Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS00265 and EX31_RS00270 are separated by 787 nucleotides EX31_RS00270 and EX31_RS00275 are separated by 178 nucleotides
EX31_RS00265: EX31_RS00265 - alpha/beta hydrolase, at 55,062 to 55,820
_RS00265
EX31_RS00270: EX31_RS00270 - TonB-dependent receptor, at 56,608 to 58,761
_RS00270
EX31_RS00275: EX31_RS00275 - glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase, at 58,940 to 61,339
_RS00275
Position (kb) 56
57
58
59 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 55.641 kb on + strand, within EX31_RS00265 at 55.642 kb on - strand, within EX31_RS00265 at 55.655 kb on + strand, within EX31_RS00265 at 55.655 kb on + strand, within EX31_RS00265 at 55.658 kb on - strand, within EX31_RS00265 at 55.681 kb on + strand, within EX31_RS00265 at 55.682 kb on - strand, within EX31_RS00265 at 55.682 kb on - strand, within EX31_RS00265 at 55.684 kb on - strand, within EX31_RS00265 at 55.733 kb on + strand, within EX31_RS00265 at 55.733 kb on + strand, within EX31_RS00265 at 55.806 kb on + strand at 55.807 kb on - strand at 55.812 kb on + strand at 55.812 kb on + strand at 55.813 kb on - strand at 55.813 kb on - strand at 55.813 kb on - strand at 55.836 kb on - strand at 55.836 kb on - strand at 55.986 kb on + strand at 56.012 kb on - strand at 56.022 kb on + strand at 56.023 kb on - strand at 56.042 kb on + strand at 56.053 kb on + strand at 56.053 kb on + strand at 56.053 kb on + strand at 56.054 kb on - strand at 56.054 kb on - strand at 56.054 kb on - strand at 56.054 kb on - strand at 56.054 kb on - strand at 56.104 kb on + strand at 56.105 kb on - strand at 56.105 kb on - strand at 56.107 kb on - strand at 56.107 kb on - strand at 56.107 kb on - strand at 56.111 kb on - strand at 56.111 kb on - strand at 56.173 kb on + strand at 56.187 kb on + strand at 56.226 kb on - strand at 56.338 kb on + strand at 56.340 kb on + strand at 56.408 kb on + strand at 56.409 kb on - strand at 56.457 kb on - strand at 56.460 kb on + strand at 56.461 kb on - strand at 56.463 kb on + strand at 56.463 kb on + strand at 56.481 kb on + strand at 56.536 kb on + strand at 56.536 kb on + strand at 56.536 kb on + strand at 56.587 kb on + strand at 56.587 kb on + strand at 56.631 kb on + strand at 56.902 kb on + strand, within EX31_RS00270 at 56.902 kb on + strand, within EX31_RS00270 at 56.902 kb on + strand, within EX31_RS00270 at 56.902 kb on + strand, within EX31_RS00270 at 56.903 kb on - strand, within EX31_RS00270 at 56.953 kb on + strand, within EX31_RS00270 at 56.953 kb on + strand, within EX31_RS00270 at 56.953 kb on + strand, within EX31_RS00270 at 56.953 kb on + strand, within EX31_RS00270 at 56.953 kb on + strand, within EX31_RS00270 at 56.953 kb on + strand, within EX31_RS00270 at 56.953 kb on + strand, within EX31_RS00270 at 56.954 kb on - strand, within EX31_RS00270 at 56.954 kb on - strand, within EX31_RS00270 at 56.954 kb on - strand, within EX31_RS00270 at 56.973 