Strain Fitness in Rahnella sp. WP5 around EX31_RS05040

Experiment: MGL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MGL
139,222	-				+0.4
139,245	-				-0.0
139,245	-				+0.0
139,285	-				-0.1
139,285	-				+0.4
139,285	-				-0.6
139,285	-				-0.3
139,285	-				-0.7
139,285	-				-0.1
139,285	-				-0.1
139,327	+				-0.2
139,327	+				+1.2
139,327	+				-1.5
139,327	+				-0.2
139,328	-				+0.0
139,328	-				+0.2
139,328	-				-0.2
139,328	-				+0.5
139,328	-				-0.2
139,328	-				-0.1
139,328	-				-0.4
139,328	-				+0.4
139,328	-				+1.5
139,328	-				+0.9
139,328	-				+0.5
139,328	-				-0.5
139,328	-				+0.6
139,328	-				-0.1
139,328	-				-0.3
139,328	-				-1.1
139,328	-				+0.5
139,336	-				+0.1
139,336	-				-0.4
139,344	+				+0.6
139,345	-				+1.0
139,348	-				-1.9
139,348	-				-1.4
139,348	-				+0.7
139,366	+				-0.7
139,373	+				+0.6
139,373	+				+0.3
139,373	+				-0.9
139,374	-				+1.1
139,374	-				-0.2
139,374	-				+0.4
139,374	-				+0.9
139,374	-				+0.1
139,374	-				-0.5
139,385	+				+0.5
139,385	-				-0.1
139,386	-				+0.4
139,386	-				+0.4
139,386	-				+0.0
139,386	-				-1.0
139,389	-				-0.1
139,401	+				+0.1
139,401	+				+0.7
139,401	+				+0.8
139,401	+				+0.0
139,401	+				-0.4
139,402	-				+0.5
139,402	-				+0.1
139,402	-				+0.3
139,402	-				-0.1
139,402	-				-2.3
139,403	+				+0.2
139,404	-				+0.1
139,404	-				-0.7
139,404	-				-0.5
139,404	-				+0.0
139,404	-				+0.3
139,404	-				-0.6
139,424	+				+0.7
139,424	+				-0.9
139,424	+				+0.3
139,424	+				+0.1
139,425	-				-0.9
139,425	-				+0.3
139,425	-				-0.7
139,425	-				-0.4
139,425	-				+0.1
139,425	-				-0.4
139,425	-				+0.5
139,467	-				-0.1
139,471	-				+0.7
139,500	+		EX31_RS05035	0.12	+0.1
139,501	-		EX31_RS05035	0.12	-0.5
139,512	-		EX31_RS05035	0.14	-0.3
139,628	+		EX31_RS05035	0.34	-0.0
139,628	+		EX31_RS05035	0.34	-2.8
139,628	+		EX31_RS05035	0.34	+0.8
139,628	+		EX31_RS05035	0.34	-0.3
139,629	-		EX31_RS05035	0.34	-0.3
139,629	-		EX31_RS05035	0.34	-1.6
139,629	-		EX31_RS05035	0.34	-0.3
139,629	-		EX31_RS05035	0.34	+0.1
139,629	-		EX31_RS05035	0.34	-0.7
139,629	-		EX31_RS05035	0.34	+0.4
139,629	-		EX31_RS05035	0.34	-0.5
139,629	-		EX31_RS05035	0.34	+0.4
139,632	+		EX31_RS05035	0.34	-0.5
139,659	+		EX31_RS05035	0.39	+0.4
139,662	+		EX31_RS05035	0.39	+0.8
139,662	+		EX31_RS05035	0.39	+0.1
139,662	+		EX31_RS05035	0.39	+0.0
139,663	-		EX31_RS05035	0.39	+0.5
139,663	-		EX31_RS05035	0.39	-0.6
139,663	-		EX31_RS05035	0.39	+0.1
139,680	+		EX31_RS05035	0.42	+0.6
139,751	+		EX31_RS05035	0.54	-0.4
140,008	+				+0.1
140,009	-				+0.0
140,009	-				+0.2
140,009	-				-0.2
140,020	+				-0.2
140,021	-				+2.5
140,021	-				+0.3
140,067	+				-0.4
140,067	+				-0.4
140,067	+				+0.1
140,068	-				-1.5
140,089	-				+0.0
140,197	+		EX31_RS05040	0.41	+0.4
