Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS10060 and EX31_RS10065 are separated by 187 nucleotides EX31_RS10065 and EX31_RS25990 are separated by 376 nucleotides
EX31_RS10060: EX31_RS10060 - oligopeptide ABC transporter permease OppB, at 218,082 to 219,002
_RS10060
EX31_RS10065: EX31_RS10065 - oligopeptide ABC transporter substrate-binding protein OppA, at 219,190 to 220,830
_RS10065
EX31_RS25990: EX31_RS25990 - hypothetical protein, at 221,207 to 221,410
_RS25990
Position (kb) 219
220
221 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 218.299 kb on + strand, within EX31_RS10060 at 218.299 kb on + strand, within EX31_RS10060 at 218.299 kb on + strand, within EX31_RS10060 at 218.300 kb on - strand, within EX31_RS10060 at 218.300 kb on - strand, within EX31_RS10060 at 218.300 kb on - strand, within EX31_RS10060 at 218.300 kb on - strand, within EX31_RS10060 at 218.300 kb on - strand, within EX31_RS10060 at 218.300 kb on - strand, within EX31_RS10060 at 218.300 kb on - strand, within EX31_RS10060 at 218.300 kb on - strand, within EX31_RS10060 at 218.300 kb on - strand, within EX31_RS10060 at 218.327 kb on + strand, within EX31_RS10060 at 218.430 kb on - strand, within EX31_RS10060 at 218.438 kb on + strand, within EX31_RS10060 at 218.448 kb on - strand, within EX31_RS10060 at 218.450 kb on - strand, within EX31_RS10060 at 218.450 kb on - strand, within EX31_RS10060 at 218.450 kb on - strand, within EX31_RS10060 at 218.483 kb on + strand, within EX31_RS10060 at 218.484 kb on - strand, within EX31_RS10060 at 218.484 kb on - strand, within EX31_RS10060 at 218.529 kb on - strand, within EX31_RS10060 at 218.529 kb on - strand, within EX31_RS10060 at 218.545 kb on - strand, within EX31_RS10060 at 218.618 kb on - strand, within EX31_RS10060 at 218.687 kb on + strand, within EX31_RS10060 at 218.687 kb on + strand, within EX31_RS10060 at 218.688 kb on - strand, within EX31_RS10060 at 218.688 kb on - strand, within EX31_RS10060 at 218.752 kb on + strand, within EX31_RS10060 at 218.752 kb on + strand, within EX31_RS10060 at 218.753 kb on - strand, within EX31_RS10060 at 218.753 kb on - strand, within EX31_RS10060 at 218.759 kb on + strand, within EX31_RS10060 at 218.759 kb on + strand, within EX31_RS10060 at 218.760 kb on - strand, within EX31_RS10060 at 218.760 kb on - strand, within EX31_RS10060 at 218.760 kb on - strand, within EX31_RS10060 at 218.760 kb on - strand, within EX31_RS10060 at 218.761 kb on + strand, within EX31_RS10060 at 218.761 kb on + strand, within EX31_RS10060 at 218.762 kb on - strand, within EX31_RS10060 at 218.762 kb on - strand, within EX31_RS10060 at 218.762 kb on - strand, within EX31_RS10060 at 218.762 kb on - strand, within EX31_RS10060 at 218.762 kb on - strand, within EX31_RS10060 at 218.762 