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.977 kb on + strand, within EX31_RS00270 at 56.978 kb on - strand, within EX31_RS00270 at 56.978 kb on - strand, within EX31_RS00270 at 56.978 kb on - strand, within EX31_RS00270 at 56.988 kb on + strand, within EX31_RS00270 at 56.988 kb on + strand, within EX31_RS00270 at 57.031 kb on - strand, within EX31_RS00270 at 57.088 kb on + strand, within EX31_RS00270 at 57.089 kb on - strand, within EX31_RS00270 at 57.166 kb on + strand, within EX31_RS00270 at 57.167 kb on - strand, within EX31_RS00270 at 57.167 kb on - strand, within EX31_RS00270 at 57.178 kb on + strand, within EX31_RS00270 at 57.192 kb on + strand, within EX31_RS00270 at 57.250 kb on + strand, within EX31_RS00270 at 57.342 kb on + strand, within EX31_RS00270 at 57.342 kb on + strand, within EX31_RS00270 at 57.466 kb on + strand, within EX31_RS00270 at 57.466 kb on + strand, within EX31_RS00270 at 57.466 kb on + strand, within EX31_RS00270 at 57.466 kb on + strand, within EX31_RS00270 at 57.467 kb on - strand, within EX31_RS00270 at 57.467 kb on - strand, within EX31_RS00270 at 57.477 kb on + strand, within EX31_RS00270 at 57.477 kb on + strand, within EX31_RS00270 at 57.477 kb on + strand, within EX31_RS00270 at 57.477 kb on + strand, within EX31_RS00270 at 57.478 kb on - strand, within EX31_RS00270 at 57.584 kb on - strand, within EX31_RS00270 at 57.651 kb on + strand, within EX31_RS00270 at 57.651 kb on + strand, within EX31_RS00270 at 57.651 kb on + strand, within EX31_RS00270 at 57.651 kb on + strand, within EX31_RS00270 at 57.652 kb on - strand, within EX31_RS00270 at 57.655 kb on + strand, within EX31_RS00270 at 57.655 kb on + strand, within EX31_RS00270 at 57.656 kb on - strand, within EX31_RS00270 at 57.940 kb on + strand, within EX31_RS00270 at 57.940 kb on + strand, within EX31_RS00270 at 57.940 kb on + strand, within EX31_RS00270 at 57.940 kb on + strand, within EX31_RS00270 at 57.940 kb on + strand, within EX31_RS00270 at 57.940 kb on + strand, within EX31_RS00270 at 57.940 kb on + strand, within EX31_RS00270 at 57.941 kb on - strand, within EX31_RS00270 at 57.941 kb on - strand, within EX31_RS00270 at 57.941 kb on - strand, within EX31_RS00270 at 57.941 kb on - strand, within EX31_RS00270 at 58.015 kb on + strand, within EX31_RS00270 at 58.042 kb on + strand, within EX31_RS00270 at 58.042 kb on + strand, within EX31_RS00270 at 58.042 kb on + strand, within EX31_RS00270 at 58.042 kb on + strand, within EX31_RS00270 at 58.042 kb on + strand, within EX31_RS00270 at 58.042 kb on + strand, within EX31_RS00270 at 58.042 kb on + strand, within EX31_RS00270 at 58.042 kb on + strand, within EX31_RS00270 at 58.042 kb on + strand, within EX31_RS00270 at 58.043 kb on - strand, within EX31_RS00270 at 58.043 kb on - strand, within EX31_RS00270 at 58.044 kb on + strand, within EX31_RS00270 at 58.044 kb on + strand, within EX31_RS00270 at 58.044 kb on + strand, within EX31_RS00270 at 58.044 kb on + strand, within