Strain Fitness in Rahnella sp. WP5 around EX31_RS04490

Experiment: MGL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MGL
7,146	+		EX31_RS04480	0.81	-0.8
7,181	+				+0.1
7,182	-				+0.3
7,234	+				+0.0
7,234	+				-0.8
7,234	+				-0.8
7,235	-				+0.5
7,235	-				+0.2
7,235	-				+0.2
7,235	-				+0.5
7,235	-				-0.4
7,236	+				+0.3
7,236	+				-1.6
7,236	+				+0.3
7,237	-				+0.3
7,237	-				+0.6
7,237	-				+0.5
7,297	+				-0.1
7,298	-				-0.2
7,618	+		EX31_RS04485	0.60	-0.5
7,619	-		EX31_RS04485	0.60	+0.1
7,619	-		EX31_RS04485	0.60	-1.2
7,647	+		EX31_RS04485	0.65	+0.2
7,647	+		EX31_RS04485	0.65	-1.2
7,647	+		EX31_RS04485	0.65	-0.9
7,647	+		EX31_RS04485	0.65	-0.4
7,647	+		EX31_RS04485	0.65	+0.3
7,647	+		EX31_RS04485	0.65	-1.1
7,648	-		EX31_RS04485	0.65	+0.7
7,648	-		EX31_RS04485	0.65	+0.6
7,657	-		EX31_RS04485	0.67	+0.6
7,679	+		EX31_RS04485	0.70	-0.8
7,679	+		EX31_RS04485	0.70	+1.1
7,679	+		EX31_RS04485	0.70	-0.0
7,680	-		EX31_RS04485	0.70	-1.1
7,680	-		EX31_RS04485	0.70	+0.8
7,680	-		EX31_RS04485	0.70	-0.5
7,680	-		EX31_RS04485	0.70	-0.8
7,680	-		EX31_RS04485	0.70	+0.6
7,680	-		EX31_RS04485	0.70	+1.5
7,680	-		EX31_RS04485	0.70	-0.0
7,680	-		EX31_RS04485	0.70	-0.2
7,680	-		EX31_RS04485	0.70	-0.3
7,680	-		EX31_RS04485	0.70	+0.0
7,680	-		EX31_RS04485	0.70	-0.0
7,680	-		EX31_RS04485	0.70	-0.7
7,680	-		EX31_RS04485	0.70	-0.0
7,680	-		EX31_RS04485	0.70	-0.3
7,688	+		EX31_RS04485	0.72	-0.3
7,688	+		EX31_RS04485	0.72	-1.0
7,688	+		EX31_RS04485	0.72	-1.7
7,688	+		EX31_RS04485	0.72	-0.8
7,688	+		EX31_RS04485	0.72	+0.8
7,688	+		EX31_RS04485	0.72	-0.1
7,688	+		EX31_RS04485	0.72	+0.8
7,688	+		EX31_RS04485	0.72	+0.6
7,689	-		EX31_RS04485	0.72	-0.2
7,689	-		EX31_RS04485	0.72	+0.1
7,759	-		EX31_RS04485	0.83	-0.7
7,759	-		EX31_RS04485	0.83	-0.7
7,810	+				-0.6
7,810	+				-0.3
7,810	+				-1.1
7,810	+				+0.5
7,811	-				-0.7
7,811	-				+0.4
7,814	+				-1.4
7,814	+				-0.2
7,814	+				+0.1
7,815	-				-0.2
7,815	-				-0.4
7,815	-				-0.8
7,821	+				-0.5
7,821	+				-1.3
7,850	+				-0.2
7,861	+				-0.5
7,861	+				-0.4
7,862	-				+0.0
7,862	-				-0.3
7,862	-				+0.4
7,862	-				+0.2
7,868	+				-0.2
7,869	-				+1.2
7,869	-				-1.2
7,907	+				-0.7
7,907	+				+0.2
7,907	+				-0.0
7,908	-				-0.4
7,908	-				-0.2
7,932	+				-0.1
7,932	+				+0.0
7,933	-				+0.8
7,933	-				-0.2
7,933	-				+0.8
7,986	-				+0.2
8,003	+				-1.4
8,003	+				-0.7
8,004	-				+0.2
8,024	+				-1.1
8,024	+				-0.5
8,024	+				-1.2
8,025	-				+0.2
8,027	+				-0.0
8,027	+				-0.8
8,027	+				+0.2
8,027	+				+1.0
8,028	-				-0.6
8,028	-				+0.3
8,052	+				+0.3
8,053	-				-0.0
8,058	+				-1.2
8,059	-				-1.1
8,059	-				+0.4
8,059	-				+0.2
8,059	-				-0.1
8,075	-				-0.3
8,075	-				-1.5
8,075	-				-0.2
8,075	-				+0.8
8,186	+		EX31_RS04490	0.63	-0.2
8,187	-		EX31_RS04490	0.64	-0.8
8,197	+		EX31_RS04490	0.69	-0.3
8,197	+		EX31_RS04490	0.69	+0.3
8,197	+		EX31_RS04490	0.69	-3.2
8,197	+		EX31_RS04490	0.69	+1.1
8,197	+		EX31_RS04490	0.69	+0.2
8,198	-		EX31_RS04490	0.69	+0.0
8,198	-		EX31_RS04490	0.69	-2.3
