Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS09715 and EX31_RS09720 overlap by 4 nucleotides EX31_RS09720 and EX31_RS09725 are separated by 66 nucleotides
EX31_RS09715: EX31_RS09715 - M20 family metallopeptidase, at 143,321 to 144,742
_RS09715
EX31_RS09720: EX31_RS09720 - MFS transporter, at 144,739 to 146,022
_RS09720
EX31_RS09725: EX31_RS09725 - PQQ-dependent sugar dehydrogenase, at 146,089 to 147,240
_RS09725
Position (kb) 144
145
146
147 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 143.982 kb on - strand, within EX31_RS09715 at 144.072 kb on + strand, within EX31_RS09715 at 144.089 kb on - strand, within EX31_RS09715 at 144.215 kb on + strand, within EX31_RS09715 at 144.215 kb on + strand, within EX31_RS09715 at 144.216 kb on - strand, within EX31_RS09715 at 144.216 kb on - strand, within EX31_RS09715 at 144.226 kb on + strand, within EX31_RS09715 at 144.312 kb on + strand, within EX31_RS09715 at 144.715 kb on + strand at 144.715 kb on + strand at 144.716 kb on - strand at 144.716 kb on - strand at 144.749 kb on + strand at 144.749 kb on + strand at 144.766 kb on - strand at 144.877 kb on + strand, within EX31_RS09720 at 144.878 kb on - strand, within EX31_RS09720 at 144.878 kb on - strand, within EX31_RS09720 at 144.893 kb on - strand, within EX31_RS09720 at 145.071 kb on + strand, within EX31_RS09720 at 145.071 kb on + strand, within EX31_RS09720 at 145.072 kb on - strand, within EX31_RS09720 at 145.073 kb on + strand, within EX31_RS09720 at 145.074 kb on - strand, within EX31_RS09720 at 145.115 kb on + strand, within EX31_RS09720 at 145.329 kb on + strand, within EX31_RS09720 at 145.370 kb on + strand, within EX31_RS09720 at 145.372 kb on + strand, within EX31_RS09720 at 145.372 kb on + strand, within EX31_RS09720 at 145.372 kb on + strand, within EX31_RS09720 at 145.372 kb on + strand, within EX31_RS09720 at 145.386 kb on + strand, within EX31_RS09720 at 145.500 kb on + strand, within EX31_RS09720 at 145.513 kb on + strand, within EX31_RS09720 at 145.513 kb on + strand, within EX31_RS09720 at 145.513 kb on + strand, within EX31_RS09720 at 145.513 kb on + strand, within EX31_RS09720 at 145.513 kb on + strand, within EX31_RS09720 at 145.513 kb on + strand, within EX31_RS09720 at 145.513 kb on + strand, within EX31_RS09720 at 145.513 kb on + strand, within EX31_RS09720 at 145.513 kb on + strand, within EX31_RS09720 at 145.514 kb on - strand, within EX31_RS09720 at 145.514 kb on - strand, within EX31_RS09720 at 145.514 kb on - strand, within EX31_RS09720 at 145.514 kb on - strand, within EX31_RS09720 at 145.514 kb on - strand, within EX31_RS09720 at 145.515 kb on + strand, within EX31_RS09720 at 145.515 kb on + strand, within EX31_RS09720 at 145.515 kb on + strand, within EX31_RS09720 at 145.516 kb on - strand, within EX31_RS09720 at 145.525 kb on + strand, within EX31_RS09720 at 145.525 kb on + strand, within EX31_RS09720 at 145.537 kb on + strand, within EX31_RS09720 at 145.680 kb on + strand, within EX31_RS09720 at 145.680 kb on + strand, within EX31_RS09720 at 145.681 kb on - strand, within EX31_RS09720 at 145.681 kb on - strand, within EX31_RS09720 at 145.865 kb on - strand, within EX31_RS09720 at 145.958 kb on - strand at 145.958 kb on - strand at 146.144 kb on + strand at 146.144 kb on + strand at 146.144 kb on + strand