EX31_RS00270 at 58.044 kb on + strand, within EX31_RS00270 at 58.044 kb on + strand, within EX31_RS00270 at 58.045 kb on - strand, within EX31_RS00270 at 58.146 kb on + strand, within EX31_RS00270 at 58.190 kb on + strand, within EX31_RS00270 at 58.191 kb on - strand, within EX31_RS00270 at 58.267 kb on + strand, within EX31_RS00270 at 58.313 kb on + strand, within EX31_RS00270 at 58.313 kb on + strand, within EX31_RS00270 at 58.313 kb on + strand, within EX31_RS00270 at 58.371 kb on + strand, within EX31_RS00270 at 58.371 kb on + strand, within EX31_RS00270 at 58.371 kb on + strand, within EX31_RS00270 at 58.371 kb on + strand, within EX31_RS00270 at 58.372 kb on - strand, within EX31_RS00270 at 58.435 kb on - strand, within EX31_RS00270 at 58.454 kb on - strand, within EX31_RS00270 at 58.510 kb on + strand, within EX31_RS00270 at 58.510 kb on + strand, within EX31_RS00270 at 58.561 kb on + strand at 58.561 kb on + strand at 58.562 kb on - strand at 58.563 kb on + strand at 58.563 kb on + strand at 58.563 kb on + strand at 58.564 kb on - strand at 58.627 kb on - strand at 58.657 kb on + strand at 58.658 kb on - strand at 58.677 kb on + strand at 58.677 kb on + strand at 58.677 kb on + strand at 58.677 kb on + strand at 58.678 kb on - strand at 58.696 kb on + strand at 58.696 kb on + strand at 58.723 kb on + strand at 58.723 kb on + strand at 58.723 kb on + strand at 58.724 kb on - strand at 58.747 kb on + strand at 58.747 kb on + strand at 58.749 kb on + strand at 58.749 kb on + strand at 58.749 kb on + strand at 58.749 kb on + strand at 58.749 kb on + strand at 58.766 kb on + strand at 58.766 kb on + strand at 58.895 kb on + strand at 58.915 kb on + strand at 58.939 kb on + strand at 58.977 kb on + strand at 58.977 kb on + strand at 58.977 kb on + strand at 58.978 kb on - strand at 59.012 kb on + strand at 59.012 kb on + strand at 59.012 kb on + strand at 59.012 kb on + strand at 59.012 kb on + strand at 59.013 kb on - strand at 59.046 kb on + strand at 59.046 kb on + strand at 59.063 kb on + strand at 59.064 kb on - strand at 59.069 kb on - strand at 59.131 kb on - strand at 59.217 kb on + strand, within EX31_RS00275 at 59.264 kb on + strand, within EX31_RS00275 at 59.264 kb on + strand, within EX31_RS00275 at 59.264 kb on + strand, within EX31_RS00275 at 59.264 kb on + strand, within EX31_RS00275 at 59.264 kb on + strand, within EX31_RS00275 at 59.264 kb on + strand, within EX31_RS00275 at 59.264 kb on + strand, within EX31_RS00275 at 59.265 kb on - strand, within EX31_RS00275 at 59.266 kb on + strand, within EX31_RS00275 at 59.386 kb on + strand, within EX31_RS00275 at 59.386 kb on + strand, within EX31_RS00275 at 59.451 kb on - strand, within EX31_RS00275 at 59.451 kb on - strand, within EX31_RS00275 at 59.503 kb on + strand, within EX31_RS00275 at 59.621 kb on + strand, within EX31_RS00275 at 59.622 kb on - strand, within EX31_RS00275 at 59.629 kb on + strand, within EX31_RS00275 at 59.708 kb on - strand, within EX31_RS00275