8,209	+		EX31_RS04490	0.75	-0.5
8,209	+		EX31_RS04490	0.75	-1.2
8,209	+		EX31_RS04490	0.75	+0.4
8,209	+		EX31_RS04490	0.75	-0.4
8,210	-		EX31_RS04490	0.75	-0.2
8,210	-		EX31_RS04490	0.75	-0.5
8,210	-		EX31_RS04490	0.75	+0.1
8,210	-		EX31_RS04490	0.75	-0.3
8,210	-		EX31_RS04490	0.75	-1.2
8,254	+				-0.8
8,254	+				+0.9
8,254	+				+0.8
8,255	-				+1.0
8,255	-				-0.6
8,255	-				-1.7
8,255	-				-1.0
8,263	+				+0.1
8,263	+				-0.7
8,263	+				-0.4
8,263	+				-0.5
8,263	+				-0.0
8,263	+				-0.6
8,263	+				-0.0
8,263	+				-0.7
8,264	-				-1.2
8,264	-				-0.7
8,264	-				-0.0
8,264	-				-0.4
8,264	-				-0.6
8,264	-				-0.1
8,264	-				+1.0
8,264	-				-0.1
8,264	-				-0.0
8,264	-				+0.2
8,264	-				-0.1
8,264	-				-0.9
8,264	-				+0.6
8,264	-				+0.2
8,264	-				-1.1
8,264	-				+0.3
8,381	-				-0.3
8,524	-		EX31_RS04495	0.10	-0.6
8,584	+		EX31_RS04495	0.14	+0.1
8,613	-		EX31_RS04495	0.15	-0.2
8,696	+		EX31_RS04495	0.20	+0.1
8,697	-		EX31_RS04495	0.20	-1.8
8,697	-		EX31_RS04495	0.20	+0.6
8,697	-		EX31_RS04495	0.20	-0.1
8,697	-		EX31_RS04495	0.20	-0.2
8,697	-		EX31_RS04495	0.20	-1.0
8,716	+		EX31_RS04495	0.21	-0.8
8,716	+		EX31_RS04495	0.21	+0.3
8,716	+		EX31_RS04495	0.21	-0.2
8,716	+		EX31_RS04495	0.21	+0.2
8,716	+		EX31_RS04495	0.21	-0.7
8,716	+		EX31_RS04495	0.21	-1.1
8,717	-		EX31_RS04495	0.21	-0.9
8,717	-		EX31_RS04495	0.21	-0.0
8,717	-		EX31_RS04495	0.21	-0.2
8,717	-		EX31_RS04495	0.21	-0.6
8,737	+		EX31_RS04495	0.22	-0.5
8,737	+		EX31_RS04495	0.22	-1.0
8,737	+		EX31_RS04495	0.22	-0.8
8,737	+		EX31_RS04495	0.22	-0.4
8,738	-		EX31_RS04495	0.22	-0.9
8,738	-		EX31_RS04495	0.22	-0.1
8,738	-		EX31_RS04495	0.22	-0.2
8,740	+		EX31_RS04495	0.22	-0.0
8,740	+		EX31_RS04495	0.22	-0.9
8,740	+		EX31_RS04495	0.22	+0.3
8,741	-		EX31_RS04495	0.22	+0.4
8,741	-		EX31_RS04495	0.22	-0.4
8,780	+		EX31_RS04495	0.24	-0.9
8,780	+		EX31_RS04495	0.24	+0.2
8,780	+		EX31_RS04495	0.24	+0.1
8,805	+		EX31_RS04495	0.26	+1.0
8,805	+		EX31_RS04495	0.26	+0.4
8,806	-		EX31_RS04495	0.26	+0.6
8,808	+		EX31_RS04495	0.26	+0.6
8,808	+		EX31_RS04495	0.26	+0.7
8,808	+		EX31_RS04495	0.26	-0.1
8,808	+		EX31_RS04495	0.26	+0.8
8,808	+		EX31_RS04495	0.26	-0.2
8,809	-		EX31_RS04495	0.26	-0.4
8,809	-		EX31_RS04495	0.26	+0.4
8,818	-		EX31_RS04495	0.26	+1.3
8,824	-		EX31_RS04495	0.27	+0.3
8,870	-		EX31_RS04495	0.29	-0.7
8,870	-		EX31_RS04495	0.29	+1.1
8,935	+		EX31_RS04495	0.33	-0.2
8,935	+		EX31_RS04495	0.33	+0.3
8,935	+		EX31_RS04495	0.33	+0.2
8,935	+		EX31_RS04495	0.33	+0.6
8,935	+		EX31_RS04495	0.33	+0.3
8,935	+		EX31_RS04495	0.33	-1.3
8,936	-		EX31_RS04495	0.33	-0.3
8,998	-		EX31_RS04495	0.36	-0.1
9,057	-		EX31_RS04495	0.40	-0.3
9,203	+		EX31_RS04495	0.48	-0.7
9,203	+		EX31_RS04495	0.48	-1.0
9,203	+		EX31_RS04495	0.48	+0.3
9,204	-		EX31_RS04495	0.48	+0.4
9,204	-		EX31_RS04495	0.48	+0.1
9,219	+		EX31_RS04495	0.49	+1.4
9,219	+		EX31_RS04495	0.49	-0.2
9,219	+		EX31_RS04495	0.49	+0.1
9,236	+		EX31_RS04495	0.50	+0.1
9,236	+		EX31_RS04495	0.50	+0.6
9,236	+		EX31_RS04495	0.50	+0.2
9,237	-		EX31_RS04495	0.50	-1.2