Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS11905 and EX31_RS11910 are separated by 225 nucleotides EX31_RS11910 and EX31_RS11915 are separated by 103 nucleotides EX31_RS11915 and EX31_RS11920 are separated by 36 nucleotides
EX31_RS11905: EX31_RS11905 - 3-oxoacyl-ACP reductase FabG, at 41,037 to 41,786
_RS11905
EX31_RS11910: EX31_RS11910 - aspartate/tyrosine/aromatic aminotransferase, at 42,012 to 43,205
_RS11910
EX31_RS11915: EX31_RS11915 - DeoR/GlpR transcriptional regulator, at 43,309 to 44,094
_RS11915
EX31_RS11920: EX31_RS11920 - sugar kinase, at 44,131 to 45,027
_RS11920
Position (kb) 42
43
44 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 41.017 kb on + strand at 41.081 kb on + strand at 41.081 kb on + strand at 41.081 kb on + strand at 41.082 kb on - strand at 41.082 kb on - strand at 41.083 kb on + strand at 41.083 kb on + strand at 41.083 kb on + strand at 41.084 kb on - strand at 41.107 kb on + strand at 41.108 kb on - strand at 41.159 kb on + strand, within EX31_RS11905 at 41.159 kb on + strand, within EX31_RS11905 at 41.160 kb on - strand, within EX31_RS11905 at 41.160 kb on - strand, within EX31_RS11905 at 41.160 kb on - strand, within EX31_RS11905 at 41.204 kb on + strand, within EX31_RS11905 at 41.205 kb on - strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.229 kb on + strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.230 kb on - strand, within EX31_RS11905 at 41.315 kb on - strand, within EX31_RS11905 at 41.315 kb on - strand, within EX31_RS11905 at 41.339 kb on + strand, within EX31_RS11905 at 41.339 kb on + strand, within EX31_RS11905 at 41.339 kb on + strand, within EX31_RS11905 at 41.339 kb on + strand, within EX31_RS11905 at 41.339 kb on + strand, within EX31_RS11905 at 41.340 kb on - strand, within EX31_RS11905 at 41.340 kb on - strand, within EX31_RS11905 at 41.430 kb on + strand, within EX31_RS11905 at 41.430 kb on + strand, within EX31_RS11905 at 41.430 kb on + strand, within EX31_RS11905 at 41.430 kb on + strand, within EX31_RS11905 at 41.431 kb on - strand, within EX31_RS11905 at 41.431 kb on - strand, within EX31_RS11905 at 41.431 kb on - strand, within EX31_RS11905 at 41.431 kb on - strand, within EX31_RS11905 at 41.431 kb on - strand, within EX31_RS11905 at 41.435 kb on + strand, within EX31_RS11905 at 41.436 kb on - strand, within EX31_RS11905 at 41.436 kb on - strand, within EX31_RS11905 at 41.447 kb on + strand, within EX31_RS11905 at 41.448 kb on - strand, within EX31_RS11905 at 41.448 kb on - strand, within EX31_RS11905 at 41.448 kb on - strand, within EX31_RS11905 at 41.595 kb on + strand, within EX31_RS11905 at 41.595 kb on + strand, within