Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS17025 and EX31_RS17030 are separated by 307 nucleotides
EX31_RS17025: EX31_RS17025 - FadR family transcriptional regulator, at 16,090 to 16,803
_RS17025
EX31_RS17030: EX31_RS17030 - FAD-dependent oxidoreductase, at 17,111 to 18,319
_RS17030
Position (kb)
17
18
19 Strain fitness (log2 ratio)
-1
0
1 at 16.132 kb on + strand at 16.133 kb on - strand at 16.154 kb on - strand at 16.198 kb on + strand, within EX31_RS17025 at 16.277 kb on + strand, within EX31_RS17025 at 16.277 kb on + strand, within EX31_RS17025 at 16.325 kb on + strand, within EX31_RS17025 at 16.405 kb on - strand, within EX31_RS17025 at 16.522 kb on - strand, within EX31_RS17025 at 16.522 kb on - strand, within EX31_RS17025 at 16.724 kb on + strand, within EX31_RS17025 at 16.724 kb on + strand, within EX31_RS17025 at 16.725 kb on - strand, within EX31_RS17025 at 16.725 kb on - strand, within EX31_RS17025 at 16.783 kb on + strand at 16.783 kb on + strand at 16.784 kb on - strand at 16.789 kb on + strand at 16.790 kb on - strand at 16.790 kb on - strand at 17.033 kb on + strand at 17.033 kb on + strand at 17.033 kb on + strand at 17.033 kb on + strand at 17.033 kb on + strand at 17.179 kb on - strand at 17.189 kb on + strand at 17.281 kb on + strand, within EX31_RS17030 at 17.282 kb on - strand, within EX31_RS17030 at 17.425 kb on + strand, within EX31_RS17030 at 17.537 kb on - strand, within EX31_RS17030 at 17.537 kb on - strand, within EX31_RS17030 at 17.537 kb on - strand, within EX31_RS17030 at 17.688 kb on + strand, within EX31_RS17030 at 17.928 kb on + strand, within EX31_RS17030 at 17.928 kb on + strand, within EX31_RS17030 at 17.929 kb on - strand, within EX31_RS17030 at 18.074 kb on - strand, within EX31_RS17030 at 18.120 kb on + strand, within EX31_RS17030 at 18.178 kb on + strand, within EX31_RS17030 at 18.179 kb on - strand, within EX31_RS17030 at 18.188 kb on - strand, within EX31_RS17030 at 18.257 kb on - strand at 18.259 kb on - strand at 18.354 kb on + strand at 18.355 kb on - strand at 18.360 kb on + strand at 18.403 kb on + strand at 18.409 kb on + strand at 18.409 kb on + strand at 18.446 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 16,132 + +0.8 16,133 - -0.4 16,154 - -0.8 16,198 + EX31_RS17025 0.15 +0.7 16,277 + EX31_RS17025 0.26 +0.2 16,277 + EX31_RS17025 0.26 -0.6 16,325 + EX31_RS17025 0.33 -0.9 16,405 - EX31_RS17025 0.44 -1.2 16,522 - EX31_RS17025 0.61 -0.2 16,522 - EX31_RS17025 0.61 -0.1 16,724 + EX31_RS17025 0.89 +0.8 16,724 + EX31_RS17025 0.89 -0.3 16,725 - EX31_RS17025 0.89 +0.0 16,725 - EX31_RS17025 0.89 +0.4 16,783 + +0.1 16,783 + +0.2 16,784 - +0.1 16,789 + -0.0 16,790 - +1.5 16,790 - +0.0 17,033 + -0.0 17,033 + -0.2 17,033 + -1.0 17,033 + -0.4 17,033 + +0.0 17,179 - +0.5 17,189 + -0.2 17,281 + EX31_RS17030 0.14 +0.8 17,282 - EX31_RS17030 0.14 +0.8 17,425 + EX31_RS17030 0.26 +1.5 17,537 - EX31_RS17030 0.35 -0.9 17,537 - EX31_RS17030 0.35 -0.1 17,537 - EX31_RS17030 0.35 -1.1 17,688 + EX31_RS17030 0.48 +0.3 17,928 + EX31_RS17030 0.68 -0.0 17,928 + EX31_RS17030 0.68 -0.1 17,929 - EX31_RS17030 0.68 +0.4 18,074 - EX31_RS17030 0.80 -0.4 18,120 + EX31_RS17030 0.83 +1.1 18,178 + EX31_RS17030 0.88 +0.5 18,179 - EX31_RS17030 0.88 +1.0 18,188 - EX31_RS17030 0.89 +0.1 18,257 - +0.4 18,259 - -0.5 18,354 + -0.6 18,355 - +0.5 18,360 + -1.6 18,403 + +0.3 18,409 + +0.5 18,409 + -0.8 18,446 - +0.7
Or see this region's nucleotide sequence