Strain Fitness in Rahnella sp. WP5 around EX31_RS02705

Experiment: MGL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MGL
10,944	+				-0.2
10,944	+				-0.7
10,944	+				+0.8
10,944	+				-0.9
10,944	+				+0.3
10,945	-				+2.5
10,947	+				-0.8
10,947	+				-0.2
10,947	+				-0.2
10,948	-				-0.8
10,960	+				-0.9
10,961	-				-1.8
10,965	+				+0.4
11,023	+				-1.3
11,032	+				+2.4
11,033	-				-1.6
11,067	+				-0.8
11,067	+				-0.1
11,067	+				-2.6
11,068	-				-0.7
11,075	+				-0.2
11,194	+		EX31_RS02695	0.29	-0.2
11,278	+		EX31_RS02695	0.44	-1.2
11,279	-		EX31_RS02695	0.44	+0.6
11,331	+		EX31_RS02695	0.54	-0.6
11,426	+		EX31_RS02695	0.71	+0.4
11,473	+		EX31_RS02695	0.79	+0.7
11,531	+		EX31_RS02695	0.90	-0.8
11,531	+		EX31_RS02695	0.90	+1.0
11,531	+		EX31_RS02695	0.90	-2.6
11,531	+		EX31_RS02695	0.90	+0.1
11,531	+		EX31_RS02695	0.90	+0.9
11,532	-				-0.3
11,533	+				+0.4
11,533	+				-1.1
11,533	+				+0.2
11,543	+				+1.8
11,543	+				+0.2
11,543	+				-0.3
11,632	-		EX31_RS02700	0.20	-1.4
11,760	+		EX31_RS02700	0.61	-0.3
11,811	+		EX31_RS02700	0.78	-0.7
11,826	+		EX31_RS02700	0.83	-0.2
11,827	-		EX31_RS02700	0.83	-0.1
11,827	-		EX31_RS02700	0.83	-2.1
11,827	-		EX31_RS02700	0.83	+0.1
11,861	+				-1.0
11,875	+				+1.5
11,882	+				+0.9
11,882	+				+0.9
11,882	+				-1.5
11,882	+				-0.2
11,882	+				-0.5
11,883	-				+0.5
11,883	-				-1.3
11,883	-				+0.8
11,913	-				-0.4
11,915	+				+0.7
11,915	+				-0.1
11,915	+				-0.4
11,915	+				+0.7
11,915	+				-0.2
11,915	+				-0.0
11,915	+				-2.1
11,915	+				-0.3
11,915	+				-0.1
11,915	+				-0.2
11,915	+				+1.1
11,916	-				+0.2
11,916	-				+2.1
11,916	-				-0.4
11,934	+				-0.8
12,149	-		EX31_RS02705	0.41	-0.5
12,161	-		EX31_RS02705	0.43	-1.0
12,268	+		EX31_RS02705	0.61	-1.1
12,268	+		EX31_RS02705	0.61	-2.7
12,268	+		EX31_RS02705	0.61	+1.2
12,268	+		EX31_RS02705	0.61	-1.9
12,268	+		EX31_RS02705	0.61	-0.2
12,268	+		EX31_RS02705	0.61	+0.8
12,268	+		EX31_RS02705	0.61	-0.1
12,268	+		EX31_RS02705	0.61	-1.3
12,268	+		EX31_RS02705	0.61	-0.7
12,268	+		EX31_RS02705	0.61	-0.4
12,268	+		EX31_RS02705	0.61	-1.2
12,268	+		EX31_RS02705	0.61	+0.9
12,268	+		EX31_RS02705	0.61	-0.3
12,268	+		EX31_RS02705	0.61	-0.1
12,269	-		EX31_RS02705	0.61	-0.7
12,269	-		EX31_RS02705	0.61	+1.3
12,269	-		EX31_RS02705	0.61	+0.6
12,269	-		EX31_RS02705	0.61	-2.5
12,270	+		EX31_RS02705	0.61	-1.4
12,270	+		EX31_RS02705	0.61	+0.7
12,330	+		EX31_RS02705	0.71	-0.1
12,331	-		EX31_RS02705	0.71	-1.5
12,331	-		EX31_RS02705	0.71	+0.6
12,331	-		EX31_RS02705	0.71	+0.3
12,364	+		EX31_RS02705	0.76	-2.2
12,379	+		EX31_RS02705	0.79	-0.3
12,380	-		EX31_RS02705	0.79	-0.9
12,464	+				-0.7
12,464	+				+1.1
12,464	+				-0.8