EX31_RS11905 at 41.596 kb on - strand, within EX31_RS11905 at 41.669 kb on - strand, within EX31_RS11905 at 41.669 kb on - strand, within EX31_RS11905 at 41.669 kb on - strand, within EX31_RS11905 at 41.669 kb on - strand, within EX31_RS11905 at 41.759 kb on + strand at 41.759 kb on + strand at 41.825 kb on + strand at 41.825 kb on + strand at 41.825 kb on + strand at 41.826 kb on - strand at 41.826 kb on - strand at 41.826 kb on - strand at 41.826 kb on - strand at 41.826 kb on - strand at 41.871 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.901 kb on + strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.902 kb on - strand at 41.930 kb on + strand at 41.931 kb on - strand at 41.987 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.006 kb on + strand at 42.007 kb on - strand at 42.007 kb on - strand at 42.007 kb on - strand at 42.007 kb on - strand at 42.007 kb on - strand at 42.007 kb on - strand at 42.007 kb on - strand at 42.007 kb on - strand at 42.007 kb on - strand at 42.007 kb on - strand at 42.008 kb on + strand at 42.034 kb on - strand at 42.092 kb on + strand at 42.092 kb on + strand at 42.092 kb on + strand at 42.092 kb on + strand at 42.093 kb on - strand at 42.093 kb on - strand at 42.093 kb on - strand at 42.097 kb on + strand at 42.097 kb on + strand at 42.098 kb on - strand at 42.118 kb on - strand at 42.137 kb on + strand, within EX31_RS11910 at 42.138 kb on - strand, within EX31_RS11910 at 42.207 kb on + strand, within EX31_RS11910 at 42.208 kb on - strand, within EX31_RS11910 at 42.234 kb on + strand, within EX31_RS11910 at 42.296 kb on + strand, within EX31_RS11910 at 42.296 kb on + strand, within EX31_RS11910 at 42.296 kb on + strand, within EX31_RS11910 at 42.419 kb on + strand, within EX31_RS11910 at 42.449 kb on + strand, within EX31_RS11910 at 42.449 kb on + strand, within EX31_RS11910 at 42.450 kb on - strand, within EX31_RS11910 at 42.691 kb on - strand, within EX31_RS11910 at 42.826 kb on + strand, within EX31_RS11910 at 42.857 kb on + strand, within EX31_RS11910 at 42.861 kb on + strand, within EX31_RS11910 at 42.862 kb on - strand, within EX31_RS11910 at 42.862 kb on - strand, within EX31_RS11910 at 43.033 kb on - strand, within EX31_RS11910 at 43.063 kb on - strand, within EX31_RS11910 at 43.203 kb on + strand at 43.203 kb on + strand at 43.204 kb on - strand at 43.216 kb on + strand at 43.216 kb on + strand at 43.217 kb on - strand at 43.217 kb on - strand at 43.217 kb on - strand at 43.217 kb on - strand at 43.260 kb on - strand at 43.271 kb on - strand at 43.282 kb on + strand at 43.331 kb on - strand at 43.331 kb on - strand at 43.331 kb on - strand