Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS00690 and EX31_RS00695 are separated by 94 nucleotides EX31_RS00695 and EX31_RS00700 are separated by 18 nucleotides EX31_RS00700 and EX31_RS00705 overlap by 4 nucleotides
EX31_RS00690: EX31_RS00690 - ABC transporter substrate-binding protein, at 145,725 to 147,269
_RS00690
EX31_RS00695: EX31_RS00695 - ABC transporter permease, at 147,364 to 148,302
_RS00695
EX31_RS00700: EX31_RS00700 - ABC transporter permease, at 148,321 to 149,136
_RS00700
EX31_RS00705: EX31_RS00705 - ABC transporter ATP-binding protein, at 149,133 to 150,722
_RS00705
Position (kb) 147
148
149 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 146.364 kb on + strand, within EX31_RS00690 at 146.365 kb on - strand, within EX31_RS00690 at 146.365 kb on - strand, within EX31_RS00690 at 146.507 kb on + strand, within EX31_RS00690 at 146.508 kb on - strand, within EX31_RS00690 at 146.543 kb on + strand, within EX31_RS00690 at 146.543 kb on + strand, within EX31_RS00690 at 146.543 kb on + strand, within EX31_RS00690 at 146.550 kb on + strand, within EX31_RS00690 at 146.550 kb on + strand, within EX31_RS00690 at 146.551 kb on - strand, within EX31_RS00690 at 146.552 kb on + strand, within EX31_RS00690 at 146.616 kb on + strand, within EX31_RS00690 at 146.617 kb on - strand, within EX31_RS00690 at 146.681 kb on + strand, within EX31_RS00690 at 146.736 kb on + strand, within EX31_RS00690 at 146.737 kb on - strand, within EX31_RS00690 at 146.921 kb on + strand, within EX31_RS00690 at 146.921 kb on + strand, within EX31_RS00690 at 146.921 kb on + strand, within EX31_RS00690 at 147.105 kb on + strand, within EX31_RS00690 at 147.105 kb on + strand, within EX31_RS00690 at 147.159 kb on + strand at 147.160 kb on - strand at 147.160 kb on - strand at 147.282 kb on + strand at 147.282 kb on + strand at 147.283 kb on - strand at 147.293 kb on + strand at 147.734 kb on + strand, within EX31_RS00695 at 147.735 kb on - strand, within EX31_RS00695 at 147.741 kb on + strand, within EX31_RS00695 at 147.741 kb on + strand, within EX31_RS00695 at 147.855 kb on + strand, within EX31_RS00695 at 147.855 kb on + strand, within EX31_RS00695 at 147.856 kb on - strand, within EX31_RS00695 at 147.868 kb on - strand, within EX31_RS00695 at 147.940 kb on - strand, within EX31_RS00695 at 147.988 kb on + strand, within EX31_RS00695 at 147.988 kb on + strand, within EX31_RS00695 at 147.988 kb on + strand, within EX31_RS00695 at 147.988 kb on + strand, within EX31_RS00695 at 147.989 kb on - strand, within EX31_RS00695 at 147.989 kb on - strand, within EX31_RS00695 at 147.989 kb on - strand, within EX31_RS00695 at 147.989 kb on - strand, within EX31_RS00695 at 148.047 kb on - strand, within EX31_RS00695 at 148.047 kb on - strand, within EX31_RS00695 at 148.133 kb on + strand, within EX31_RS00695 at 148.133 kb on + strand, within EX31_RS00695 at 148.133 kb on + strand, within EX31_RS00695 at 148.134 kb on - strand, within EX31_RS00695 at 148.134 kb on - strand, within EX31_RS00695 at 148.159 kb on + strand, within EX31_RS00695 at 148.159 kb on + strand, within EX31_RS00695 at 148.159 kb on + strand, within EX31_RS00695 at 148.159 kb on + strand, within EX31_RS00695 at 148.159 kb on + strand, within EX31_RS00695 at 148.159 kb on + strand, within EX31_RS00695 at 148.159 kb on + strand, within