at 146.317 kb on - strand, within EX31_RS09725 at 146.319 kb on - strand, within EX31_RS09725 at 146.319 kb on - strand, within EX31_RS09725 at 146.361 kb on - strand, within EX31_RS09725 at 146.423 kb on + strand, within EX31_RS09725 at 146.424 kb on - strand, within EX31_RS09725 at 146.424 kb on - strand, within EX31_RS09725 at 146.457 kb on - strand, within EX31_RS09725 at 146.464 kb on - strand, within EX31_RS09725 at 146.541 kb on + strand, within EX31_RS09725 at 146.542 kb on - strand, within EX31_RS09725 at 146.542 kb on - strand, within EX31_RS09725 at 146.562 kb on + strand, within EX31_RS09725 at 146.795 kb on - strand, within EX31_RS09725 at 146.903 kb on + strand, within EX31_RS09725 at 146.903 kb on + strand, within EX31_RS09725
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 143,982 - EX31_RS09715 0.46 +0.9 144,072 + EX31_RS09715 0.53 -1.1 144,089 - EX31_RS09715 0.54 +0.1 144,215 + EX31_RS09715 0.63 -0.8 144,215 + EX31_RS09715 0.63 -2.0 144,216 - EX31_RS09715 0.63 -0.2 144,216 - EX31_RS09715 0.63 -1.5 144,226 + EX31_RS09715 0.64 -0.1 144,312 + EX31_RS09715 0.70 +0.9 144,715 + -0.2 144,715 + +0.1 144,716 - +0.0 144,716 - +0.6 144,749 + -0.6 144,749 + -1.2 144,766 - +0.6 144,877 + EX31_RS09720 0.11 -0.7 144,878 - EX31_RS09720 0.11 -2.9 144,878 - EX31_RS09720 0.11 -0.6 144,893 - EX31_RS09720 0.12 +0.7 145,071 + EX31_RS09720 0.26 +0.3 145,071 + EX31_RS09720 0.26 +0.5 145,072 - EX31_RS09720 0.26 +0.8 145,073 + EX31_RS09720 0.26 -0.1 145,074 - EX31_RS09720 0.26 +0.3 145,115 + EX31_RS09720 0.29 +2.1 145,329 + EX31_RS09720 0.46 +1.5 145,370 + EX31_RS09720 0.49 -2.7 145,372 + EX31_RS09720 0.49 +1.0 145,372 + EX31_RS09720 0.49 +1.4 145,372 + EX31_RS09720 0.49 +1.5 145,372 + EX31_RS09720 0.49 +1.9 145,386 + EX31_RS09720 0.50 +0.1 145,500 + EX31_RS09720 0.59 -0.7 145,513 + EX31_RS09720 0.60 -1.1 145,513 + EX31_RS09720 0.60 +0.6 145,513 + EX31_RS09720 0.60 -0.5 145,513 + EX31_RS09720 0.60 +1.1 145,513 + EX31_RS09720 0.60 -2.4 145,513 + EX31_RS09720 0.60 -2.0 145,513 + EX31_RS09720 0.60 +1.0 145,513 + EX31_RS09720 0.60 +1.0 145,513 + EX31_RS09720 0.60 -0.3 145,514 - EX31_RS09720 0.60 +0.7 145,514 - EX31_RS09720 0.60 -3.2 145,514 - EX31_RS09720 0.60 +1.1 145,514 - EX31_RS09720 0.60 +2.0 145,514 - EX31_RS09720 0.60 +1.6 145,515 + EX31_RS09720 0.60 -0.1 145,515 + EX31_RS09720 0.60 -0.3 145,515 + EX31_RS09720 0.60 +1.9 145,516 - EX31_RS09720 0.61 -1.4 145,525 + EX31_RS09720 0.61 +0.1 145,525 + EX31_RS09720 0.61 +1.5 145,537 + EX31_RS09720 0.62 +0.1 145,680 + EX31_RS09720 0.73 +1.1 145,680 + EX31_RS09720 0.73 +1.3 145,681 - EX31_RS09720 0.73 -2.4 145,681 - EX31_RS09720 0.73 -0.0 145,865 - EX31_RS09720 0.88 -0.1 145,958 - +0.5 145,958 - +0.5 146,144 + +0.4 146,144 + +1.9 146,144 + -0.7 146,317 - EX31_RS09725 0.20 +0.5 146,319 - EX31_RS09725 0.20 +0.8 146,319 - EX31_RS09725 0.20 -0.1 146,361 - EX31_RS09725 0.24 -0.5 146,423 + EX31_RS09725 0.29 +0.0 146,424 - EX31_RS09725 0.29 +0.9 146,424 - EX31_RS09725 0.29 +0.4 146,457 - EX31_RS09725 0.32 +0.9 146,464 - EX31_RS09725 0.33 -0.7 146,541 + EX31_RS09725 0.39 -0.6 146,542 - EX31_RS09725 0.39 -0.7 146,542 - EX31_RS09725 0.39 +0.5 146,562 + EX31_RS09725 0.41 -0.9 146,795 - EX31_RS09725 0.61 +0.3 146,903 + EX31_RS09725 0.71 -2.1 146,903 + EX31_RS09725 0.71 -0.4
Or see this region's nucleotide sequence