at 43.448 kb on + strand, within EX31_RS11915 at 43.448 kb on + strand, within EX31_RS11915 at 43.448 kb on + strand, within EX31_RS11915 at 43.448 kb on + strand, within EX31_RS11915 at 43.449 kb on - strand, within EX31_RS11915 at 43.449 kb on - strand, within EX31_RS11915 at 43.449 kb on - strand, within EX31_RS11915 at 43.449 kb on - strand, within EX31_RS11915 at 43.449 kb on - strand, within EX31_RS11915 at 43.449 kb on - strand, within EX31_RS11915 at 43.449 kb on - strand, within EX31_RS11915 at 43.449 kb on - strand, within EX31_RS11915 at 43.581 kb on - strand, within EX31_RS11915 at 43.581 kb on - strand, within EX31_RS11915 at 43.689 kb on + strand, within EX31_RS11915 at 43.692 kb on - strand, within EX31_RS11915 at 43.692 kb on - strand, within EX31_RS11915 at 43.692 kb on - strand, within EX31_RS11915 at 43.692 kb on - strand, within EX31_RS11915 at 43.699 kb on - strand, within EX31_RS11915 at 43.699 kb on - strand, within EX31_RS11915 at 43.699 kb on - strand, within EX31_RS11915 at 43.791 kb on + strand, within EX31_RS11915 at 43.791 kb on + strand, within EX31_RS11915 at 43.817 kb on + strand, within EX31_RS11915 at 43.817 kb on + strand, within EX31_RS11915 at 43.817 kb on + strand, within EX31_RS11915 at 43.817 kb on + strand, within EX31_RS11915 at 43.817 kb on + strand, within EX31_RS11915 at 43.818 kb on - strand, within EX31_RS11915 at 43.818 kb on - strand, within EX31_RS11915 at 44.024 kb on + strand at 44.024 kb on + strand at 44.025 kb on - strand at 44.025 kb on - strand at 44.025 kb on - strand at 44.085 kb on + strand at 44.085 kb on + strand at 44.086 kb on - strand at 44.098 kb on + strand at 44.098 kb on + strand at 44.098 kb on + strand at 44.099 kb on - strand at 44.099 kb on - strand at 44.099 kb on - strand at 44.099 kb on - strand at 44.099 kb on - strand at 44.099 kb on - strand at 44.099 kb on - strand at 44.099 kb on - strand at 44.099 kb on - strand at 44.099 kb on - strand at 44.202 kb on + strand at 44.203 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 41,017 + +0.7 41,081 + +0.4 41,081 + -0.2 41,081 + +0.2 41,082 - +0.6 41,082 - +0.6 41,083 + -0.1 41,083 + -0.7 41,083 + -0.0 41,084 - +0.3 41,107 + +0.7 41,108 - +0.2 41,159 + EX31_RS11905 0.16 +0.9 41,159 + EX31_RS11905 0.16 +0.1 41,160 - EX31_RS11905 0.16 +0.1 41,160 - EX31_RS11905 0.16 +0.2 41,160 - EX31_RS11905 0.16 -2.3 41,204 + EX31_RS11905 0.22 +0.4 41,205 - EX31_RS11905 0.22 -0.1 41,229 + EX31_RS11905 0.26 +1.0 41,229 + EX31_RS11905 0.26 +0.6 41,229 + EX31_RS11905 0.26 +0.7 41,229 + EX31_RS11905 0.26 +0.7 41,229 + EX31_RS11905 0.26 -0.6 41,229 + EX31_RS11905 0.26 -1.0 41,229 + EX31_RS11905 0.26 +0.6 41,229 + EX31_RS11905 0.26 +0.5 41,229 + EX31_RS11905 0.26 +0.2 41,229 + EX31_RS11905 0.26 -0.1 41,229 + EX31_RS11905 0.26 +0.6 41,229 + EX31_RS11905 0.26 +0.8 41,229 + EX31_RS11905 0.26 +0.1 41,230 - EX31_RS11905 0.26 +0.9 41,230 - EX31_RS11905 0.26 +0.6 41,230 - EX31_RS11905 0.26 -0.2 41,230 - EX31_RS11905 0.26 +0.1 41,230 - EX31_RS11905 0.26 -1.0 41,230 - EX31_RS11905 0.26 -1.1 41,230 - EX31_RS11905 0.26 +1.7 41,230 - EX31_RS11905 0.26 +0.1 41,230 - EX31_RS11905 0.26 -0.1 41,230 - EX31_RS11905 0.26 -0.6 41,230 - EX31_RS11905 0.26 -0.1 41,315 - EX31_RS11905 0.37 -2.5 41,315 - EX31_RS11905 0.37 +0.4 41,339 + EX31_RS11905 0.40 +0.0 41,339 + EX31_RS11905 0.40 -3.0 41,339 + EX31_RS11905 0.40 -0.9 41,339 + EX31_RS11905 0.40 -0.7 41,339 + EX31_RS11905 0.40 +0.9 41,340 - EX31_RS11905 0.40 -1.2 41,340 - EX31_RS11905 0.40 +0.0 41,430 + EX31_RS11905 0.52 -0.7 41,430 + EX31_RS11905 0.52 -0.0 41,430 + EX31_RS11905 0.52 +0.8 41,430 + EX31_RS11905 0.52 +0.6 41,431 - EX31_RS11905 0.53 -0.9 41,431 - EX31_RS11905 0.53 -0.0 41,431 - EX31_RS11905 0.53 -0.2 41,431 - EX31_RS11905 0.53 -0.1 41,431 - EX31_RS11905 0.53 +0.1 41,435 + EX31_RS11905 0.53 +0.2 41,436 - EX31_RS11905 0.53 +0.4 41,436 - EX31_RS11905 0.53 +0.2 41,447 + EX31_RS11905 0.55 +0.0 41,448 - EX31_RS11905 0.55 -0.3 41,448 - EX31_RS11905 0.55 -0.8 41,448 - EX31_RS11905 0.55 -0.1 41,595 + EX31_RS11905 0.74 +0.4 41,595 + EX31_RS11905 0.74 +0.5 41,596 - EX31_RS11905 0.75 -1.2 41,669 - EX31_RS11905 0.84 +1.4 41,669 - EX31_RS11905 0.84 -0.2 41,669 - EX31_RS11905 0.84 +0.1 41,669 - EX31_RS11905 0.84 +1.3 41,759 + +0.1 41,759 + -0.6 41,825 + -0.3 41,825 + -1.1 41,825 + -0.4 41,826 - -1.5 41,826 - -0.1 41,826 - -1.6 41,826 - +0.2 41,826 - -0.8 41,871 + +0.5 41,901 + +0.3 41,901 + +0.1 41,901 + +0.3 41,901 + +0.8 41,901 + +0.6 41,901 + +0.6 41,901 + -0.6 41,901 + -0.1 41,901 + +0.5 41,901 + +0.5 41,901 + +0.2 41,901 + -0.5 41,901 + +0.2 41,901 + -1.8 41,901 + -0.1 41,901 + +0.5 41,901 + +0.1 41,901 + -0.2 41,901 + -0.8 41,901 + -0.1 41,901 + -0.4 41,901 + -0.8 41,901 + +1.0 41,901 + -0.2 41,901 + -0.2 41,901 + -0.4 41,901 + -0.1 41,901 + +0.9 41,901 + -0.2 41,901 + -0.5 41,902 - +0.6 41,902 - -0.1 41,902 - -0.2 41,902 - -0.3 41,902 - -1.0 41,902 - +0.1 41,902 - -0.5 41,902 - +0.8 41,902 - +0.2 41,902 - -0.9 41,902 - -1.7 41,902 - +0.4 41,902 - +0.9 41,902 - -0.1 41,902 - -0.7 41,902 - +0.8 41,902 - -0.0 41,902 - +1.4 41,902 - +0.7 41,902 - +0.4 41,902 - -0.1 41,930 + +0.3 41,931 - +0.1 41,987 + -0.3 42,006 + -1.3 42,006 + -1.1 42,006 + -1.1 42,006 + +0.2 42,006 + -1.5 42,006 + +0.1 42,006 + +0.4 42,006 + -1.6 42,006 + -1.2 42,006 + +0.7 42,006 + +0.7 42,006 + +1.0 