140,197	+		EX31_RS05040	0.41	+1.0
140,197	+		EX31_RS05040	0.41	+1.4
140,198	-		EX31_RS05040	0.42	-3.7
140,198	-		EX31_RS05040	0.42	-3.7
140,198	-		EX31_RS05040	0.42	-0.8
140,198	-		EX31_RS05040	0.42	-1.7
140,198	-		EX31_RS05040	0.42	-2.5
140,198	-		EX31_RS05040	0.42	-0.0
140,198	-		EX31_RS05040	0.42	-3.1
140,229	+		EX31_RS05040	0.52	-1.4
140,230	-		EX31_RS05040	0.53	-0.9
140,230	-		EX31_RS05040	0.53	-0.9
140,230	-		EX31_RS05040	0.53	-0.0
140,230	-		EX31_RS05040	0.53	-0.8
140,258	-		EX31_RS05040	0.62	+3.0
140,258	-		EX31_RS05040	0.62	+0.4
140,373	-				-2.9
140,373	-				-2.2
140,373	-				-2.4
140,398	+				-2.2
140,398	+				-2.4
140,398	+				+0.4
140,398	+				+0.3
140,398	+				-1.4
140,399	-				+0.2
140,399	-				+0.6
140,399	-				+0.2
140,399	-				+0.6
140,399	-				+0.6
140,399	-				-1.0
140,498	+		EX31_RS05045	0.35	-0.5
140,499	-		EX31_RS05045	0.36	-0.9
140,499	-		EX31_RS05045	0.36	-0.6
140,499	-		EX31_RS05045	0.36	-0.6
140,499	-		EX31_RS05045	0.36	-0.3
140,499	-		EX31_RS05045	0.36	-0.1
140,499	-		EX31_RS05045	0.36	+0.0
140,504	+		EX31_RS05045	0.37	+0.0
140,504	+		EX31_RS05045	0.37	+0.2
140,504	+		EX31_RS05045	0.37	-1.5
140,505	-		EX31_RS05045	0.38	+1.7
140,505	-		EX31_RS05045	0.38	-0.5
140,505	-		EX31_RS05045	0.38	+0.0
140,505	-		EX31_RS05045	0.38	-0.9
140,505	-		EX31_RS05045	0.38	+0.8
140,505	-		EX31_RS05045	0.38	+0.0
140,603	+		EX31_RS05045	0.68	-0.1
140,615	+		EX31_RS05045	0.72	-1.0
140,615	+		EX31_RS05045	0.72	+0.2
140,615	+		EX31_RS05045	0.72	-0.2
140,615	+		EX31_RS05045	0.72	+0.5
140,615	+		EX31_RS05045	0.72	+0.8
140,615	+		EX31_RS05045	0.72	-0.9
140,616	-		EX31_RS05045	0.72	-0.3
140,633	+		EX31_RS05045	0.77	-0.5
140,700	-				+0.3
140,700	-				-0.8
140,707	-				+0.1
140,707	-				+0.1
140,707	-				-0.0
140,738	+				-0.4
140,742	-				-0.6
140,790	+				-0.9
140,818	+				+0.6
140,818	+				-1.1
140,818	+				+0.3
140,818	+				+1.5
140,818	+				-0.4
140,818	+				+0.2
140,818	+				-0.4
140,818	+				-0.5
140,818	+				+0.7
140,818	+				+0.5
140,818	+				-0.4
140,818	+				+0.2
140,819	-				+1.5
140,819	-				-2.7
140,819	-				-0.2
140,819	-				-0.4
140,819	-				+0.4
140,820	+				+1.2
140,820	+				+0.2
140,820	+				-0.2
140,820	+				-0.5
140,820	+				+0.1
140,821	-				-0.9
140,821	-				+0.1
140,821	-				+0.4
140,821	-				+0.1
140,825	+				+0.1
140,825	+				+0.3
140,826	-				-0.4
140,826	-				+0.5
140,826	-				-0.4
140,945	-				-0.4
140,945	-				-0.8
140,945	-				-0.2
141,184	+		EX31_RS05050	0.26	+0.3
141,184	+		EX31_RS05050	0.26	-0.3
141,185	-		EX31_RS05050	0.26	-1.3
141,185	-		EX31_RS05050	0.26	-0.8
141,218	+		EX31_RS05050	0.29	-2.6
141,218	+		EX31_RS05050	0.29	-1.1
141,244	-		EX31_RS05050	0.31	+0.2
141,305	+		EX31_RS05050	0.35	+0.4
141,305	+		EX31_RS05050	0.35	-0.6
141,306	-		EX31_RS05050	0.36	+0.1