 at 311.388 kb on + strand at 311.388 kb on + strand at 311.433 kb on + strand at 311.433 kb on + strand at 311.433 kb on + strand at 311.434 kb on - strand at 311.434 kb on - strand at 311.437 kb on - strand at 311.456 kb on + strand at 311.457 kb on - strand at 311.601 kb on - strand at 311.625 kb on + strand, within EX31_RS22760 at 311.626 kb on - strand, within EX31_RS22760 at 311.680 kb on - strand, within EX31_RS22760 at 311.682 kb on + strand, within EX31_RS22760 at 311.682 kb on + strand, within EX31_RS22760 at 311.683 kb on - strand, within EX31_RS22760 at 311.739 kb on + strand, within EX31_RS22760 at 311.739 kb on + strand, within EX31_RS22760 at 311.740 kb on - strand, within EX31_RS22760 at 311.740 kb on - strand, within EX31_RS22760 at 311.742 kb on + strand, within EX31_RS22760 at 311.742 kb on + strand, within EX31_RS22760 at 311.829 kb on + strand, within EX31_RS22760 at 311.829 kb on + strand, within EX31_RS22760 at 311.830 kb on - strand, within EX31_RS22760 at 311.830 kb on - strand, within EX31_RS22760 at 311.830 kb on - strand, within EX31_RS22760 at 311.963 kb on + strand, within EX31_RS22760 at 312.039 kb on + strand at 312.039 kb on + strand at 312.040 kb on - strand at 312.269 kb on - strand, within EX31_RS22765 at 312.327 kb on + strand, within EX31_RS22765
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 309,587 + +0.2 309,590 + -1.1 309,590 + +0.6 309,614 + +0.3 309,614 + -0.6 309,614 + -1.3 309,614 + -0.4 309,614 + +0.9 309,614 + +0.6 309,615 - +2.3 309,637 + -1.5 309,641 + -1.7 309,641 + -0.8 309,641 + -0.1 309,642 - +0.2 309,656 + -0.3 309,667 + -0.8 309,738 + EX31_RS22750 0.13 -1.4 309,738 + EX31_RS22750 0.13 -2.6 309,739 - EX31_RS22750 0.13 -1.5 309,793 - EX31_RS22750 0.21 +1.7 309,798 + EX31_RS22750 0.21 -2.7 309,798 + EX31_RS22750 0.21 -1.3 309,822 + EX31_RS22750 0.25 -2.0 309,822 + EX31_RS22750 0.25 -2.1 309,951 - EX31_RS22750 0.43 +0.4 310,111 + EX31_RS22750 0.65 +1.1 310,111 + EX31_RS22750 0.65 -1.4 310,111 + EX31_RS22750 0.65 -2.0 310,112 - EX31_RS22750 0.65 -0.5 310,112 - EX31_RS22750 0.65 -1.7 310,357 + -0.3 310,357 + -1.6 310,446 + -0.9 310,446 + -1.8 310,447 - -0.5 310,447 - +0.6 310,489 + +1.4 310,510 + -1.5 310,510 + +0.2 310,510 + +1.3 310,510 + -2.0 310,510 + -2.1 310,511 - +0.0 310,511 - +0.1 310,529 + +0.3 310,532 + -1.3 310,532 + +0.7 310,533 - +0.8 310,533 - +0.2 310,549 + -0.9 310,549 + -1.4 310,574 + -0.1 310,574 + -2.4 310,574 + +0.4 310,574 + -1.0 310,574 + +0.3 310,578 + +0.9 310,578 + +1.6 310,578 + -1.9 310,578 + +0.1 310,578 + +0.9 310,578 + +0.2 310,578 + +1.3 310,578 + -0.5 310,578 + +0.7 310,578 + -0.3 310,579 - +1.0 310,579 - +0.8 310,579 - -0.0 310,579 - -0.5 310,579 - -0.4 310,579 - -0.2 310,613 + -0.4 310,613 + -0.2 310,613 + -0.4 310,613 + -0.5 310,613 + -0.3 310,614 - +0.8 310,614 - +0.4 310,733 - EX31_RS22755 0.18 -2.7 310,906 + EX31_RS22755 0.37 +0.9 310,907 - EX31_RS22755 0.37 -0.4 310,907 - EX31_RS22755 0.37 -2.0 310,907 - EX31_RS22755 0.37 -0.0 310,907 - EX31_RS22755 0.37 -0.5 310,930 + EX31_RS22755 0.40 -1.4 310,931 - EX31_RS22755 0.40 -0.1 310,931 - EX31_RS22755 0.40 -0.5 310,931 - EX31_RS22755 0.40 +0.3 310,931 - EX31_RS22755 0.40 -0.5 310,987 + EX31_RS22755 0.47 -2.3 310,988 - EX31_RS22755 0.47 +0.4 311,011 + EX31_RS22755 0.49 -0.3 311,011 + EX31_RS22755 0.49 -0.3 311,011 + EX31_RS22755 0.49 -1.2 311,011 + EX31_RS22755 0.49 -0.0 311,011 + EX31_RS22755 0.49 -3.0 311,012 - EX31_RS22755 0.49 -0.5 311,012 - EX31_RS22755 0.49 -2.3 311,012 - EX31_RS22755 0.49 -0.8 311,013 + EX31_RS22755 0.50 -0.9 311,029 + EX31_RS22755 0.51 -0.1 311,177 + EX31_RS22755 0.68 -0.9 311,178 - EX31_RS22755 0.68 -1.4 311,204 + EX31_RS22755 0.71 -1.8 311,205 - EX31_RS22755 0.71 -1.2 311,388 + -1.1 311,388 + -2.5 311,433 + +1.4 311,433 + -0.4 311,433 + +0.3 311,434 - -0.1 311,434 - -1.3 311,437 - -0.5 311,456 + -0.7 311,457 - -0.1 311,601 - +0.2 311,625 + EX31_RS22760 0.12 +0.5 311,626 - EX31_RS22760 0.13 +0.9 311,680 - EX31_RS22760 0.25 -2.2 311,682 + EX31_RS22760 0.25 +1.4 311,682 + EX31_RS22760 0.25 +0.8 311,683 - EX31_RS22760 0.25 -0.6 311,739 + EX31_RS22760 0.38 -0.3 311,739 + EX31_RS22760 0.38 -0.4 311,740 - EX31_RS22760 0.38 -0.6 311,740 - EX31_RS22760 0.38 +0.6 311,742 + EX31_RS22760 0.38 +0.0 311,742 + EX31_RS22760 0.38 -0.7 311,829 + EX31_RS22760 0.57 -0.5 311,829 + EX31_RS22760 0.57 -0.6 311,830 - EX31_RS22760 0.58 +0.1 311,830 - EX31_RS22760 0.58 +0.7 311,830 - EX31_RS22760 0.58 -0.8 311,963 + EX31_RS22760 0.87 -0.4 312,039 + +0.8 312,039 + +0.4 312,040 - +1.9 312,269 - EX31_RS22765 0.12 -0.5 312,327 + EX31_RS22765 0.15 +0.3
Or see this region's nucleotide sequence