42,006 + -1.5 42,006 + -0.8 42,006 + -0.8 42,006 + -3.5 42,006 + +1.3 42,006 + +0.5 42,006 + +0.5 42,006 + -0.2 42,006 + -0.1 42,007 - -1.7 42,007 - -2.3 42,007 - -1.9 42,007 - +0.0 42,007 - -0.1 42,007 - +0.3 42,007 - -0.3 42,007 - +0.4 42,007 - -0.8 42,007 - -0.6 42,008 + -2.3 42,034 - -0.3 42,092 + -0.7 42,092 + -1.4 42,092 + -0.1 42,092 + -1.9 42,093 - +0.1 42,093 - -1.6 42,093 - +0.9 42,097 + +0.7 42,097 + -2.0 42,098 - -0.8 42,118 - -0.7 42,137 + EX31_RS11910 0.10 -1.2 42,138 - EX31_RS11910 0.11 -1.2 42,207 + EX31_RS11910 0.16 -0.1 42,208 - EX31_RS11910 0.16 +0.2 42,234 + EX31_RS11910 0.19 -1.1 42,296 + EX31_RS11910 0.24 -0.1 42,296 + EX31_RS11910 0.24 -2.7 42,296 + EX31_RS11910 0.24 -0.6 42,419 + EX31_RS11910 0.34 -0.7 42,449 + EX31_RS11910 0.37 +1.7 42,449 + EX31_RS11910 0.37 -1.6 42,450 - EX31_RS11910 0.37 +0.0 42,691 - EX31_RS11910 0.57 -0.5 42,826 + EX31_RS11910 0.68 -0.7 42,857 + EX31_RS11910 0.71 +0.0 42,861 + EX31_RS11910 0.71 -1.3 42,862 - EX31_RS11910 0.71 -0.3 42,862 - EX31_RS11910 0.71 -0.6 43,033 - EX31_RS11910 0.86 +0.4 43,063 - EX31_RS11910 0.88 -0.1 43,203 + -0.5 43,203 + +0.1 43,204 - -0.1 43,216 + -0.4 43,216 + +0.6 43,217 - +0.4 43,217 - -0.4 43,217 - +0.3 43,217 - +1.3 43,260 - -0.1 43,271 - +0.4 43,282 + -0.0 43,331 - +0.9 43,331 - +0.2 43,331 - -0.5 43,448 + EX31_RS11915 0.18 -0.3 43,448 + EX31_RS11915 0.18 +1.0 43,448 + EX31_RS11915 0.18 +0.5 43,448 + EX31_RS11915 0.18 -1.0 43,449 - EX31_RS11915 0.18 -0.2 43,449 - EX31_RS11915 0.18 +0.3 43,449 - EX31_RS11915 0.18 +0.5 43,449 - EX31_RS11915 0.18 +0.3 43,449 - EX31_RS11915 0.18 +0.3 43,449 - EX31_RS11915 0.18 +0.2 43,449 - EX31_RS11915 0.18 -0.2 43,449 - EX31_RS11915 0.18 -0.7 43,581 - EX31_RS11915 0.35 +0.7 43,581 - EX31_RS11915 0.35 +0.1 43,689 + EX31_RS11915 0.48 +1.3 43,692 - EX31_RS11915 0.49 +1.0 43,692 - EX31_RS11915 0.49 -1.2 43,692 - EX31_RS11915 0.49 -0.5 43,692 - EX31_RS11915 0.49 +0.1 43,699 - EX31_RS11915 0.50 +0.6 43,699 - EX31_RS11915 0.50 -0.1 43,699 - EX31_RS11915 0.50 -2.7 43,791 + EX31_RS11915 0.61 +0.4 43,791 + EX31_RS11915 0.61 -0.5 43,817 + EX31_RS11915 0.65 -0.0 43,817 + EX31_RS11915 0.65 +0.7 43,817 + EX31_RS11915 0.65 +0.5 43,817 + EX31_RS11915 0.65 +1.4 43,817 + EX31_RS11915 0.65 +0.2 43,818 - EX31_RS11915 0.65 +0.1 43,818 - EX31_RS11915 0.65 -0.2 44,024 + +0.0 44,024 + -0.5 44,025 - -0.6 44,025 - -1.3 44,025 - -0.4 44,085 + +0.1 44,085 + +0.5 44,086 - -0.8 44,098 + +0.5 44,098 + +0.4 44,098 + -1.6 44,099 - +1.6 44,099 - +1.0 44,099 - -1.5 44,099 - -0.4 44,099 - +0.0 44,099 - +0.6 44,099 - -0.2 44,099 - -0.2 44,099 - -0.5 44,099 - -0.3 44,202 + +0.7 44,203 - -0.1
Or see this region's nucleotide sequence