kb on - strand, within EX31_RS10060 at 218.803 kb on - strand, within EX31_RS10060 at 218.824 kb on + strand, within EX31_RS10060 at 218.824 kb on + strand, within EX31_RS10060 at 218.825 kb on - strand, within EX31_RS10060 at 218.825 kb on - strand, within EX31_RS10060 at 218.825 kb on - strand, within EX31_RS10060 at 218.825 kb on - strand, within EX31_RS10060 at 218.825 kb on - strand, within EX31_RS10060 at 218.825 kb on - strand, within EX31_RS10060 at 218.825 kb on - strand, within EX31_RS10060 at 218.846 kb on - strand, within EX31_RS10060 at 218.986 kb on - strand at 218.997 kb on + strand at 219.020 kb on - strand at 219.031 kb on + strand at 219.032 kb on - strand at 219.042 kb on - strand at 219.128 kb on + strand at 219.128 kb on + strand at 219.140 kb on + strand at 219.188 kb on - strand at 219.188 kb on - strand at 219.188 kb on - strand at 219.206 kb on + strand at 219.206 kb on + strand at 219.206 kb on + strand at 219.206 kb on + strand at 219.206 kb on + strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.207 kb on - strand at 219.208 kb on + strand at 219.208 kb on + strand at 219.209 kb on - strand at 219.209 kb on - strand at 219.209 kb on - strand at 219.209 kb on - strand at 219.209 kb on - strand at 219.209 kb on - strand at 219.209 kb on - strand at 219.209 kb on - strand at 219.209 kb on - strand at 219.209 kb on - strand at 219.209 kb on - strand at 219.222 kb on - strand at 219.222 kb on - strand at 219.263 kb on + strand at 219.264 kb on - strand at 219.264 kb on - strand at 219.264 kb on - strand at 219.264 kb on - strand at 219.264 kb on - strand at 219.264 kb on - strand at 219.264 kb on - strand at 219.264 kb on - strand at 219.264 kb on - strand at 219.290 kb on + strand at 219.290 kb on + strand at 219.290 kb on + strand at 219.291 kb on - strand at 219.293 kb on + strand at 219.294 kb on - strand at 219.294 kb on - strand at 219.296 kb on + strand at 219.297 kb on - strand at 219.297 kb on - strand at 219.348 kb on - strand at 219.421 kb on - strand, within EX31_RS10065 at 219.421 kb on - strand, within EX31_RS10065 at 219.421 kb on - strand, within EX31_RS10065 at 219.422 kb on + strand, within EX31_RS10065 at 219.423 kb on - strand, within EX31_RS10065 at 219.650 kb on + strand, within EX31_RS10065 at 219.651 kb on - strand, within EX31_RS10065 at 219.676 kb on - strand, within EX31_RS10065 at 219.676 kb on - strand, within EX31_RS10065 at 219.685 kb on - strand, within EX31_RS10065 at 219.686 kb on + strand, within EX31_RS10065 at 219.793 kb on - strand, within EX31_RS10065 at 219.801 kb on - strand, within EX31_RS10065 at 219.801 kb on - strand, within EX31_RS10065 at 219.801 kb on - strand, within EX31_RS10065 at 219.801 kb on - strand, within EX31_RS10065 at 219.826 kb on + strand, within EX31_RS10065 at 219.827 kb on - strand, within EX31_RS10065 at 219.924 kb on - strand, within EX31_RS10065 at 219.926 kb on + strand, within EX31_RS10065 at 219.926 kb on + strand, within EX31_RS10065 at 219.927 kb on - strand, within EX31_RS10065 at 219.927 kb on - strand, within EX31_RS10065 at 220.008 kb on + strand, within EX31_RS10065 at 220.009 kb on - strand, within EX31_RS10065 at 220.009 kb on - strand, within EX31_RS10065 at 220.010 kb on + strand, within EX31_RS10065 at 220.011 kb on - strand, within EX31_RS10065 at 220.011 kb on - strand, within EX31_RS10065 at 220.011 kb on - strand, within EX31_RS10065 at 220.191 kb on - strand, within EX31_RS10065 at 220.283 kb on + strand, within EX31_RS10065 at 220.348 kb on - strand, within EX31_RS10065 at 220.459 kb on - strand, within EX31_RS10065 at 220.481 kb on - strand, within EX31_RS10065 at 220.537 kb on - strand, within EX31_RS10065 at 220.565 kb on - strand, within EX31_RS10065 at 220.600 kb on - strand, within EX31_RS10065 at 220.600 kb on - strand, within EX31_RS10065 at 220.600 kb on - strand, within EX31_RS10065 at 220.636 kb on - strand, within EX31_RS10065 at 220.778 kb on - strand at 220.852 kb on - strand at 220.852 kb on - strand at 220.945 kb on + strand at 220.945 kb on + strand at 220.945 kb on + strand at 220.945 kb on + strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.946 kb on - strand at 220.949 kb on + strand at 220.977 kb on - strand at 220.977 kb on - strand at 220.977 kb on - strand at 220.985 kb on + strand at 220.985 kb on + strand at 220.985 kb on + strand at 220.985 kb on + strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.986 kb on - strand at 220.989 kb on - strand at 221.113 kb on - strand at 221.120 kb on + strand at 221.120 kb on + strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.121 kb on - strand at 221.127 kb on - strand at 221.145 kb on - strand at 221.147 kb on + strand at 221.148 kb on - strand at 221.156 kb on - strand at 221.191 kb on - strand at 221.191 kb on - strand at 221.209 kb on - strand at 221.269 kb on + strand, within EX31_RS25990 at 221.270 kb on - strand, within EX31_RS25990 at 221.270 kb on - strand, within EX31_RS25990 at 221.270 kb on - strand, within EX31_RS25990 at 221.349 kb on + strand, within EX31_RS25990 at 221.367 kb on - strand, within EX31_RS25990 at 221.392 kb on + strand at 221.393 kb on - strand at 221.670 kb on - strand at 221.697 kb on + strand at 221.710 kb on - strand at 221.719 kb on - strand at 221.719 kb on - strand at 221.747 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 218,299 + EX31_RS10060 0.24 -1.0 218,299 + EX31_RS10060 0.24 +1.4 218,299 + EX31_RS10060 0.24 +0.5 218,300 - EX31_RS10060 0.24 +1.7 218,300 - EX31_RS10060 0.24 +0.1 218,300 - EX31_RS10060 