Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS14440 and EX31_RS14445 overlap by 1 nucleotides EX31_RS14445 and EX31_RS14450 are separated by 6 nucleotides EX31_RS14450 and EX31_RS14455 are separated by 8 nucleotides
EX31_RS14440: EX31_RS14440 - 3-deoxy-D-manno-octulosonic acid transferase, at 70,766 to 72,040
_RS14440
EX31_RS14445: EX31_RS14445 - glycosyltransferase family 2 protein, at 72,040 to 72,807
_RS14445
EX31_RS14450: EX31_RS14450 - pantetheine-phosphate adenylyltransferase, at 72,814 to 73,296
_RS14450
EX31_RS14455: EX31_RS14455 - bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase, at 73,305 to 74,114
_RS14455
Position (kb) 72
73 Strain fitness (log2 ratio) -2
-1
0
1
2 at 72.006 kb on + strand at 72.006 kb on + strand at 72.006 kb on + strand at 72.017 kb on + strand at 72.017 kb on + strand at 72.017 kb on + strand at 72.017 kb on + strand at 72.038 kb on + strand at 72.095 kb on + strand at 72.095 kb on + strand at 72.111 kb on + strand at 72.112 kb on - strand at 72.112 kb on - strand at 72.119 kb on + strand, within EX31_RS14445 at 72.120 kb on - strand, within EX31_RS14445 at 72.137 kb on + strand, within EX31_RS14445 at 72.137 kb on + strand, within EX31_RS14445 at 72.203 kb on + strand, within EX31_RS14445 at 72.203 kb on + strand, within EX31_RS14445 at 72.204 kb on - strand, within EX31_RS14445 at 72.274 kb on + strand, within EX31_RS14445 at 72.275 kb on - strand, within EX31_RS14445 at 72.275 kb on - strand, within EX31_RS14445 at 72.317 kb on + strand, within EX31_RS14445 at 72.317 kb on + strand, within EX31_RS14445 at 72.369 kb on + strand, within EX31_RS14445 at 72.385 kb on - strand, within EX31_RS14445 at 72.424 kb on + strand, within EX31_RS14445 at 72.456 kb on + strand, within EX31_RS14445 at 72.456 kb on + strand, within EX31_RS14445 at 72.456 kb on + strand, within EX31_RS14445 at 72.456 kb on + strand, within EX31_RS14445 at 72.456 kb on + strand, within EX31_RS14445 at 72.456 kb on + strand, within EX31_RS14445 at 72.456 kb on + strand, within EX31_RS14445 at 72.457 kb on - strand, within EX31_RS14445 at 72.457 kb on - strand, within EX31_RS14445 at 72.457 kb on - strand, within EX31_RS14445 at 72.457 kb on - strand, within EX31_RS14445 at 72.466 kb on + strand, within EX31_RS14445 at 72.466 kb on + strand, within EX31_RS14445 at 72.466 kb on + strand, within EX31_RS14445 at 72.467 kb on - strand, within EX31_RS14445 at 72.589 kb on + strand, within EX31_RS14445 at 72.590 kb on - strand, within EX31_RS14445 at 72.661 kb on - strand, within EX31_RS14445 at 72.661 kb on - strand, within EX31_RS14445 at 72.706 kb on - strand, within EX31_RS14445 at 72.706 kb on - strand, within EX31_RS14445 at 72.706 kb on - strand, within EX31_RS14445 at 72.751 kb on + strand at 72.751 kb on + strand at 72.753 kb on + strand at 72.753 kb on + strand at 72.753 kb on + strand at 72.753 kb on + strand at 72.753 kb on + strand at 72.753 kb on + strand at 72.753 kb on + strand at 72.753 kb on + strand at 72.753 kb on + strand at 72.762 kb on + strand at 72.766 kb on + strand at 72.766 kb on + strand at 73.370 kb on + strand at 73.405 kb on + strand, within EX31_RS14455 at 73.406 kb on - strand, within EX31_RS14455 at 73.406 kb on - strand, within EX31_RS14455 at 73.407 kb on + strand, within EX31_RS14455 at 73.407 kb on + strand, within EX31_RS14455 at 73.407 kb on + strand, within EX31_RS14455 at 73.407 kb on + strand, within EX31_RS14455 at 73.408 kb on - strand, within EX31_RS14455 at 73.408 kb on - strand, within EX31_RS14455 at 73.429 kb on + strand, within EX31_RS14455 at 73.452 kb on + strand, within EX31_RS14455 at 73.452 kb on + strand, within EX31_RS14455 at 73.453 kb on - strand, within EX31_RS14455 at 73.453 kb on - strand, within EX31_RS14455 at 73.453 kb on - strand, within EX31_RS14455 at 73.453 kb on - strand, within EX31_RS14455 at 73.453 kb on - strand, within EX31_RS14455 at 73.574 kb on + strand, within EX31_RS14455 at 73.575 kb on - strand, within EX31_RS14455 at 73.603 kb on + strand, within EX31_RS14455 at 73.603 kb on + strand, within EX31_RS14455 at 73.603 kb on + strand, within EX31_RS14455 at 73.603 kb on + strand, within EX31_RS14455 at 73.603 kb on + strand, within EX31_RS14455 at 73.603 kb on + strand, within EX31_RS14455 at 73.603 kb on + strand, within EX31_RS14455 at 73.603 kb on + strand, within EX31_RS14455 at 73.604 kb on - strand, within EX31_RS14455 at 73.604 kb on - strand, within EX31_RS14455 at 73.604 kb on - strand, within EX31_RS14455 at 73.604 kb on - strand, within EX31_RS14455 at 73.604 kb on - strand, within EX31_RS14455 at 73.604 kb on - strand, within EX31_RS14455 at 73.604 kb on - strand, within EX31_RS14455 at 73.604 kb on - strand, within EX31_RS14455 at 73.604 kb on - strand, within EX31_RS14455 at 73.607 kb on + strand, within EX31_RS14455 at 73.607 kb on + strand, within EX31_RS14455 at 73.607 kb on + strand, within EX31_RS14455 at 73.607 kb on + strand, within EX31_RS14455 at 73.608 kb on - strand, within EX31_RS14455 at 73.608 kb on - strand, within EX31_RS14455 at 73.608 kb on - strand, within EX31_RS14455 at 73.608 kb on - strand, within EX31_RS14455 at 73.691 kb on - strand, within EX31_RS14455 at 73.691 kb on - strand, within EX31_RS14455 at 73.738 kb on - strand, within EX31_RS14455 at 73.738 kb on - strand, within EX31_RS14455 at 73.738 kb on - strand, within EX31_RS14455 at 73.799 kb on + strand, within EX31_RS14455 at 73.801 kb on + strand, within EX31_RS14455 at 73.802 kb on - strand, within EX31_RS14455 at 73.802 kb on - strand, within EX31_RS14455 at 73.802 kb on - strand, within EX31_RS14455