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 55,641 + EX31_RS00265 0.76 +1.2 55,642 - EX31_RS00265 0.76 -0.1 55,655 + EX31_RS00265 0.78 -0.5 55,655 + EX31_RS00265 0.78 +0.3 55,658 - EX31_RS00265 0.79 +0.4 55,681 + EX31_RS00265 0.82 -0.9 55,682 - EX31_RS00265 0.82 -0.6 55,682 - EX31_RS00265 0.82 +0.9 55,684 - EX31_RS00265 0.82 +0.7 55,733 + EX31_RS00265 0.88 -2.5 55,733 + EX31_RS00265 0.88 +0.3 55,806 + -1.1 55,807 - +0.3 55,812 + -1.1 55,812 + -1.0 55,813 - +0.5 55,813 - +1.6 55,813 - +0.8 55,836 - -0.5 55,836 - -0.9 55,986 + -0.3 56,012 - -0.0 56,022 + +0.7 56,023 - -1.1 56,042 + -0.7 56,053 + -0.1 56,053 + +1.0 56,053 + -2.1 56,054 - -0.9 56,054 - +0.4 56,054 - +0.7 56,054 - +0.7 56,054 - -0.1 56,104 + -0.0 56,105 - +0.1 56,105 - -0.4 56,107 - +0.0 56,107 - +1.7 56,107 - -0.4 56,111 - -0.7 56,111 - +0.2 56,173 + +1.0 56,187 + -0.2 56,226 - +0.3 56,338 + -1.4 56,340 + +0.6 56,408 + +1.2 56,409 - -0.5 56,457 - -1.5 56,460 + +0.8 56,461 - -0.7 56,463 + +0.1 56,463 + -1.5 56,481 + +0.5 56,536 + -0.1 56,536 + -1.4 56,536 + +0.6 56,587 + -0.9 56,587 + -1.0 56,631 + +0.2 56,902 + EX31_RS00270 0.14 +0.2 56,902 + EX31_RS00270 0.14 +0.5 56,902 + EX31_RS00270 0.14 +1.6 56,902 + EX31_RS00270 0.14 -0.5 56,903 - EX31_RS00270 0.14 +1.3 56,953 + EX31_RS00270 0.16 +0.1 56,953 + EX31_RS00270 0.16 +1.3 56,953 + EX31_RS00270 0.16 -0.4 56,953 + EX31_RS00270 0.16 +0.2 56,953 + EX31_RS00270 0.16 +0.5 56,953 + EX31_RS00270 0.16 +1.3 56,953 + EX31_RS00270 0.16 +0.5 56,954 - EX31_RS00270 0.16 -2.0 56,954 - EX31_RS00270 0.16 -0.4 56,954 - EX31_RS00270 0.16 -2.5 56,973 + EX31_RS00270 0.17 +0.9 56,977 + EX31_RS00270 0.17 -1.8 56,977 + EX31_RS00270 0.17 +0.1 56,977 + EX31_RS00270 0.17 +0.6 56,977 + EX31_RS00270 0.17 +0.3 56,977 + EX31_RS00270 0.17 -1.1 56,977 + EX31_RS00270 0.17 +0.3 56,977 + EX31_RS00270 0.17 -0.5 56,977 + EX31_RS00270 0.17 +1.6 56,977 + EX31_RS00270 0.17 +0.0 56,977 + EX31_RS00270 0.17 -0.5 56,977 + EX31_RS00270 0.17 +0.9 56,978 - EX31_RS00270 0.17 -2.9 56,978 - EX31_RS00270 0.17 -0.4 56,978 - EX31_RS00270 0.17 -2.2 56,988 + EX31_RS00270 0.18 -0.0 56,988 + EX31_RS00270 0.18 +0.2 57,031 - EX31_RS00270 0.20 -0.1 57,088 + EX31_RS00270 0.22 -0.1 57,089 - EX31_RS00270 0.22 -1.1 57,166 + EX31_RS00270 0.26 -2.8 57,167 - EX31_RS00270 0.26 +0.4 57,167 - EX31_RS00270 0.26 +1.8 57,178 + EX31_RS00270 0.26 -0.2 57,192 + EX31_RS00270 0.27 -0.9 57,250 + EX31_RS00270 0.30 +0.5 57,342 + EX31_RS00270 0.34 -0.2 57,342 + EX31_RS00270 0.34 +0.5 57,466 + EX31_RS00270 0.40 +0.1 57,466 + EX31_RS00270 0.40 +0.3 57,466 + EX31_RS00270 0.40 +1.0 57,466 + EX31_RS00270 0.40 -1.0 57,467 - EX31_RS00270 0.40 +0.5 57,467 - EX31_RS00270 0.40 +0.3 57,477 + EX31_RS00270 0.40 +0.4 57,477 + EX31_RS00270 0.40 -0.3 57,477 + EX31_RS00270 0.40 +1.8 57,477 + EX31_RS00270 0.40 +0.1 57,478 - EX31_RS00270 0.40 +1.0 57,584 - EX31_RS00270 0.45 -0.5 57,651 + EX31_RS00270 0.48 -0.9 57,651 + EX31_RS00270 0.48 -0.4 57,651 + EX31_RS00270 0.48 -0.3 