0.24 +0.3 218,300 - EX31_RS10060 0.24 +0.6 218,300 - EX31_RS10060 0.24 -1.5 218,300 - EX31_RS10060 0.24 -0.2 218,300 - EX31_RS10060 0.24 -1.0 218,300 - EX31_RS10060 0.24 +0.5 218,300 - EX31_RS10060 0.24 -0.8 218,327 + EX31_RS10060 0.27 +0.5 218,430 - EX31_RS10060 0.38 -1.9 218,438 + EX31_RS10060 0.39 -0.2 218,448 - EX31_RS10060 0.40 -0.6 218,450 - EX31_RS10060 0.40 -0.3 218,450 - EX31_RS10060 0.40 +0.5 218,450 - EX31_RS10060 0.40 -2.1 218,483 + EX31_RS10060 0.44 -1.0 218,484 - EX31_RS10060 0.44 +0.2 218,484 - EX31_RS10060 0.44 +1.7 218,529 - EX31_RS10060 0.49 -0.6 218,529 - EX31_RS10060 0.49 -0.2 218,545 - EX31_RS10060 0.50 -0.9 218,618 - EX31_RS10060 0.58 +0.8 218,687 + EX31_RS10060 0.66 +0.5 218,687 + EX31_RS10060 0.66 +0.3 218,688 - EX31_RS10060 0.66 -0.4 218,688 - EX31_RS10060 0.66 -0.5 218,752 + EX31_RS10060 0.73 +0.6 218,752 + EX31_RS10060 0.73 +1.0 218,753 - EX31_RS10060 0.73 +0.1 218,753 - EX31_RS10060 0.73 +0.7 218,759 + EX31_RS10060 0.74 +2.0 218,759 + EX31_RS10060 0.74 -0.6 218,760 - EX31_RS10060 0.74 +0.6 218,760 - EX31_RS10060 0.74 +0.8 218,760 - EX31_RS10060 0.74 -2.4 218,760 - EX31_RS10060 0.74 -1.9 218,761 + EX31_RS10060 0.74 -1.4 218,761 + EX31_RS10060 0.74 -2.4 218,762 - EX31_RS10060 0.74 -0.0 218,762 - EX31_RS10060 0.74 +1.0 218,762 - EX31_RS10060 0.74 +1.8 218,762 - EX31_RS10060 0.74 -1.8 218,762 - EX31_RS10060 0.74 +1.1 218,762 - EX31_RS10060 0.74 +0.6 218,803 - EX31_RS10060 0.78 -0.0 218,824 + EX31_RS10060 0.81 +0.1 218,824 + EX31_RS10060 0.81 -0.2 218,825 - EX31_RS10060 0.81 -0.1 218,825 - EX31_RS10060 0.81 -0.1 218,825 - EX31_RS10060 0.81 +1.8 218,825 - EX31_RS10060 0.81 +0.3 218,825 - EX31_RS10060 0.81 -0.6 218,825 - EX31_RS10060 0.81 +0.5 218,825 - EX31_RS10060 0.81 -1.3 218,846 - EX31_RS10060 0.83 -1.4 218,986 - +0.0 218,997 + -1.8 219,020 - +0.3 219,031 + -2.4 219,032 - -0.5 219,042 - +0.8 219,128 + +0.6 219,128 + +1.0 219,140 + +0.1 219,188 - -0.3 219,188 - +0.8 219,188 - +0.4 219,206 + -0.6 219,206 + -2.0 219,206 + -0.3 219,206 + -0.0 219,206 + +0.0 219,207 - -0.2 219,207 - +1.3 219,207 - -0.7 219,207 - +0.3 219,207 - +0.0 219,207 - +1.6 219,207 - +1.0 219,207 - +0.4 219,207 - +1.0 219,207 - -0.2 219,207 - +0.8 219,207 - +1.2 219,207 - -1.9 219,207 - -1.3 219,207 - -1.1 219,207 - +0.0 219,207 - +0.6 219,208 + -0.5 219,208 + -0.2 219,209 - +1.2 219,209 - +0.4 219,209 - -1.1 219,209 - -0.6 219,209 - +0.5 219,209 - +0.2 219,209 - +0.4 219,209 - +1.6 219,209 - +0.1 219,209 - +1.0 219,209 - +0.7 219,222 - -0.9 219,222 - +0.7 219,263 + -0.7 219,264 - +1.2 219,264 - +0.4 219,264 - +0.5 219,264 - -2.2 219,264 - -0.3 219,264 - -1.6 219,264 - +1.6 219,264 - +0.1 219,264 - -1.4 219,290 + -0.1 219,290 + -0.4 219,290 + -1.0 219,291 - -0.6 219,293 + -0.0 219,294 - -0.2 219,294 - -0.4 219,296 + +0.1 219,297 - -2.8 