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 72,006 + +0.8 72,006 + -0.4 72,006 + +0.1 72,017 + +0.6 72,017 + +0.5 72,017 + +0.2 72,017 + -1.5 72,038 + +0.9 72,095 + -0.3 72,095 + -0.9 72,111 + +0.4 72,112 - -0.3 72,112 - +1.0 72,119 + EX31_RS14445 0.10 +0.4 72,120 - EX31_RS14445 0.10 +0.7 72,137 + EX31_RS14445 0.13 -0.9 72,137 + EX31_RS14445 0.13 -1.1 72,203 + EX31_RS14445 0.21 -1.2 72,203 + EX31_RS14445 0.21 +0.1 72,204 - EX31_RS14445 0.21 -1.8 72,274 + EX31_RS14445 0.30 -0.3 72,275 - EX31_RS14445 0.31 +0.1 72,275 - EX31_RS14445 0.31 +0.5 72,317 + EX31_RS14445 0.36 -0.3 72,317 + EX31_RS14445 0.36 -0.1 72,369 + EX31_RS14445 0.43 -1.1 72,385 - EX31_RS14445 0.45 +2.6 72,424 + EX31_RS14445 0.50 -0.4 72,456 + EX31_RS14445 0.54 -0.2 72,456 + EX31_RS14445 0.54 +1.3 72,456 + EX31_RS14445 0.54 +1.9 72,456 + EX31_RS14445 0.54 -0.4 72,456 + EX31_RS14445 0.54 -0.6 72,456 + EX31_RS14445 0.54 -1.5 72,456 + EX31_RS14445 0.54 -0.9 72,457 - EX31_RS14445 0.54 -2.0 72,457 - EX31_RS14445 0.54 -1.4 72,457 - EX31_RS14445 0.54 -2.0 72,457 - EX31_RS14445 0.54 -0.9 72,466 + EX31_RS14445 0.55 -2.3 72,466 + EX31_RS14445 0.55 +0.3 72,466 + EX31_RS14445 0.55 -1.8 72,467 - EX31_RS14445 0.56 -2.2 72,589 + EX31_RS14445 0.71 +0.8 72,590 - EX31_RS14445 0.72 -2.7 72,661 - EX31_RS14445 0.81 -2.4 72,661 - EX31_RS14445 0.81 -0.4 72,706 - EX31_RS14445 0.87 +0.5 72,706 - EX31_RS14445 0.87 -1.3 72,706 - EX31_RS14445 0.87 +1.1 72,751 + -0.3 72,751 + +0.7 72,753 + -0.0 72,753 + +1.2 72,753 + +1.3 72,753 + -1.2 72,753 + +0.4 72,753 + +0.5 72,753 + -0.6 72,753 + -1.9 72,753 + -0.4 72,762 + -0.5 72,766 + +0.2 72,766 + +1.2 73,370 + +0.6 73,405 + EX31_RS14455 0.12 +1.6 73,406 - EX31_RS14455 0.12 +0.0 73,406 - EX31_RS14455 0.12 +0.5 73,407 + EX31_RS14455 0.13 +0.8 73,407 + EX31_RS14455 0.13 +0.7 73,407 + EX31_RS14455 0.13 +0.3 73,407 + EX31_RS14455 0.13 -0.4 73,408 - EX31_RS14455 0.13 -0.0 73,408 - EX31_RS14455 0.13 -1.0 73,429 + EX31_RS14455 0.15 -1.2 73,452 + EX31_RS14455 0.18 -0.0 73,452 + EX31_RS14455 0.18 -0.8 73,453 - EX31_RS14455 0.18 -1.4 73,453 - EX31_RS14455 0.18 -0.2 73,453 - EX31_RS14455 0.18 +0.5 73,453 - EX31_RS14455 0.18 +0.5 73,453 - EX31_RS14455 0.18 +0.0 73,574 + EX31_RS14455 0.33 +0.1 73,575 - EX31_RS14455 0.33 -0.4 73,603 + EX31_RS14455 0.37 +0.4 73,603 + EX31_RS14455 0.37 +0.5 73,603 + EX31_RS14455 0.37 -0.4 73,603 + EX31_RS14455 0.37 +0.2 73,603 + EX31_RS14455 0.37 +0.0 73,603 + EX31_RS14455 0.37 -1.1 73,603 + EX31_RS14455 0.37 -0.6 73,603 + EX31_RS14455 0.37 +0.9 73,604 - EX31_RS14455 0.37 -0.8 73,604 - EX31_RS14455 0.37 +0.3 73,604 - EX31_RS14455 0.37 +0.0 73,604 - EX31_RS14455 0.37 +1.3 73,604 - EX31_RS14455 0.37 -0.4 73,604 - EX31_RS14455 0.37 -0.9 73,604 - EX31_RS14455 0.37 -0.2 73,604 - EX31_RS14455 0.37 +0.1 73,604 - EX31_RS14455 0.37 -0.5 73,607 + EX31_RS14455 0.37 -0.8 73,607 + EX31_RS14455 0.37 +0.8 73,607 + EX31_RS14455 0.37 -0.0 73,607 + EX31_RS14455 0.37 -0.6 73,608 - EX31_RS14455 0.37 -0.9 73,608 - EX31_RS14455 0.37 -0.2 73,608 - EX31_RS14455 0.37 -0.6 73,608 - EX31_RS14455 0.37 +0.3 73,691 - EX31_RS14455 0.48 -0.2 73,691 - EX31_RS14455 0.48 -0.7 73,738 - EX31_RS14455 0.53 -0.3 73,738 - EX31_RS14455 0.53 -0.8 73,738 - EX31_RS14455 0.53 +0.6 73,799 + EX31_RS14455 0.61 +0.2 73,801 + EX31_RS14455 0.61 +0.2 73,802 - EX31_RS14455 0.61 -0.8 73,802 - EX31_RS14455 0.61 +0.3 73,802 - EX31_RS14455 0.61 +0.5
Or see this region's nucleotide sequence