EX31_RS00695 at 148.159 kb on + strand, within EX31_RS00695 at 148.160 kb on - strand, within EX31_RS00695 at 148.160 kb on - strand, within EX31_RS00695 at 148.160 kb on - strand, within EX31_RS00695 at 148.231 kb on + strand at 148.232 kb on - strand at 148.232 kb on - strand at 148.232 kb on - strand at 148.309 kb on - strand at 148.346 kb on + strand at 148.346 kb on + strand at 148.374 kb on + strand at 148.479 kb on + strand, within EX31_RS00700 at 148.578 kb on + strand, within EX31_RS00700 at 148.579 kb on - strand, within EX31_RS00700 at 148.579 kb on - strand, within EX31_RS00700 at 148.956 kb on + strand, within EX31_RS00700 at 149.146 kb on + strand at 149.146 kb on + strand at 149.146 kb on + strand at 149.146 kb on + strand at 149.147 kb on - strand at 149.147 kb on - strand at 149.147 kb on - strand at 149.166 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 146,364 + EX31_RS00690 0.41 +1.1 146,365 - EX31_RS00690 0.41 +1.0 146,365 - EX31_RS00690 0.41 +0.2 146,507 + EX31_RS00690 0.51 -0.9 146,508 - EX31_RS00690 0.51 -0.5 146,543 + EX31_RS00690 0.53 +1.0 146,543 + EX31_RS00690 0.53 +0.1 146,543 + EX31_RS00690 0.53 -0.5 146,550 + EX31_RS00690 0.53 +0.5 146,550 + EX31_RS00690 0.53 +0.5 146,551 - EX31_RS00690 0.53 -0.5 146,552 + EX31_RS00690 0.54 -1.6 146,616 + EX31_RS00690 0.58 -0.9 146,617 - EX31_RS00690 0.58 -0.1 146,681 + EX31_RS00690 0.62 +0.0 146,736 + EX31_RS00690 0.65 -0.1 146,737 - EX31_RS00690 0.66 -1.1 146,921 + EX31_RS00690 0.77 -1.5 146,921 + EX31_RS00690 0.77 +0.2 146,921 + EX31_RS00690 0.77 +0.8 147,105 + EX31_RS00690 0.89 -1.0 147,105 + EX31_RS00690 0.89 +0.3 147,159 + +0.3 147,160 - +0.3 147,160 - +1.1 147,282 + +0.8 147,282 + -0.9 147,283 - -0.1 147,293 + -0.1 147,734 + EX31_RS00695 0.39 +0.3 147,735 - EX31_RS00695 0.40 +0.4 147,741 + EX31_RS00695 0.40 +0.0 147,741 + EX31_RS00695 0.40 -1.7 147,855 + EX31_RS00695 0.52 -0.7 147,855 + EX31_RS00695 0.52 +0.1 147,856 - EX31_RS00695 0.52 -0.3 147,868 - EX31_RS00695 0.54 -0.8 147,940 - EX31_RS00695 0.61 +2.5 147,988 + EX31_RS00695 0.66 -1.2 147,988 + EX31_RS00695 0.66 -0.3 147,988 + EX31_RS00695 0.66 +0.8 147,988 + EX31_RS00695 0.66 +1.0 147,989 - EX31_RS00695 0.67 +0.7 147,989 - EX31_RS00695 0.67 +0.5 147,989 - EX31_RS00695 0.67 +0.6 147,989 - EX31_RS00695 0.67 +0.5 148,047 - EX31_RS00695 0.73 -0.9 148,047 - EX31_RS00695 0.73 -0.2 148,133 + EX31_RS00695 0.82 +1.6 148,133 + EX31_RS00695 0.82 -0.0 148,133 + EX31_RS00695 0.82 +0.2 148,134 - EX31_RS00695 0.82 -2.9 148,134 - EX31_RS00695 0.82 -0.4 148,159 + EX31_RS00695 0.85 -1.0 148,159 + EX31_RS00695 0.85 -0.9 148,159 + EX31_RS00695 0.85 +0.3 148,159 + EX31_RS00695 0.85 -2.5 148,159 + EX31_RS00695 0.85 +0.3 148,159 + EX31_RS00695 0.85 -0.9 148,159 + EX31_RS00695 0.85 -1.3 148,159 + EX31_RS00695 0.85 +0.1 148,160 - EX31_RS00695 0.85 -0.4 148,160 - EX31_RS00695 0.85 -0.2 148,160 - EX31_RS00695 0.85 +0.8 148,231 + -0.2 148,232 - -2.0 148,232 - -0.1 148,232 - -2.3 148,309 - -0.3 148,346 + +0.7 148,346 + -0.4 148,374 + -0.2 148,479 + EX31_RS00700 0.19 -0.1 148,578 + EX31_RS00700 0.31 -0.4 148,579 - EX31_RS00700 0.32 -0.1 148,579 - EX31_RS00700 0.32 +0.7 148,956 + EX31_RS00700 0.78 +0.3 149,146 + +0.4 149,146 + +0.8 149,146 + -0.1 149,146 + +0.1 149,147 - -1.6 149,147 - +0.0 149,147 - +0.7 149,166 + -1.9
Or see this region's nucleotide sequence