57,651 + EX31_RS00270 0.48 -0.3 57,652 - EX31_RS00270 0.48 -0.3 57,655 + EX31_RS00270 0.49 -0.3 57,655 + EX31_RS00270 0.49 -0.2 57,656 - EX31_RS00270 0.49 +0.2 57,940 + EX31_RS00270 0.62 +0.6 57,940 + EX31_RS00270 0.62 -1.3 57,940 + EX31_RS00270 0.62 -0.5 57,940 + EX31_RS00270 0.62 +0.2 57,940 + EX31_RS00270 0.62 -0.8 57,940 + EX31_RS00270 0.62 -1.9 57,940 + EX31_RS00270 0.62 -0.3 57,941 - EX31_RS00270 0.62 -1.2 57,941 - EX31_RS00270 0.62 -0.4 57,941 - EX31_RS00270 0.62 -1.3 57,941 - EX31_RS00270 0.62 -1.7 58,015 + EX31_RS00270 0.65 -0.7 58,042 + EX31_RS00270 0.67 +0.7 58,042 + EX31_RS00270 0.67 +0.5 58,042 + EX31_RS00270 0.67 +0.5 58,042 + EX31_RS00270 0.67 +0.7 58,042 + EX31_RS00270 0.67 -0.3 58,042 + EX31_RS00270 0.67 -1.1 58,042 + EX31_RS00270 0.67 -0.5 58,042 + EX31_RS00270 0.67 -1.1 58,042 + EX31_RS00270 0.67 +0.0 58,043 - EX31_RS00270 0.67 -1.0 58,043 - EX31_RS00270 0.67 +1.4 58,044 + EX31_RS00270 0.67 -0.1 58,044 + EX31_RS00270 0.67 +0.3 58,044 + EX31_RS00270 0.67 -0.4 58,044 + EX31_RS00270 0.67 -0.0 58,044 + EX31_RS00270 0.67 -0.1 58,044 + EX31_RS00270 0.67 +0.1 58,045 - EX31_RS00270 0.67 +0.5 58,146 + EX31_RS00270 0.71 -3.6 58,190 + EX31_RS00270 0.73 +0.6 58,191 - EX31_RS00270 0.73 -0.1 58,267 + EX31_RS00270 0.77 +0.5 58,313 + EX31_RS00270 0.79 +0.0 58,313 + EX31_RS00270 0.79 -1.2 58,313 + EX31_RS00270 0.79 +0.1 58,371 + EX31_RS00270 0.82 +0.4 58,371 + EX31_RS00270 0.82 +0.5 58,371 + EX31_RS00270 0.82 +0.3 58,371 + EX31_RS00270 0.82 +0.7 58,372 - EX31_RS00270 0.82 +0.4 58,435 - EX31_RS00270 0.85 +0.5 58,454 - EX31_RS00270 0.86 -0.4 58,510 + EX31_RS00270 0.88 -0.8 58,510 + EX31_RS00270 0.88 +0.1 58,561 + +0.7 58,561 + +0.7 58,562 - -0.2 58,563 + -1.0 58,563 + -1.0 58,563 + +0.3 58,564 - -0.7 58,627 - -0.5 58,657 + -0.0 58,658 - -0.3 58,677 + -1.0 58,677 + +0.4 58,677 + -0.3 58,677 + -0.3 58,678 - -0.0 58,696 + +0.2 58,696 + -0.4 58,723 + -0.2 58,723 + +0.3 58,723 + -1.7 58,724 - -0.1 58,747 + -1.2 58,747 + +0.5 58,749 + -0.8 58,749 + +0.7 58,749 + +0.2 58,749 + -0.1 58,749 + +0.4 58,766 + -0.9 58,766 + +0.6 58,895 + -0.1 58,915 + -1.8 58,939 + +0.3 58,977 + +0.1 58,977 + -2.6 58,977 + -1.9 58,978 - +0.9 59,012 + -0.4 59,012 + -1.2 59,012 + +0.2 59,012 + +0.4 59,012 + -0.6 59,013 - +0.8 59,046 + -1.4 59,046 + +0.3 59,063 + +1.2 59,064 - +0.5 59,069 - +1.1 59,131 - -2.2 59,217 + EX31_RS00275 0.12 -0.8 59,264 + EX31_RS00275 0.14 -0.4 59,264 + EX31_RS00275 0.14 -0.9 59,264 + EX31_RS00275 0.14 +1.2 59,264 + EX31_RS00275 0.14 +0.4 59,264 + EX31_RS00275 0.14 +0.8 59,264 + EX31_RS00275 0.14 +0.1 59,264 + EX31_RS00275 0.14 +0.0 59,265 - EX31_RS00275 0.14 -1.1 59,266 + EX31_RS00275 0.14 +0.6 59,386 + EX31_RS00275 0.19 +0.6 59,386 + EX31_RS00275 0.19 -1.0 59,451 - EX31_RS00275 0.21 -0.2 59,451 - EX31_RS00275 0.21 +1.3 59,503 + EX31_RS00275 0.23 +0.6 59,621 + EX31_RS00275 0.28 -0.3 59,622 - EX31_RS00275 0.28 -0.5 59,629 + EX31_RS00275 0.29 +0.4 59,708 - EX31_RS00275 0.32 +0.4
Or see this region's nucleotide sequence