12,464	+				-0.9
12,464	+				-0.6
12,465	-				-2.4
12,505	+				+0.5
12,505	+				+0.0
12,505	+				-0.1
12,505	+				+0.8
12,506	-				-0.9
12,506	-				-0.2
12,527	+				+0.2
12,527	+				+1.3
12,527	+				+0.0
12,528	-				+0.5
12,528	-				-2.8
12,535	+				+1.1
12,535	+				-0.1
12,536	-				-2.2
12,550	-				-1.0
12,614	+		EX31_RS02710	0.10	+0.2
12,614	+		EX31_RS02710	0.10	-1.0
12,775	+		EX31_RS02710	0.24	+0.2
12,799	+		EX31_RS02710	0.26	-0.9
12,859	+		EX31_RS02710	0.32	+1.8
12,859	+		EX31_RS02710	0.32	-0.0
12,859	+		EX31_RS02710	0.32	+0.6
12,859	+		EX31_RS02710	0.32	-0.7
12,859	+		EX31_RS02710	0.32	-0.2
12,859	+		EX31_RS02710	0.32	+0.2
12,860	-		EX31_RS02710	0.32	+0.2
12,860	-		EX31_RS02710	0.32	-0.4
12,860	-		EX31_RS02710	0.32	+0.2
12,913	+		EX31_RS02710	0.36	-0.3
12,914	-		EX31_RS02710	0.36	-2.5
13,048	+		EX31_RS02710	0.48	-0.4
13,048	+		EX31_RS02710	0.48	-1.1
13,049	-		EX31_RS02710	0.48	+0.1
13,090	+		EX31_RS02710	0.52	+0.6
13,091	-		EX31_RS02710	0.52	-0.1
13,109	+		EX31_RS02710	0.54	+0.2
13,109	+		EX31_RS02710	0.54	+0.3
13,109	+		EX31_RS02710	0.54	-0.5
13,109	+		EX31_RS02710	0.54	-2.4
13,109	+		EX31_RS02710	0.54	+0.0
13,110	-		EX31_RS02710	0.54	+0.5
13,110	-		EX31_RS02710	0.54	-1.1
13,110	-		EX31_RS02710	0.54	+1.4
13,205	+		EX31_RS02710	0.62	+1.5
13,205	+		EX31_RS02710	0.62	-1.1
13,205	+		EX31_RS02710	0.62	-1.8
13,235	+		EX31_RS02710	0.65	+0.3
13,259	+		EX31_RS02710	0.67	+0.3
13,260	-		EX31_RS02710	0.67	-0.1
13,277	+		EX31_RS02710	0.68	-0.0
13,278	-		EX31_RS02710	0.68	-0.4
13,367	+		EX31_RS02710	0.76	-0.6
13,367	+		EX31_RS02710	0.76	-0.6
13,369	+		EX31_RS02710	0.76	+0.9
13,369	+		EX31_RS02710	0.76	+0.1
13,369	+		EX31_RS02710	0.76	+1.5
13,370	-		EX31_RS02710	0.77	+1.1
13,370	-		EX31_RS02710	0.77	+0.1
13,370	-		EX31_RS02710	0.77	-1.8
13,370	-		EX31_RS02710	0.77	+0.5
13,382	+		EX31_RS02710	0.78	-1.4
13,382	+		EX31_RS02710	0.78	-2.5
13,382	+		EX31_RS02710	0.78	-0.4
13,382	+		EX31_RS02710	0.78	-1.2
13,382	+		EX31_RS02710	0.78	-3.5
13,382	+		EX31_RS02710	0.78	-0.2
13,382	+		EX31_RS02710	0.78	-1.2
13,383	-		EX31_RS02710	0.78	-0.3
13,383	-		EX31_RS02710	0.78	-0.9
13,383	-		EX31_RS02710	0.78	-0.8
13,383	-		EX31_RS02710	0.78	-0.1
13,383	-		EX31_RS02710	0.78	-0.4
13,383	-		EX31_RS02710	0.78	+0.3
13,383	-		EX31_RS02710	0.78	-1.5
13,384	+		EX31_RS02710	0.78	-1.1
13,384	+		EX31_RS02710	0.78	+0.7
13,384	+		EX31_RS02710	0.78	-0.1
13,384	+		EX31_RS02710	0.78	-1.0
13,385	-		EX31_RS02710	0.78	+0.9
13,487	+		EX31_RS02710	0.87	+0.1
13,487	+		EX31_RS02710	0.87	-0.1
13,487	+		EX31_RS02710	0.87	-1.2
13,487	+		EX31_RS02710	0.87	-3.3
13,487	+		EX31_RS02710	0.87	-0.1
13,488	-		EX31_RS02710	0.87	+0.2
13,488	-		EX31_RS02710	0.87	-1.2