219,297 - -2.7 219,348 - +0.3 219,421 - EX31_RS10065 0.14 -0.3 219,421 - EX31_RS10065 0.14 +0.4 219,421 - EX31_RS10065 0.14 -0.9 219,422 + EX31_RS10065 0.14 -2.2 219,423 - EX31_RS10065 0.14 -1.0 219,650 + EX31_RS10065 0.28 -0.9 219,651 - EX31_RS10065 0.28 -1.6 219,676 - EX31_RS10065 0.30 +0.1 219,676 - EX31_RS10065 0.30 +0.5 219,685 - EX31_RS10065 0.30 -0.9 219,686 + EX31_RS10065 0.30 +0.7 219,793 - EX31_RS10065 0.37 +1.4 219,801 - EX31_RS10065 0.37 +1.7 219,801 - EX31_RS10065 0.37 -0.5 219,801 - EX31_RS10065 0.37 +0.4 219,801 - EX31_RS10065 0.37 +0.2 219,826 + EX31_RS10065 0.39 +0.9 219,827 - EX31_RS10065 0.39 +1.1 219,924 - EX31_RS10065 0.45 +1.0 219,926 + EX31_RS10065 0.45 -0.1 219,926 + EX31_RS10065 0.45 -1.8 219,927 - EX31_RS10065 0.45 +0.6 219,927 - EX31_RS10065 0.45 -0.4 220,008 + EX31_RS10065 0.50 +1.3 220,009 - EX31_RS10065 0.50 -0.2 220,009 - EX31_RS10065 0.50 -2.2 220,010 + EX31_RS10065 0.50 -0.9 220,011 - EX31_RS10065 0.50 -3.0 220,011 - EX31_RS10065 0.50 +0.4 220,011 - EX31_RS10065 0.50 -0.1 220,191 - EX31_RS10065 0.61 -1.1 220,283 + EX31_RS10065 0.67 -0.4 220,348 - EX31_RS10065 0.71 +0.6 220,459 - EX31_RS10065 0.77 +0.1 220,481 - EX31_RS10065 0.79 +0.3 220,537 - EX31_RS10065 0.82 -1.7 220,565 - EX31_RS10065 0.84 +0.5 220,600 - EX31_RS10065 0.86 +0.7 220,600 - EX31_RS10065 0.86 +0.7 220,600 - EX31_RS10065 0.86 +0.8 220,636 - EX31_RS10065 0.88 -0.0 220,778 - +0.4 220,852 - -0.2 220,852 - -0.6 220,945 + -0.2 220,945 + -1.7 220,945 + -1.4 220,945 + +1.2 220,946 - +0.3 220,946 - +0.9 220,946 - -1.0 220,946 - -0.1 220,946 - -0.0 220,946 - +1.4 220,946 - +0.4 220,946 - -0.4 220,946 - -1.7 220,946 - +0.2 220,946 - +0.5 220,946 - -0.1 220,949 + -1.3 220,977 - +0.6 220,977 - +0.2 220,977 - -0.4 220,985 + -0.5 220,985 + +0.4 220,985 + -0.5 220,985 + -0.8 220,986 - -0.4 220,986 - +0.4 220,986 - -0.4 220,986 - +0.1 220,986 - -1.3 220,986 - -0.2 220,986 - -0.9 220,986 - +0.8 220,986 - +1.0 220,986 - +0.6 220,986 - -1.5 220,986 - +0.7 220,986 - +0.1 220,989 - -2.1 221,113 - +0.9 221,120 + +0.1 221,120 + +1.2 221,121 - +0.6 221,121 - +0.7 221,121 - -0.3 221,121 - +0.5 221,121 - -1.2 221,121 - +0.1 221,121 - -0.3 221,121 - +0.2 221,121 - -1.7 221,121 - +1.9 221,121 - -0.1 221,121 - +0.6 221,121 - +1.0 221,121 - +1.0 221,121 - -0.1 221,121 - +1.3 221,121 - -0.2 221,127 - +1.1 221,145 - +0.3 221,147 + -0.9 221,148 - -0.1 221,156 - +0.0 221,191 - +0.8 221,191 - +1.4 221,209 - +0.3 221,269 + EX31_RS25990 0.30 +0.7 221,270 - EX31_RS25990 0.31 +0.4 221,270 - EX31_RS25990 0.31 +0.1 221,270 - EX31_RS25990 0.31 +1.1 221,349 + EX31_RS25990 0.70 -1.6 221,367 - EX31_RS25990 0.78 +0.0 221,392 + -3.5 221,393 - -0.1 221,670 - +0.8 221,697 + -0.7 221,710 - +0.1 221,719 - +0.2 221,719 - +0.4 221,747 + -0.8
Or see this region's nucleotide sequence